RNA–Protein interactions for RNA: ENST00000485946.1

PCCA-209, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 2

Gene PCCA, Length 1,789 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-209ENST00000485946 M0R2T5 61 aa2.66□□□□□ -1.98
PCCA-209ENST00000485946 WFDC13Q8IUB5 93 aa2.66□□□□□ -1.98
PCCA-209ENST00000485946 FLGP20930 4061 aaPredicted RBP2.64□□□□□ -1.99
PCCA-209ENST00000485946 SPRR5A0A1B0GTR4 108 aa2.64□□□□□ -1.99
PCCA-209ENST00000485946 MMP24-AS1A0A0U1RRL7 71 aa2.6□□□□□ -1.99
PCCA-209ENST00000485946 H1FX-AS1Q4G0G2 97 aa2.59□□□□□ -2
PCCA-209ENST00000485946 LCE3CQ5T5A8 94 aa2.57□□□□□ -2
PCCA-209ENST00000485946 KRTAP12-1P59990 96 aa2.56□□□□□ -2
PCCA-209ENST00000485946 MT2AP02795 61 aa2.49□□□□□ -2.01
PCCA-209ENST00000485946 KRTAP10-12P60413 245 aa2.49□□□□□ -2.01
PCCA-209ENST00000485946 KRTAP10-10P60014 251 aa2.48□□□□□ -2.01
PCCA-209ENST00000485946 SSPOA2VEC9 5147 aa2.47□□□□□ -2.01
PCCA-209ENST00000485946 KRTAP10-5P60370 271 aa2.46□□□□□ -2.02
PCCA-209ENST00000485946 MT1FP04733 61 aa2.45□□□□□ -2.02
PCCA-209ENST00000485946 KRTAP6-3Q3LI67 103 aa2.45□□□□□ -2.02
PCCA-209ENST00000485946 USH2AO75445 5202 aa2.45□□□□□ -2.02
PCCA-209ENST00000485946 S4R3F8 94 aa2.44□□□□□ -2.02
PCCA-209ENST00000485946 FCGBPQ9Y6R7 5405 aaPredicted RBP2.41□□□□□ -2.02
PCCA-209ENST00000485946 SYNE2Q8WXH0 6885 aaKnown RBP2.41□□□□□ -2.02
PCCA-209ENST00000485946 MACF1Q9UPN3 7388 aaKnown RBP2.4□□□□□ -2.03
PCCA-209ENST00000485946 KRTAP9-6A8MVA2 160 aa2.39□□□□□ -2.03
PCCA-209ENST00000485946 KRTAP19-6Q3LI70 58 aa2.39□□□□□ -2.03
PCCA-209ENST00000485946 LCE3EQ5T5B0 92 aa2.37□□□□□ -2.03
PCCA-209ENST00000485946 KRTAP12-4P60329 112 aa2.36□□□□□ -2.03
PCCA-209ENST00000485946 SPRR2GQ9BYE4 73 aa2.36□□□□□ -2.03
PCCA-209ENST00000485946 KRTAP19-8Q3LI54 63 aa2.33□□□□□ -2.04
PCCA-209ENST00000485946 GPR98Q8WXG9 6306 aa2.31□□□□□ -2.04
PCCA-209ENST00000485946 NEBP20929 6669 aa2.29□□□□□ -2.04
PCCA-209ENST00000485946 A0A0D9SG42 100 aa2.28□□□□□ -2.04
PCCA-209ENST00000485946 KRTAP20-1Q3LI63 56 aa2.28□□□□□ -2.04
PCCA-209ENST00000485946 MT1BP07438 61 aa2.27□□□□□ -2.05
PCCA-209ENST00000485946 MUC12Q9UKN1 5478 aa2.24□□□□□ -2.05
PCCA-209ENST00000485946 M0QZ58 72 aa2.22□□□□□ -2.05
PCCA-209ENST00000485946 LCE3DQ9BYE3 92 aa2.21□□□□□ -2.06
PCCA-209ENST00000485946 KRTAP2-3P0C7H8 128 aa2.2□□□□□ -2.06
PCCA-209ENST00000485946 KRTAP2-4Q9BYR9 128 aa2.2□□□□□ -2.06
PCCA-209ENST00000485946 MDN1Q9NU22 5596 aa2.15□□□□□ -2.06
PCCA-209ENST00000485946 MT1XP80297 61 aa2.13□□□□□ -2.07
PCCA-209ENST00000485946 KRTAP2-1Q9BYU5 128 aa2.11□□□□□ -2.07
PCCA-209ENST00000485946 KRTAP8-1Q8IUC2 63 aa2.09□□□□□ -2.07
PCCA-209ENST00000485946 KMT2DO14686 5537 aa2.09□□□□□ -2.07
PCCA-209ENST00000485946 SPRR2FQ96RM1 72 aa2.06□□□□□ -2.08
PCCA-209ENST00000485946 SPRR2EP22531 72 aa2.03□□□□□ -2.08
PCCA-209ENST00000485946 SPRR2BP35325 72 aa2.03□□□□□ -2.08
PCCA-209ENST00000485946 SPRR2AP35326 72 aa2.03□□□□□ -2.08
PCCA-209ENST00000485946 LCE3AQ5TA76 89 aa2.02□□□□□ -2.09
PCCA-209ENST00000485946 KRTAP12-3P60328 96 aa2□□□□□ -2.09
PCCA-209ENST00000485946 SPRR2DP22532 72 aa1.99□□□□□ -2.09
PCCA-209ENST00000485946 KRTAP5-5Q701N2 237 aaPredicted RBP1.97□□□□□ -2.09
PCCA-209ENST00000485946 MUC5BQ9HC84 5762 aaPredicted RBP1.95□□□□□ -2.1
PCCA-209ENST00000485946 TNP1P09430 55 aa1.95□□□□□ -2.1
PCCA-209ENST00000485946 LCE1CQ5T751 118 aa1.94□□□□□ -2.1
PCCA-209ENST00000485946 LCE1BQ5T7P3 118 aa1.94□□□□□ -2.1
PCCA-209ENST00000485946 AHNAK2Q8IVF2 5795 aa1.92□□□□□ -2.1
PCCA-209ENST00000485946 KRTAP19-7Q3SYF9 63 aa1.91□□□□□ -2.1
PCCA-209ENST00000485946 KRTAP19-3Q7Z4W3 81 aa1.91□□□□□ -2.1
PCCA-209ENST00000485946 MT1EP04732 61 aa1.9□□□□□ -2.1
PCCA-209ENST00000485946 MT1GP13640 62 aa1.9□□□□□ -2.1
PCCA-209ENST00000485946 KRTAP19-5Q3LI72 72 aa1.86□□□□□ -2.11
PCCA-209ENST00000485946 DSTQ03001 7570 aaKnown RBP1.86□□□□□ -2.11
PCCA-209ENST00000485946 MT1LQ93083 61 aa1.82□□□□□ -2.12
PCCA-209ENST00000485946 MT1MQ8N339 61 aa1.82□□□□□ -2.12
PCCA-209ENST00000485946 AHNAKQ09666 5890 aaKnown RBP1.78□□□□□ -2.12
PCCA-209ENST00000485946 KRTAP5-7Q6L8G8 165 aa1.77□□□□□ -2.13
PCCA-209ENST00000485946 KRTAP5-10Q6L8G5 202 aa1.75□□□□□ -2.13
PCCA-209ENST00000485946 MUC19Q7Z5P9 8384 aa1.7□□□□□ -2.14
PCCA-209ENST00000485946 MT4P47944 62 aa1.7□□□□□ -2.14
PCCA-209ENST00000485946 KRTAP20-2Q3LI61 65 aa1.62□□□□□ -2.15
PCCA-209ENST00000485946 PRM1P04553 51 aa1.61□□□□□ -2.15
PCCA-209ENST00000485946 MT1AP04731 61 aa1.59□□□□□ -2.16
PCCA-209ENST00000485946 SYNE1Q8NF91 8797 aaKnown RBP1.58□□□□□ -2.16
PCCA-209ENST00000485946 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
PCCA-209ENST00000485946 KRTAP6-1Q3LI64 71 aa1.52□□□□□ -2.17
PCCA-209ENST00000485946 KRTAP6-2Q3LI66 62 aa1.44□□□□□ -2.18
PCCA-209ENST00000485946 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
PCCA-209ENST00000485946 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
PCCA-209ENST00000485946 PHGR1C9JFL3 82 aa1.04□□□□□ -2.24
PCCA-209ENST00000485946 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 41.3 ms