RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 KRTAP2-4Q9BYR9 128 aa8.54□□□□□ -1.04
ABCF3-216ENST00000485921 LCE5AQ5TCM9 118 aa8.52□□□□□ -1.05
ABCF3-216ENST00000485921 KRTAP12-3P60328 96 aa8.49□□□□□ -1.05
ABCF3-216ENST00000485921 BRK1Q8WUW1 75 aa8.47□□□□□ -1.05
ABCF3-216ENST00000485921 KRTAP23-1A1A580 65 aa8.46□□□□□ -1.06
ABCF3-216ENST00000485921 MT1LQ93083 61 aa8.44□□□□□ -1.06
ABCF3-216ENST00000485921 MT1GP13640 62 aa8.43□□□□□ -1.06
ABCF3-216ENST00000485921 LCE3BQ5TA77 95 aa8.35□□□□□ -1.07
ABCF3-216ENST00000485921 PP632Q6XCG6 107 aa8.35□□□□□ -1.07
ABCF3-216ENST00000485921 KRTAP2-2Q9BYT5 123 aa8.3□□□□□ -1.08
ABCF3-216ENST00000485921 KRTAP2-1Q9BYU5 128 aa8.3□□□□□ -1.08
ABCF3-216ENST00000485921 MT1MQ8N339 61 aa8.29□□□□□ -1.08
ABCF3-216ENST00000485921 DSTQ03001 7570 aaKnown RBP8.17□□□□□ -1.1
ABCF3-216ENST00000485921 KRTAP15-1Q3LI76 137 aa8.1□□□□□ -1.11
ABCF3-216ENST00000485921 KRTAP4-3Q9BYR4 195 aa8.1□□□□□ -1.11
ABCF3-216ENST00000485921 KRTAP4-7Q9BYR0 210 aa8.07□□□□□ -1.12
ABCF3-216ENST00000485921 KRTAP19-4Q3LI73 84 aa8.02□□□□□ -1.13
ABCF3-216ENST00000485921 PMAIP1Q13794 54 aa7.99□□□□□ -1.13
ABCF3-216ENST00000485921 PRO0628Q9UI54 55 aa7.96□□□□□ -1.14
ABCF3-216ENST00000485921 LCE3CQ5T5A8 94 aa7.86□□□□□ -1.15
ABCF3-216ENST00000485921 LCE4AQ5TA78 99 aa7.65□□□□□ -1.18
ABCF3-216ENST00000485921 KRTAP4-9Q9BYQ8 210 aa7.65□□□□□ -1.18
ABCF3-216ENST00000485921 LOC100996750A0A140TA64 210 aa7.63□□□□□ -1.19
ABCF3-216ENST00000485921 KRTAP5-4Q6L8H1 288 aa7.6□□□□□ -1.19
ABCF3-216ENST00000485921 SVIPQ8NHG7 77 aa7.58□□□□□ -1.2
ABCF3-216ENST00000485921 PRAC1Q96KF2 57 aa7.58□□□□□ -1.2
ABCF3-216ENST00000485921 KRTAP5-5Q701N2 237 aaPredicted RBP7.55□□□□□ -1.2
ABCF3-216ENST00000485921 LCE1DQ5T752 114 aa7.52□□□□□ -1.21
ABCF3-216ENST00000485921 MT4P47944 62 aa7.51□□□□□ -1.21
ABCF3-216ENST00000485921 KRTAP9-6A8MVA2 160 aa7.4□□□□□ -1.22
ABCF3-216ENST00000485921 HMCN1Q96RW7 5635 aa7.37□□□□□ -1.23
ABCF3-216ENST00000485921 KRTAP4-6Q9BYQ5 205 aa7.36□□□□□ -1.23
ABCF3-216ENST00000485921 KTN1-AS1Q86SY8 53 aa7.35□□□□□ -1.23
ABCF3-216ENST00000485921 KRTAP12-4P60329 112 aa7.24□□□□□ -1.25
ABCF3-216ENST00000485921 SYNE1Q8NF91 8797 aaKnown RBP7.22□□□□□ -1.25
ABCF3-216ENST00000485921 MT1AP04731 61 aa7.2□□□□□ -1.26
ABCF3-216ENST00000485921 SPRR5A0A1B0GTR4 108 aa7.16□□□□□ -1.26
ABCF3-216ENST00000485921 KRTAP20-2Q3LI61 65 aa7.15□□□□□ -1.26
ABCF3-216ENST00000485921 KRTAP6-1Q3LI64 71 aa7.13□□□□□ -1.27
ABCF3-216ENST00000485921 GPR98Q8WXG9 6306 aa6.96□□□□□ -1.3
ABCF3-216ENST00000485921 AHNAK2Q8IVF2 5795 aa6.94□□□□□ -1.3
ABCF3-216ENST00000485921 KRTAP5-3Q6L8H2 238 aa6.91□□□□□ -1.3
ABCF3-216ENST00000485921 KRTAP9-4Q9BYQ2 154 aa6.91□□□□□ -1.3
ABCF3-216ENST00000485921 KRTAP5-2Q701N4 177 aa6.75□□□□□ -1.33
ABCF3-216ENST00000485921 KRTAP5-10Q6L8G5 202 aa6.72□□□□□ -1.33
ABCF3-216ENST00000485921 KRTAP6-2Q3LI66 62 aa6.71□□□□□ -1.34
ABCF3-216ENST00000485921 MT3P25713 68 aa6.56□□□□□ -1.36
ABCF3-216ENST00000485921 KRTAP4-11Q9BYQ6 195 aa6.4□□□□□ -1.38
ABCF3-216ENST00000485921 KRTAP5-7Q6L8G8 165 aa6.38□□□□□ -1.39
ABCF3-216ENST00000485921 LUZP6Q538Z0 58 aa6.31□□□□□ -1.4
ABCF3-216ENST00000485921 OBSCNQ5VST9 7968 aa6.23□□□□□ -1.41
ABCF3-216ENST00000485921 KRTAP5-8O75690 187 aa6.18□□□□□ -1.42
ABCF3-216ENST00000485921 KRTAP5-1Q6L8H4 278 aa5.96□□□□□ -1.46
ABCF3-216ENST00000485921 LCE1EQ5T753 118 aa5.89□□□□□ -1.47
ABCF3-216ENST00000485921 MUC5ACP98088 5654 aa5.81□□□□□ -1.48
ABCF3-216ENST00000485921 LCE3DQ9BYE3 92 aa5.77□□□□□ -1.49
ABCF3-216ENST00000485921 KRTAP9-9Q9BYP9 154 aa5.77□□□□□ -1.49
ABCF3-216ENST00000485921 NDUFAF8A1L188 74 aa5.66□□□□□ -1.5
ABCF3-216ENST00000485921 MUC5BQ9HC84 5762 aaPredicted RBP5.6□□□□□ -1.51
ABCF3-216ENST00000485921 AHNAKQ09666 5890 aaKnown RBP5.54□□□□□ -1.52
ABCF3-216ENST00000485921 LCE1BQ5T7P3 118 aa5.53□□□□□ -1.52
ABCF3-216ENST00000485921 LCE3EQ5T5B0 92 aa5.52□□□□□ -1.53
ABCF3-216ENST00000485921 KRTAP4-2Q9BYR5 136 aa5.52□□□□□ -1.53
ABCF3-216ENST00000485921 LCE1CQ5T751 118 aa5.47□□□□□ -1.53
ABCF3-216ENST00000485921 A0A0A0MQY5 61 aa5.2□□□□□ -1.58
ABCF3-216ENST00000485921 H3BS24 57 aa5.17□□□□□ -1.58
ABCF3-216ENST00000485921 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.03□□□□□ -1.6
ABCF3-216ENST00000485921 KRTAP5-11Q6L8G4 156 aa4.9□□□□□ -1.63
ABCF3-216ENST00000485921 INE1O15225 51 aa4.86□□□□□ -1.63
ABCF3-216ENST00000485921 KRTAP4-12Q9BQ66 201 aa4.85□□□□□ -1.63
ABCF3-216ENST00000485921 KRTAP21-2Q3LI59 83 aa4.69□□□□□ -1.66
ABCF3-216ENST00000485921 LCE1FQ5T754 118 aa4.65□□□□□ -1.67
ABCF3-216ENST00000485921 PRM1P04553 51 aa4.43□□□□□ -1.7
ABCF3-216ENST00000485921 KRTAP4-4Q9BYR3 166 aa4.24□□□□□ -1.73
ABCF3-216ENST00000485921 PHGR1C9JFL3 82 aa4.23□□□□□ -1.73
ABCF3-216ENST00000485921 MUC19Q7Z5P9 8384 aa3.82□□□□□ -1.8
ABCF3-216ENST00000485921 KRTAP21-1Q3LI58 79 aa2.94□□□□□ -1.94
ABCF3-216ENST00000485921 MUC16Q8WXI7 14507 aa2.79□□□□□ -1.96
Retrieved 78 of 20,778 RNA–protein pairs in 13.1 ms