RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 KRTAP5-1Q6L8H4 278 aa4.83□□□□□ -1.64
UBA3-210ENST00000485424 KRTAP19-5Q3LI72 72 aa4.82□□□□□ -1.64
UBA3-210ENST00000485424 MT1GP13640 62 aa4.81□□□□□ -1.64
UBA3-210ENST00000485424 KRTAP12-1P59990 96 aa4.81□□□□□ -1.64
UBA3-210ENST00000485424 COX7CP15954 63 aa4.8□□□□□ -1.64
UBA3-210ENST00000485424 SMIM26A0A096LP01 95 aa4.79□□□□□ -1.64
UBA3-210ENST00000485424 A0A1B0GU69 56 aa4.79□□□□□ -1.64
UBA3-210ENST00000485424 MT4P47944 62 aa4.77□□□□□ -1.65
UBA3-210ENST00000485424 AHNAK2Q8IVF2 5795 aa4.75□□□□□ -1.65
UBA3-210ENST00000485424 H7BZZ5 65 aa4.74□□□□□ -1.65
UBA3-210ENST00000485424 KRTAP5-4Q6L8H1 288 aa4.71□□□□□ -1.66
UBA3-210ENST00000485424 MT1MQ8N339 61 aa4.71□□□□□ -1.66
UBA3-210ENST00000485424 TNP1P09430 55 aa4.7□□□□□ -1.66
UBA3-210ENST00000485424 A8MU10 97 aa4.69□□□□□ -1.66
UBA3-210ENST00000485424 MT1LQ93083 61 aa4.68□□□□□ -1.66
UBA3-210ENST00000485424 KRTAP5-10Q6L8G5 202 aa4.67□□□□□ -1.66
UBA3-210ENST00000485424 KRTAP4-4Q9BYR3 166 aa4.66□□□□□ -1.66
UBA3-210ENST00000485424 C10orf95Q9H7T3 257 aa4.66□□□□□ -1.66
UBA3-210ENST00000485424 LCE3AQ5TA76 89 aa4.65□□□□□ -1.67
UBA3-210ENST00000485424 PRR15LQ9BU68 103 aa4.63□□□□□ -1.67
UBA3-210ENST00000485424 KRTAP4-3Q9BYR4 195 aa4.61□□□□□ -1.67
UBA3-210ENST00000485424 ANAPC13Q9BS18 74 aa4.59□□□□□ -1.67
UBA3-210ENST00000485424 ATP5EP56381 51 aaPredicted RBP4.51□□□□□ -1.69
UBA3-210ENST00000485424 KRTAP5-7Q6L8G8 165 aa4.51□□□□□ -1.69
UBA3-210ENST00000485424 KRTAP12-3P60328 96 aa4.49□□□□□ -1.69
UBA3-210ENST00000485424 LINC01558Q9Y6Z2 57 aa4.46□□□□□ -1.7
UBA3-210ENST00000485424 CCDC179H3BU77 68 aa4.44□□□□□ -1.7
UBA3-210ENST00000485424 UQCR11O14957 56 aa4.44□□□□□ -1.7
UBA3-210ENST00000485424 KRTAP20-2Q3LI61 65 aa4.41□□□□□ -1.7
UBA3-210ENST00000485424 MT3P25713 68 aa4.35□□□□□ -1.71
UBA3-210ENST00000485424 KRTAP25-1Q3LHN0 102 aa4.35□□□□□ -1.71
UBA3-210ENST00000485424 KRTAP5-5Q701N2 237 aaPredicted RBP4.35□□□□□ -1.71
UBA3-210ENST00000485424 SPRR5A0A1B0GTR4 108 aa4.34□□□□□ -1.71
UBA3-210ENST00000485424 K7ERS5 55 aa4.34□□□□□ -1.71
UBA3-210ENST00000485424 KRTAP12-4P60329 112 aa4.31□□□□□ -1.72
UBA3-210ENST00000485424 TMEM258P61165 79 aa4.31□□□□□ -1.72
UBA3-210ENST00000485424 MIR22HGQ0VDD5 57 aa4.31□□□□□ -1.72
UBA3-210ENST00000485424 KRTAP9-6A8MVA2 160 aa4.3□□□□□ -1.72
UBA3-210ENST00000485424 OBSCNQ5VST9 7968 aa4.25□□□□□ -1.73
UBA3-210ENST00000485424 SYNE1Q8NF91 8797 aaKnown RBP4.21□□□□□ -1.73
UBA3-210ENST00000485424 V9GYY9 64 aa4.16□□□□□ -1.74
UBA3-210ENST00000485424 PSPHP1O15172 72 aa4.14□□□□□ -1.75
UBA3-210ENST00000485424 LCE3CQ5T5A8 94 aa4.11□□□□□ -1.75
UBA3-210ENST00000485424 Q1T7F1 81 aa4.05□□□□□ -1.76
UBA3-210ENST00000485424 KRTAP5-2Q701N4 177 aa4.04□□□□□ -1.76
UBA3-210ENST00000485424 CDC42SE1Q9NRR8 79 aa4.04□□□□□ -1.76
UBA3-210ENST00000485424 A6NED7 52 aa4.03□□□□□ -1.76
UBA3-210ENST00000485424 MT1AP04731 61 aa4□□□□□ -1.77
UBA3-210ENST00000485424 RPS28P62857 69 aaKnown RBP4□□□□□ -1.77
UBA3-210ENST00000485424 KRTAP6-1Q3LI64 71 aa3.97□□□□□ -1.77
UBA3-210ENST00000485424 KRTAP5-8O75690 187 aa3.96□□□□□ -1.78
UBA3-210ENST00000485424 MUC5ACP98088 5654 aa3.94□□□□□ -1.78
UBA3-210ENST00000485424 AHNAKQ09666 5890 aaKnown RBP3.94□□□□□ -1.78
UBA3-210ENST00000485424 MUC5BQ9HC84 5762 aaPredicted RBP3.93□□□□□ -1.78
UBA3-210ENST00000485424 ROMO1P60602 79 aa3.93□□□□□ -1.78
UBA3-210ENST00000485424 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
UBA3-210ENST00000485424 KRTAP6-2Q3LI66 62 aa3.83□□□□□ -1.8
UBA3-210ENST00000485424 PCP4P48539 62 aa3.47□□□□□ -1.85
UBA3-210ENST00000485424 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
UBA3-210ENST00000485424 BRK1Q8WUW1 75 aa3.27□□□□□ -1.89
UBA3-210ENST00000485424 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
UBA3-210ENST00000485424 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
UBA3-210ENST00000485424 PMAIP1Q13794 54 aa3.06□□□□□ -1.92
UBA3-210ENST00000485424 LCE3DQ9BYE3 92 aa2.96□□□□□ -1.94
UBA3-210ENST00000485424 PRAC1Q96KF2 57 aa2.95□□□□□ -1.94
UBA3-210ENST00000485424 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
UBA3-210ENST00000485424 A0A0A0MQY5 61 aa2.73□□□□□ -1.97
UBA3-210ENST00000485424 PHGR1C9JFL3 82 aa2.72□□□□□ -1.97
UBA3-210ENST00000485424 NDUFAF8A1L188 74 aa2.65□□□□□ -1.99
UBA3-210ENST00000485424 LUZP6Q538Z0 58 aa2.64□□□□□ -1.99
UBA3-210ENST00000485424 PRO0628Q9UI54 55 aa2.62□□□□□ -1.99
UBA3-210ENST00000485424 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
UBA3-210ENST00000485424 SVIPQ8NHG7 77 aa2.6□□□□□ -1.99
UBA3-210ENST00000485424 KTN1-AS1Q86SY8 53 aa2.58□□□□□ -2
UBA3-210ENST00000485424 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
UBA3-210ENST00000485424 PRM1P04553 51 aa2□□□□□ -2.09
UBA3-210ENST00000485424 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
UBA3-210ENST00000485424 INE1O15225 51 aa1.45□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 66.8 ms