RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 PRR15LQ9BU68 103 aa6.31□□□□□ -1.4
SMC4-216ENST00000485645 GPR98Q8WXG9 6306 aa6.31□□□□□ -1.4
SMC4-216ENST00000485645 LINC01558Q9Y6Z2 57 aa6.29□□□□□ -1.4
SMC4-216ENST00000485645 A8MU10 97 aa6.27□□□□□ -1.41
SMC4-216ENST00000485645 KRTAP5-3Q6L8H2 238 aa6.26□□□□□ -1.41
SMC4-216ENST00000485645 KRTAP19-5Q3LI72 72 aa6.23□□□□□ -1.41
SMC4-216ENST00000485645 MT1GP13640 62 aa6.22□□□□□ -1.41
SMC4-216ENST00000485645 PP632Q6XCG6 107 aa6.19□□□□□ -1.42
SMC4-216ENST00000485645 UQCR11O14957 56 aa6.12□□□□□ -1.43
SMC4-216ENST00000485645 MT1MQ8N339 61 aa6.11□□□□□ -1.43
SMC4-216ENST00000485645 MT1LQ93083 61 aa6.08□□□□□ -1.44
SMC4-216ENST00000485645 C10orf95Q9H7T3 257 aa6.07□□□□□ -1.44
SMC4-216ENST00000485645 HMCN1Q96RW7 5635 aa6.06□□□□□ -1.44
SMC4-216ENST00000485645 MT4P47944 62 aa6.05□□□□□ -1.44
SMC4-216ENST00000485645 TNP1P09430 55 aa6.03□□□□□ -1.44
SMC4-216ENST00000485645 KRTAP23-1A1A580 65 aa6.01□□□□□ -1.45
SMC4-216ENST00000485645 V9GYY9 64 aa6.01□□□□□ -1.45
SMC4-216ENST00000485645 LCE3AQ5TA76 89 aa6□□□□□ -1.45
SMC4-216ENST00000485645 MIR22HGQ0VDD5 57 aa5.98□□□□□ -1.45
SMC4-216ENST00000485645 Q1T7F1 81 aa5.97□□□□□ -1.45
SMC4-216ENST00000485645 PCP4P48539 62 aa5.96□□□□□ -1.46
SMC4-216ENST00000485645 KRTAP4-3Q9BYR4 195 aa5.96□□□□□ -1.46
SMC4-216ENST00000485645 KRTAP15-1Q3LI76 137 aa5.95□□□□□ -1.46
SMC4-216ENST00000485645 PSPHP1O15172 72 aa5.94□□□□□ -1.46
SMC4-216ENST00000485645 AHNAK2Q8IVF2 5795 aa5.93□□□□□ -1.46
SMC4-216ENST00000485645 KRTAP5-4Q6L8H1 288 aa5.93□□□□□ -1.46
SMC4-216ENST00000485645 K7ERS5 55 aa5.85□□□□□ -1.47
SMC4-216ENST00000485645 RPS28P62857 69 aaKnown RBP5.8□□□□□ -1.48
SMC4-216ENST00000485645 KRTAP5-10Q6L8G5 202 aa5.79□□□□□ -1.48
SMC4-216ENST00000485645 KRTAP12-3P60328 96 aa5.77□□□□□ -1.49
SMC4-216ENST00000485645 KRTAP25-1Q3LHN0 102 aa5.77□□□□□ -1.49
SMC4-216ENST00000485645 A6NED7 52 aa5.75□□□□□ -1.49
SMC4-216ENST00000485645 KRTAP20-2Q3LI61 65 aa5.62□□□□□ -1.51
SMC4-216ENST00000485645 KRTAP5-5Q701N2 237 aaPredicted RBP5.61□□□□□ -1.51
SMC4-216ENST00000485645 KRTAP5-7Q6L8G8 165 aa5.59□□□□□ -1.51
SMC4-216ENST00000485645 SPRR5A0A1B0GTR4 108 aa5.57□□□□□ -1.52
SMC4-216ENST00000485645 CDC42SE1Q9NRR8 79 aa5.55□□□□□ -1.52
SMC4-216ENST00000485645 KRTAP12-4P60329 112 aa5.54□□□□□ -1.52
SMC4-216ENST00000485645 SYNE1Q8NF91 8797 aaKnown RBP5.49□□□□□ -1.53
SMC4-216ENST00000485645 ROMO1P60602 79 aa5.48□□□□□ -1.53
SMC4-216ENST00000485645 LCE3CQ5T5A8 94 aa5.3□□□□□ -1.56
SMC4-216ENST00000485645 MT1AP04731 61 aa5.17□□□□□ -1.58
SMC4-216ENST00000485645 KRTAP6-1Q3LI64 71 aa5.15□□□□□ -1.59
SMC4-216ENST00000485645 KRTAP5-2Q701N4 177 aa5.15□□□□□ -1.59
SMC4-216ENST00000485645 BRK1Q8WUW1 75 aa5.07□□□□□ -1.6
SMC4-216ENST00000485645 KRTAP5-8O75690 187 aa5□□□□□ -1.61
SMC4-216ENST00000485645 KRTAP9-6A8MVA2 160 aa4.98□□□□□ -1.61
SMC4-216ENST00000485645 KRTAP6-2Q3LI66 62 aa4.96□□□□□ -1.62
SMC4-216ENST00000485645 OBSCNQ5VST9 7968 aa4.94□□□□□ -1.62
SMC4-216ENST00000485645 AHNAKQ09666 5890 aaKnown RBP4.93□□□□□ -1.62
SMC4-216ENST00000485645 MUC5BQ9HC84 5762 aaPredicted RBP4.91□□□□□ -1.62
SMC4-216ENST00000485645 MUC5ACP98088 5654 aa4.88□□□□□ -1.63
SMC4-216ENST00000485645 PMAIP1Q13794 54 aa4.81□□□□□ -1.64
SMC4-216ENST00000485645 PRO0628Q9UI54 55 aa4.77□□□□□ -1.65
SMC4-216ENST00000485645 MT3P25713 68 aa4.76□□□□□ -1.65
SMC4-216ENST00000485645 KRTAP5-11Q6L8G4 156 aa4.76□□□□□ -1.65
SMC4-216ENST00000485645 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.75□□□□□ -1.65
SMC4-216ENST00000485645 KRTAP5-1Q6L8H4 278 aa4.66□□□□□ -1.66
SMC4-216ENST00000485645 LCE1EQ5T753 118 aa4.61□□□□□ -1.67
SMC4-216ENST00000485645 PRAC1Q96KF2 57 aa4.57□□□□□ -1.68
SMC4-216ENST00000485645 KTN1-AS1Q86SY8 53 aa4.47□□□□□ -1.69
SMC4-216ENST00000485645 SVIPQ8NHG7 77 aa4.19□□□□□ -1.74
SMC4-216ENST00000485645 LCE1BQ5T7P3 118 aa4.17□□□□□ -1.74
SMC4-216ENST00000485645 LCE1CQ5T751 118 aa4.09□□□□□ -1.75
SMC4-216ENST00000485645 LCE1FQ5T754 118 aa4.08□□□□□ -1.76
SMC4-216ENST00000485645 A0A0A0MQY5 61 aa4.06□□□□□ -1.76
SMC4-216ENST00000485645 KRTAP4-4Q9BYR3 166 aa3.95□□□□□ -1.78
SMC4-216ENST00000485645 LUZP6Q538Z0 58 aa3.86□□□□□ -1.79
SMC4-216ENST00000485645 LCE3DQ9BYE3 92 aa3.84□□□□□ -1.79
SMC4-216ENST00000485645 LCE3EQ5T5B0 92 aa3.63□□□□□ -1.83
SMC4-216ENST00000485645 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
SMC4-216ENST00000485645 PHGR1C9JFL3 82 aa3.39□□□□□ -1.87
SMC4-216ENST00000485645 KRTAP21-2Q3LI59 83 aa3.39□□□□□ -1.87
SMC4-216ENST00000485645 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
SMC4-216ENST00000485645 INE1O15225 51 aa2.85□□□□□ -1.95
SMC4-216ENST00000485645 PRM1P04553 51 aa2.8□□□□□ -1.96
SMC4-216ENST00000485645 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
SMC4-216ENST00000485645 MUC16Q8WXI7 14507 aa2.16□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 94.6 ms