RNA–Protein interactions for RNA: ENST00000486263.1

NELFCD-209, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-209ENST00000486263 LCE1DQ5T752 114 aa5.38□□□□□ -1.55
NELFCD-209ENST00000486263 LCE4AQ5TA78 99 aa5.35□□□□□ -1.55
NELFCD-209ENST00000486263 KRTAP5-3Q6L8H2 238 aa5.33□□□□□ -1.56
NELFCD-209ENST00000486263 SPRR2FQ96RM1 72 aa5.31□□□□□ -1.56
NELFCD-209ENST00000486263 KRTAP4-9Q9BYQ8 210 aa5.31□□□□□ -1.56
NELFCD-209ENST00000486263 LCE3AQ5TA76 89 aa5.3□□□□□ -1.56
NELFCD-209ENST00000486263 KRTAP23-1A1A580 65 aa5.26□□□□□ -1.57
NELFCD-209ENST00000486263 KRTAP20-1Q3LI63 56 aa5.24□□□□□ -1.57
NELFCD-209ENST00000486263 SPRR2EP22531 72 aa5.21□□□□□ -1.58
NELFCD-209ENST00000486263 SPRR2BP35325 72 aa5.21□□□□□ -1.58
NELFCD-209ENST00000486263 SPRR2AP35326 72 aa5.21□□□□□ -1.58
NELFCD-209ENST00000486263 PP632Q6XCG6 107 aa5.2□□□□□ -1.58
NELFCD-209ENST00000486263 KRTAP19-5Q3LI72 72 aa5.18□□□□□ -1.58
NELFCD-209ENST00000486263 LCE1AQ5T7P2 110 aa5.17□□□□□ -1.58
NELFCD-209ENST00000486263 KRTAP2-3P0C7H8 128 aa5.16□□□□□ -1.58
NELFCD-209ENST00000486263 KRTAP2-4Q9BYR9 128 aa5.16□□□□□ -1.58
NELFCD-209ENST00000486263 KRTAP19-7Q3SYF9 63 aa5.14□□□□□ -1.59
NELFCD-209ENST00000486263 KRTAP12-3P60328 96 aa5.11□□□□□ -1.59
NELFCD-209ENST00000486263 MT1EP04732 61 aa5.09□□□□□ -1.59
NELFCD-209ENST00000486263 SPRR2DP22532 72 aa5.04□□□□□ -1.6
NELFCD-209ENST00000486263 KTN1-AS1Q86SY8 53 aa5.04□□□□□ -1.6
NELFCD-209ENST00000486263 PRAC1Q96KF2 57 aa5.03□□□□□ -1.6
NELFCD-209ENST00000486263 KRTAP4-11Q9BYQ6 195 aa5.02□□□□□ -1.61
NELFCD-209ENST00000486263 KRTAP2-2Q9BYT5 123 aa4.99□□□□□ -1.61
NELFCD-209ENST00000486263 KRTAP2-1Q9BYU5 128 aa4.99□□□□□ -1.61
NELFCD-209ENST00000486263 LCE5AQ5TCM9 118 aa4.98□□□□□ -1.61
NELFCD-209ENST00000486263 KRTAP19-3Q7Z4W3 81 aa4.97□□□□□ -1.61
NELFCD-209ENST00000486263 SVIPQ8NHG7 77 aa4.96□□□□□ -1.62
NELFCD-209ENST00000486263 KRTAP15-1Q3LI76 137 aa4.95□□□□□ -1.62
NELFCD-209ENST00000486263 MT1LQ93083 61 aa4.95□□□□□ -1.62
NELFCD-209ENST00000486263 MT1GP13640 62 aa4.91□□□□□ -1.62
NELFCD-209ENST00000486263 MT1MQ8N339 61 aa4.82□□□□□ -1.64
NELFCD-209ENST00000486263 LCE3CQ5T5A8 94 aa4.75□□□□□ -1.65
NELFCD-209ENST00000486263 DSTQ03001 7570 aaKnown RBP4.74□□□□□ -1.65
NELFCD-209ENST00000486263 KRTAP4-3Q9BYR4 195 aa4.69□□□□□ -1.66
NELFCD-209ENST00000486263 GPR98Q8WXG9 6306 aa4.66□□□□□ -1.66
NELFCD-209ENST00000486263 KRTAP5-4Q6L8H1 288 aa4.44□□□□□ -1.7
NELFCD-209ENST00000486263 HMCN1Q96RW7 5635 aa4.41□□□□□ -1.7
NELFCD-209ENST00000486263 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
NELFCD-209ENST00000486263 SPRR5A0A1B0GTR4 108 aa4.39□□□□□ -1.71
NELFCD-209ENST00000486263 A0A0A0MQY5 61 aa4.38□□□□□ -1.71
NELFCD-209ENST00000486263 MT4P47944 62 aa4.37□□□□□ -1.71
NELFCD-209ENST00000486263 KRTAP5-5Q701N2 237 aaPredicted RBP4.33□□□□□ -1.72
NELFCD-209ENST00000486263 AHNAK2Q8IVF2 5795 aa4.28□□□□□ -1.72
NELFCD-209ENST00000486263 LUZP6Q538Z0 58 aa4.25□□□□□ -1.73
NELFCD-209ENST00000486263 MT1AP04731 61 aa4.22□□□□□ -1.73
NELFCD-209ENST00000486263 KRTAP12-4P60329 112 aa4.2□□□□□ -1.74
NELFCD-209ENST00000486263 KRTAP6-1Q3LI64 71 aa4.16□□□□□ -1.74
NELFCD-209ENST00000486263 SYNE1Q8NF91 8797 aaKnown RBP4.16□□□□□ -1.74
NELFCD-209ENST00000486263 KRTAP20-2Q3LI61 65 aa4.15□□□□□ -1.75
NELFCD-209ENST00000486263 KRTAP5-10Q6L8G5 202 aa4.11□□□□□ -1.75
NELFCD-209ENST00000486263 KRTAP5-7Q6L8G8 165 aa3.95□□□□□ -1.78
NELFCD-209ENST00000486263 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.79
NELFCD-209ENST00000486263 KRTAP5-2Q701N4 177 aa3.9□□□□□ -1.79
NELFCD-209ENST00000486263 NDUFAF8A1L188 74 aa3.87□□□□□ -1.79
NELFCD-209ENST00000486263 MT3P25713 68 aa3.87□□□□□ -1.79
NELFCD-209ENST00000486263 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.81□□□□□ -1.8
NELFCD-209ENST00000486263 KRTAP5-8O75690 187 aa3.65□□□□□ -1.83
NELFCD-209ENST00000486263 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
NELFCD-209ENST00000486263 LCE3DQ9BYE3 92 aa3.54□□□□□ -1.84
NELFCD-209ENST00000486263 AHNAKQ09666 5890 aaKnown RBP3.54□□□□□ -1.84
NELFCD-209ENST00000486263 MUC5BQ9HC84 5762 aaPredicted RBP3.52□□□□□ -1.85
NELFCD-209ENST00000486263 MUC5ACP98088 5654 aa3.51□□□□□ -1.85
NELFCD-209ENST00000486263 KRTAP5-1Q6L8H4 278 aa3.47□□□□□ -1.85
NELFCD-209ENST00000486263 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
NELFCD-209ENST00000486263 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
NELFCD-209ENST00000486263 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
NELFCD-209ENST00000486263 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
NELFCD-209ENST00000486263 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
NELFCD-209ENST00000486263 INE1O15225 51 aa3.2□□□□□ -1.9
NELFCD-209ENST00000486263 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
NELFCD-209ENST00000486263 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
NELFCD-209ENST00000486263 PRM1P04553 51 aa2.82□□□□□ -1.96
NELFCD-209ENST00000486263 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
NELFCD-209ENST00000486263 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
NELFCD-209ENST00000486263 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
NELFCD-209ENST00000486263 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
NELFCD-209ENST00000486263 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 6.3 ms