RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 SPRR2FQ96RM1 72 aa4.65□□□□□ -1.66
APTX-227ENST00000485479 C10orf95Q9H7T3 257 aa4.6□□□□□ -1.67
APTX-227ENST00000485479 A6NED7 52 aa4.59□□□□□ -1.67
APTX-227ENST00000485479 NEBP20929 6669 aa4.55□□□□□ -1.68
APTX-227ENST00000485479 SPRR2EP22531 72 aa4.52□□□□□ -1.69
APTX-227ENST00000485479 SPRR2BP35325 72 aa4.52□□□□□ -1.69
APTX-227ENST00000485479 SPRR2AP35326 72 aa4.52□□□□□ -1.69
APTX-227ENST00000485479 PRAC1Q96KF2 57 aa4.51□□□□□ -1.69
APTX-227ENST00000485479 KRTAP5-3Q6L8H2 238 aa4.48□□□□□ -1.69
APTX-227ENST00000485479 KRTAP23-1A1A580 65 aa4.47□□□□□ -1.69
APTX-227ENST00000485479 TNP1P09430 55 aa4.47□□□□□ -1.69
APTX-227ENST00000485479 LCE1AQ5T7P2 110 aa4.47□□□□□ -1.69
APTX-227ENST00000485479 K7ERS5 55 aa4.46□□□□□ -1.7
APTX-227ENST00000485479 KRTAP19-7Q3SYF9 63 aa4.46□□□□□ -1.7
APTX-227ENST00000485479 LCE3AQ5TA76 89 aa4.45□□□□□ -1.7
APTX-227ENST00000485479 KRTAP19-5Q3LI72 72 aa4.43□□□□□ -1.7
APTX-227ENST00000485479 MT1EP04732 61 aa4.4□□□□□ -1.71
APTX-227ENST00000485479 LUZP6Q538Z0 58 aa4.38□□□□□ -1.71
APTX-227ENST00000485479 CDC42SE1Q9NRR8 79 aa4.38□□□□□ -1.71
APTX-227ENST00000485479 SPRR2DP22532 72 aa4.35□□□□□ -1.71
APTX-227ENST00000485479 KRTAP20-1Q3LI63 56 aa4.33□□□□□ -1.72
APTX-227ENST00000485479 ROMO1P60602 79 aa4.33□□□□□ -1.72
APTX-227ENST00000485479 KRTAP25-1Q3LHN0 102 aa4.31□□□□□ -1.72
APTX-227ENST00000485479 KRTAP19-3Q7Z4W3 81 aa4.29□□□□□ -1.72
APTX-227ENST00000485479 DSTQ03001 7570 aaKnown RBP4.27□□□□□ -1.73
APTX-227ENST00000485479 KRTAP2-3P0C7H8 128 aa4.25□□□□□ -1.73
APTX-227ENST00000485479 KRTAP2-4Q9BYR9 128 aa4.25□□□□□ -1.73
APTX-227ENST00000485479 KRTAP12-3P60328 96 aa4.24□□□□□ -1.73
APTX-227ENST00000485479 KRTAP15-1Q3LI76 137 aa4.24□□□□□ -1.73
APTX-227ENST00000485479 MT1LQ93083 61 aa4.24□□□□□ -1.73
APTX-227ENST00000485479 MT1GP13640 62 aa4.18□□□□□ -1.74
APTX-227ENST00000485479 MT1MQ8N339 61 aa4.16□□□□□ -1.74
APTX-227ENST00000485479 KRTAP4-3Q9BYR4 195 aa4.16□□□□□ -1.74
APTX-227ENST00000485479 PP632Q6XCG6 107 aa4.13□□□□□ -1.75
APTX-227ENST00000485479 KRTAP2-2Q9BYT5 123 aa4.13□□□□□ -1.75
APTX-227ENST00000485479 KRTAP2-1Q9BYU5 128 aa4.13□□□□□ -1.75
APTX-227ENST00000485479 NDUFAF8A1L188 74 aa4.04□□□□□ -1.76
APTX-227ENST00000485479 LCE3CQ5T5A8 94 aa3.93□□□□□ -1.78
APTX-227ENST00000485479 MT4P47944 62 aa3.84□□□□□ -1.79
APTX-227ENST00000485479 KRTAP5-4Q6L8H1 288 aa3.78□□□□□ -1.8
APTX-227ENST00000485479 KRTAP5-5Q701N2 237 aaPredicted RBP3.78□□□□□ -1.8
APTX-227ENST00000485479 KRTAP9-6A8MVA2 160 aa3.78□□□□□ -1.8
APTX-227ENST00000485479 HMCN1Q96RW7 5635 aa3.76□□□□□ -1.81
APTX-227ENST00000485479 SYNE1Q8NF91 8797 aaKnown RBP3.67□□□□□ -1.82
APTX-227ENST00000485479 GPR98Q8WXG9 6306 aa3.66□□□□□ -1.82
APTX-227ENST00000485479 KRTAP6-1Q3LI64 71 aa3.62□□□□□ -1.83
APTX-227ENST00000485479 KRTAP20-2Q3LI61 65 aa3.6□□□□□ -1.83
APTX-227ENST00000485479 KRTAP12-4P60329 112 aa3.59□□□□□ -1.83
APTX-227ENST00000485479 MT1AP04731 61 aa3.58□□□□□ -1.84
APTX-227ENST00000485479 SPRR5A0A1B0GTR4 108 aa3.53□□□□□ -1.84
APTX-227ENST00000485479 AHNAK2Q8IVF2 5795 aa3.49□□□□□ -1.85
APTX-227ENST00000485479 INE1O15225 51 aa3.43□□□□□ -1.86
APTX-227ENST00000485479 KRTAP6-2Q3LI66 62 aa3.4□□□□□ -1.86
APTX-227ENST00000485479 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.86
APTX-227ENST00000485479 KRTAP5-10Q6L8G5 202 aa3.38□□□□□ -1.87
APTX-227ENST00000485479 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
APTX-227ENST00000485479 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
APTX-227ENST00000485479 KRTAP5-2Q701N4 177 aa3.36□□□□□ -1.87
APTX-227ENST00000485479 MT3P25713 68 aa3.25□□□□□ -1.89
APTX-227ENST00000485479 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
APTX-227ENST00000485479 KRTAP5-7Q6L8G8 165 aa3.18□□□□□ -1.9
APTX-227ENST00000485479 KRTAP5-8O75690 187 aa3.11□□□□□ -1.91
APTX-227ENST00000485479 KRTAP5-1Q6L8H4 278 aa3□□□□□ -1.93
APTX-227ENST00000485479 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
APTX-227ENST00000485479 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
APTX-227ENST00000485479 AHNAKQ09666 5890 aaKnown RBP2.89□□□□□ -1.95
APTX-227ENST00000485479 MUC5ACP98088 5654 aa2.88□□□□□ -1.95
APTX-227ENST00000485479 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
APTX-227ENST00000485479 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
APTX-227ENST00000485479 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
APTX-227ENST00000485479 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
APTX-227ENST00000485479 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
APTX-227ENST00000485479 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
APTX-227ENST00000485479 PRM1P04553 51 aa2.25□□□□□ -2.05
APTX-227ENST00000485479 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
APTX-227ENST00000485479 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
APTX-227ENST00000485479 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
APTX-227ENST00000485479 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 226 ms