RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 LCE1AQ5T7P2 110 aa5.03□□□□□ -1.6
HMG20B-211ENST00000486028 C10orf95Q9H7T3 257 aa5.03□□□□□ -1.6
HMG20B-211ENST00000486028 KMT2DO14686 5537 aa5.03□□□□□ -1.6
HMG20B-211ENST00000486028 MUC12Q9UKN1 5478 aa5.03□□□□□ -1.6
HMG20B-211ENST00000486028 KRTAP4-8A0A0G2JLE6 195 aa5□□□□□ -1.61
HMG20B-211ENST00000486028 KRTAP8-1Q8IUC2 63 aa4.99□□□□□ -1.61
HMG20B-211ENST00000486028 KRTAP10-7P60409 375 aaPredicted RBP4.97□□□□□ -1.61
HMG20B-211ENST00000486028 MDN1Q9NU22 5596 aa4.96□□□□□ -1.61
HMG20B-211ENST00000486028 KRTAP10-12P60413 245 aa4.96□□□□□ -1.62
HMG20B-211ENST00000486028 SPRR2FQ96RM1 72 aa4.95□□□□□ -1.62
HMG20B-211ENST00000486028 KRTAP4-9Q9BYQ8 210 aa4.86□□□□□ -1.63
HMG20B-211ENST00000486028 SPRR2EP22531 72 aa4.85□□□□□ -1.63
HMG20B-211ENST00000486028 SPRR2BP35325 72 aa4.85□□□□□ -1.63
HMG20B-211ENST00000486028 SPRR2AP35326 72 aa4.85□□□□□ -1.63
HMG20B-211ENST00000486028 KRTAP4-11Q9BYQ6 195 aa4.81□□□□□ -1.64
HMG20B-211ENST00000486028 KRTAP20-1Q3LI63 56 aa4.8□□□□□ -1.64
HMG20B-211ENST00000486028 KRTAP4-7Q9BYR0 210 aa4.78□□□□□ -1.64
HMG20B-211ENST00000486028 LUZP6Q538Z0 58 aa4.76□□□□□ -1.65
HMG20B-211ENST00000486028 KRTAP2-3P0C7H8 128 aa4.73□□□□□ -1.65
HMG20B-211ENST00000486028 KRTAP2-4Q9BYR9 128 aa4.73□□□□□ -1.65
HMG20B-211ENST00000486028 PP632Q6XCG6 107 aa4.72□□□□□ -1.65
HMG20B-211ENST00000486028 SPRR2DP22532 72 aa4.69□□□□□ -1.66
HMG20B-211ENST00000486028 TNP1P09430 55 aa4.66□□□□□ -1.66
HMG20B-211ENST00000486028 KRTAP19-7Q3SYF9 63 aa4.65□□□□□ -1.67
HMG20B-211ENST00000486028 MT1EP04732 61 aa4.61□□□□□ -1.67
HMG20B-211ENST00000486028 KRTAP19-5Q3LI72 72 aa4.59□□□□□ -1.67
HMG20B-211ENST00000486028 KRTAP2-2Q9BYT5 123 aa4.58□□□□□ -1.68
HMG20B-211ENST00000486028 KRTAP2-1Q9BYU5 128 aa4.58□□□□□ -1.68
HMG20B-211ENST00000486028 LCE1FQ5T754 118 aa4.55□□□□□ -1.68
HMG20B-211ENST00000486028 LCE3AQ5TA76 89 aa4.55□□□□□ -1.68
HMG20B-211ENST00000486028 KRTAP19-3Q7Z4W3 81 aa4.55□□□□□ -1.68
HMG20B-211ENST00000486028 KRTAP4-2Q9BYR5 136 aa4.52□□□□□ -1.69
HMG20B-211ENST00000486028 MT1GP13640 62 aa4.48□□□□□ -1.69
HMG20B-211ENST00000486028 SPRR5A0A1B0GTR4 108 aa4.45□□□□□ -1.7
HMG20B-211ENST00000486028 DSTQ03001 7570 aaKnown RBP4.45□□□□□ -1.7
HMG20B-211ENST00000486028 MT1LQ93083 61 aa4.43□□□□□ -1.7
HMG20B-211ENST00000486028 KRTAP12-3P60328 96 aa4.4□□□□□ -1.71
HMG20B-211ENST00000486028 MT1MQ8N339 61 aa4.38□□□□□ -1.71
HMG20B-211ENST00000486028 KRTAP4-3Q9BYR4 195 aa4.26□□□□□ -1.73
HMG20B-211ENST00000486028 LCE3CQ5T5A8 94 aa4.24□□□□□ -1.73
HMG20B-211ENST00000486028 KRTAP5-4Q6L8H1 288 aa4.09□□□□□ -1.75
HMG20B-211ENST00000486028 MT4P47944 62 aa4.08□□□□□ -1.76
HMG20B-211ENST00000486028 GPR98Q8WXG9 6306 aa4.08□□□□□ -1.76
HMG20B-211ENST00000486028 HMCN1Q96RW7 5635 aa4.06□□□□□ -1.76
HMG20B-211ENST00000486028 INE1O15225 51 aa4.04□□□□□ -1.76
HMG20B-211ENST00000486028 KRTAP5-5Q701N2 237 aaPredicted RBP3.99□□□□□ -1.77
HMG20B-211ENST00000486028 KRTAP12-4P60329 112 aa3.91□□□□□ -1.78
HMG20B-211ENST00000486028 KRTAP5-3Q6L8H2 238 aa3.9□□□□□ -1.79
HMG20B-211ENST00000486028 AHNAK2Q8IVF2 5795 aa3.89□□□□□ -1.79
HMG20B-211ENST00000486028 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
HMG20B-211ENST00000486028 KRTAP20-2Q3LI61 65 aa3.85□□□□□ -1.79
HMG20B-211ENST00000486028 SYNE1Q8NF91 8797 aaKnown RBP3.81□□□□□ -1.8
HMG20B-211ENST00000486028 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
HMG20B-211ENST00000486028 MT1AP04731 61 aa3.78□□□□□ -1.8
HMG20B-211ENST00000486028 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
HMG20B-211ENST00000486028 KRTAP5-10Q6L8G5 202 aa3.72□□□□□ -1.81
HMG20B-211ENST00000486028 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
HMG20B-211ENST00000486028 KRTAP5-2Q701N4 177 aa3.61□□□□□ -1.83
HMG20B-211ENST00000486028 KRTAP5-7Q6L8G8 165 aa3.57□□□□□ -1.84
HMG20B-211ENST00000486028 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
HMG20B-211ENST00000486028 LCE3DQ9BYE3 92 aa3.41□□□□□ -1.86
HMG20B-211ENST00000486028 OBSCNQ5VST9 7968 aa3.38□□□□□ -1.87
HMG20B-211ENST00000486028 KRTAP5-8O75690 187 aa3.35□□□□□ -1.87
HMG20B-211ENST00000486028 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
HMG20B-211ENST00000486028 AHNAKQ09666 5890 aaKnown RBP3.21□□□□□ -1.89
HMG20B-211ENST00000486028 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
HMG20B-211ENST00000486028 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
HMG20B-211ENST00000486028 MUC5BQ9HC84 5762 aaPredicted RBP3.17□□□□□ -1.9
HMG20B-211ENST00000486028 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
HMG20B-211ENST00000486028 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
HMG20B-211ENST00000486028 PRM1P04553 51 aa2.82□□□□□ -1.96
HMG20B-211ENST00000486028 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
HMG20B-211ENST00000486028 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
HMG20B-211ENST00000486028 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
HMG20B-211ENST00000486028 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
HMG20B-211ENST00000486028 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
HMG20B-211ENST00000486028 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
HMG20B-211ENST00000486028 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 410.8 ms