RNA–Protein interactions for RNA: ENST00000485545.5

RFC2-208, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-208ENST00000485545 KRTAP19-6Q3LI70 58 aa3.27□□□□□ -1.89
RFC2-208ENST00000485545 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
RFC2-208ENST00000485545 KRTAP10-5P60370 271 aa3.25□□□□□ -1.89
RFC2-208ENST00000485545 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.23□□□□□ -1.89
RFC2-208ENST00000485545 TNP1P09430 55 aa3.22□□□□□ -1.89
RFC2-208ENST00000485545 MT1XP80297 61 aa3.22□□□□□ -1.89
RFC2-208ENST00000485545 C10orf95Q9H7T3 257 aa3.21□□□□□ -1.9
RFC2-208ENST00000485545 FCGBPQ9Y6R7 5405 aaPredicted RBP3.2□□□□□ -1.9
RFC2-208ENST00000485545 PP632Q6XCG6 107 aa3.17□□□□□ -1.9
RFC2-208ENST00000485545 KRTAP10-12P60413 245 aa3.11□□□□□ -1.91
RFC2-208ENST00000485545 MACF1Q9UPN3 7388 aaKnown RBP3.01□□□□□ -1.93
RFC2-208ENST00000485545 KRTAP8-1Q8IUC2 63 aa3.01□□□□□ -1.93
RFC2-208ENST00000485545 SYNE2Q8WXH0 6885 aaKnown RBP3.01□□□□□ -1.93
RFC2-208ENST00000485545 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
RFC2-208ENST00000485545 LCE3AQ5TA76 89 aa2.96□□□□□ -1.94
RFC2-208ENST00000485545 KRTAP12-3P60328 96 aa2.93□□□□□ -1.94
RFC2-208ENST00000485545 KRTAP6-3Q3LI67 103 aa2.92□□□□□ -1.94
RFC2-208ENST00000485545 KMT2DO14686 5537 aa2.91□□□□□ -1.94
RFC2-208ENST00000485545 KRTAP5-9P26371 169 aa2.91□□□□□ -1.94
RFC2-208ENST00000485545 MUC12Q9UKN1 5478 aa2.91□□□□□ -1.94
RFC2-208ENST00000485545 NDUFAF8A1L188 74 aa2.88□□□□□ -1.95
RFC2-208ENST00000485545 KRTAP9-6A8MVA2 160 aa2.88□□□□□ -1.95
RFC2-208ENST00000485545 KRTAP19-5Q3LI72 72 aa2.87□□□□□ -1.95
RFC2-208ENST00000485545 KRTAP19-7Q3SYF9 63 aa2.87□□□□□ -1.95
RFC2-208ENST00000485545 MT1EP04732 61 aa2.85□□□□□ -1.95
RFC2-208ENST00000485545 SPRR2FQ96RM1 72 aa2.84□□□□□ -1.95
RFC2-208ENST00000485545 MDN1Q9NU22 5596 aa2.82□□□□□ -1.96
RFC2-208ENST00000485545 MT1GP13640 62 aa2.8□□□□□ -1.96
RFC2-208ENST00000485545 LCE3CQ5T5A8 94 aa2.8□□□□□ -1.96
RFC2-208ENST00000485545 KRTAP5-1Q6L8H4 278 aa2.8□□□□□ -1.96
RFC2-208ENST00000485545 NEBP20929 6669 aa2.79□□□□□ -1.96
RFC2-208ENST00000485545 KRTAP19-3Q7Z4W3 81 aa2.78□□□□□ -1.96
RFC2-208ENST00000485545 MT1LQ93083 61 aa2.77□□□□□ -1.97
RFC2-208ENST00000485545 LUZP6Q538Z0 58 aa2.76□□□□□ -1.97
RFC2-208ENST00000485545 SPRR5A0A1B0GTR4 108 aa2.74□□□□□ -1.97
RFC2-208ENST00000485545 SPRR2EP22531 72 aa2.73□□□□□ -1.97
RFC2-208ENST00000485545 SPRR2BP35325 72 aa2.73□□□□□ -1.97
RFC2-208ENST00000485545 SPRR2AP35326 72 aa2.73□□□□□ -1.97
RFC2-208ENST00000485545 KRTAP20-1Q3LI63 56 aa2.72□□□□□ -1.97
RFC2-208ENST00000485545 KRTAP5-4Q6L8H1 288 aa2.69□□□□□ -1.98
RFC2-208ENST00000485545 MT1MQ8N339 61 aa2.68□□□□□ -1.98
RFC2-208ENST00000485545 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
RFC2-208ENST00000485545 KRTAP2-3P0C7H8 128 aa2.64□□□□□ -1.99
RFC2-208ENST00000485545 KRTAP2-4Q9BYR9 128 aa2.64□□□□□ -1.99
RFC2-208ENST00000485545 SPRR2DP22532 72 aa2.63□□□□□ -1.99
RFC2-208ENST00000485545 KRTAP2-1Q9BYU5 128 aa2.56□□□□□ -2
RFC2-208ENST00000485545 LCE3EQ5T5B0 92 aa2.55□□□□□ -2
RFC2-208ENST00000485545 DSTQ03001 7570 aaKnown RBP2.53□□□□□ -2
RFC2-208ENST00000485545 KRTAP4-3Q9BYR4 195 aa2.48□□□□□ -2.01
RFC2-208ENST00000485545 KRTAP5-5Q701N2 237 aaPredicted RBP2.45□□□□□ -2.02
RFC2-208ENST00000485545 MT1AP04731 61 aa2.39□□□□□ -2.03
RFC2-208ENST00000485545 GPR98Q8WXG9 6306 aa2.38□□□□□ -2.03
RFC2-208ENST00000485545 KRTAP12-4P60329 112 aa2.38□□□□□ -2.03
RFC2-208ENST00000485545 MT4P47944 62 aa2.34□□□□□ -2.03
RFC2-208ENST00000485545 OBSCNQ5VST9 7968 aa2.33□□□□□ -2.04
RFC2-208ENST00000485545 KRTAP6-1Q3LI64 71 aa2.29□□□□□ -2.04
RFC2-208ENST00000485545 HMCN1Q96RW7 5635 aa2.29□□□□□ -2.04
RFC2-208ENST00000485545 INE1O15225 51 aa2.28□□□□□ -2.04
RFC2-208ENST00000485545 SYNE1Q8NF91 8797 aaKnown RBP2.21□□□□□ -2.05
RFC2-208ENST00000485545 KRTAP20-2Q3LI61 65 aa2.21□□□□□ -2.06
RFC2-208ENST00000485545 AHNAK2Q8IVF2 5795 aa2.2□□□□□ -2.06
RFC2-208ENST00000485545 KRTAP5-2Q701N4 177 aa2.18□□□□□ -2.06
RFC2-208ENST00000485545 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
RFC2-208ENST00000485545 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
RFC2-208ENST00000485545 KRTAP6-2Q3LI66 62 aa2.15□□□□□ -2.07
RFC2-208ENST00000485545 KRTAP5-10Q6L8G5 202 aa2.1□□□□□ -2.07
RFC2-208ENST00000485545 LCE3DQ9BYE3 92 aa2.06□□□□□ -2.08
RFC2-208ENST00000485545 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
RFC2-208ENST00000485545 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
RFC2-208ENST00000485545 AHNAKQ09666 5890 aaKnown RBP1.84□□□□□ -2.11
RFC2-208ENST00000485545 MUC5BQ9HC84 5762 aaPredicted RBP1.8□□□□□ -2.12
RFC2-208ENST00000485545 MUC5ACP98088 5654 aa1.79□□□□□ -2.12
RFC2-208ENST00000485545 PRM1P04553 51 aa1.77□□□□□ -2.13
RFC2-208ENST00000485545 MUC19Q7Z5P9 8384 aa1.65□□□□□ -2.15
RFC2-208ENST00000485545 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
RFC2-208ENST00000485545 PHGR1C9JFL3 82 aa1.37□□□□□ -2.19
RFC2-208ENST00000485545 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
RFC2-208ENST00000485545 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 206.5 ms