RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 SPRR2EP22531 72 aa4.3□□□□□ -1.72
DDX56-212ENST00000485367 SPRR2BP35325 72 aa4.3□□□□□ -1.72
DDX56-212ENST00000485367 SPRR2AP35326 72 aa4.3□□□□□ -1.72
DDX56-212ENST00000485367 KRTAP4-8A0A0G2JLE6 195 aa4.26□□□□□ -1.73
DDX56-212ENST00000485367 KRTAP4-8Q9BYQ9 185 aa4.26□□□□□ -1.73
DDX56-212ENST00000485367 KRTAP2-3P0C7H8 128 aa4.25□□□□□ -1.73
DDX56-212ENST00000485367 KRTAP2-4Q9BYR9 128 aa4.25□□□□□ -1.73
DDX56-212ENST00000485367 KRTAP10-7P60409 375 aaPredicted RBP4.24□□□□□ -1.73
DDX56-212ENST00000485367 LCE1AQ5T7P2 110 aa4.22□□□□□ -1.73
DDX56-212ENST00000485367 KRTAP10-12P60413 245 aa4.2□□□□□ -1.74
DDX56-212ENST00000485367 LCE3AQ5TA76 89 aa4.17□□□□□ -1.74
DDX56-212ENST00000485367 SPRR2DP22532 72 aa4.15□□□□□ -1.74
DDX56-212ENST00000485367 KRTAP2-2Q9BYT5 123 aa4.11□□□□□ -1.75
DDX56-212ENST00000485367 KRTAP2-1Q9BYU5 128 aa4.11□□□□□ -1.75
DDX56-212ENST00000485367 LCE3BQ5TA77 95 aa4.04□□□□□ -1.76
DDX56-212ENST00000485367 KRTAP12-3P60328 96 aa4□□□□□ -1.77
DDX56-212ENST00000485367 KRTAP19-7Q3SYF9 63 aa3.96□□□□□ -1.78
DDX56-212ENST00000485367 MT1EP04732 61 aa3.94□□□□□ -1.78
DDX56-212ENST00000485367 LCE5AQ5TCM9 118 aa3.91□□□□□ -1.78
DDX56-212ENST00000485367 KRTAP19-3Q7Z4W3 81 aa3.9□□□□□ -1.79
DDX56-212ENST00000485367 DSTQ03001 7570 aaKnown RBP3.88□□□□□ -1.79
DDX56-212ENST00000485367 KRTAP19-5Q3LI72 72 aa3.87□□□□□ -1.79
DDX56-212ENST00000485367 MT1GP13640 62 aa3.81□□□□□ -1.8
DDX56-212ENST00000485367 GPR98Q8WXG9 6306 aa3.8□□□□□ -1.8
DDX56-212ENST00000485367 LCE3CQ5T5A8 94 aa3.79□□□□□ -1.8
DDX56-212ENST00000485367 KRTAP4-9Q9BYQ8 210 aa3.77□□□□□ -1.81
DDX56-212ENST00000485367 MT1LQ93083 61 aa3.76□□□□□ -1.81
DDX56-212ENST00000485367 MT1MQ8N339 61 aa3.75□□□□□ -1.81
DDX56-212ENST00000485367 KRTAP19-4Q3LI73 84 aa3.72□□□□□ -1.81
DDX56-212ENST00000485367 KRTAP4-3Q9BYR4 195 aa3.68□□□□□ -1.82
DDX56-212ENST00000485367 LCE1DQ5T752 114 aa3.66□□□□□ -1.82
DDX56-212ENST00000485367 LCE4AQ5TA78 99 aa3.65□□□□□ -1.83
DDX56-212ENST00000485367 MT4P47944 62 aa3.64□□□□□ -1.83
DDX56-212ENST00000485367 HMCN1Q96RW7 5635 aa3.61□□□□□ -1.83
DDX56-212ENST00000485367 KRTAP9-6A8MVA2 160 aa3.58□□□□□ -1.84
DDX56-212ENST00000485367 KRTAP4-7Q9BYR0 210 aa3.58□□□□□ -1.84
DDX56-212ENST00000485367 KRTAP5-4Q6L8H1 288 aa3.57□□□□□ -1.84
DDX56-212ENST00000485367 AHNAK2Q8IVF2 5795 aa3.54□□□□□ -1.84
DDX56-212ENST00000485367 KRTAP4-6Q9BYQ5 205 aa3.53□□□□□ -1.84
DDX56-212ENST00000485367 LOC100996750A0A140TA64 210 aa3.42□□□□□ -1.86
DDX56-212ENST00000485367 KRTAP5-5Q701N2 237 aaPredicted RBP3.42□□□□□ -1.86
DDX56-212ENST00000485367 KRTAP5-10Q6L8G5 202 aa3.4□□□□□ -1.87
DDX56-212ENST00000485367 KRTAP20-2Q3LI61 65 aa3.38□□□□□ -1.87
DDX56-212ENST00000485367 KRTAP12-4P60329 112 aa3.36□□□□□ -1.87
DDX56-212ENST00000485367 SYNE1Q8NF91 8797 aaKnown RBP3.33□□□□□ -1.88
DDX56-212ENST00000485367 KRTAP5-3Q6L8H2 238 aa3.33□□□□□ -1.88
DDX56-212ENST00000485367 KRTAP5-7Q6L8G8 165 aa3.28□□□□□ -1.89
DDX56-212ENST00000485367 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
DDX56-212ENST00000485367 MT1AP04731 61 aa3.2□□□□□ -1.9
DDX56-212ENST00000485367 KRTAP6-1Q3LI64 71 aa3.18□□□□□ -1.9
DDX56-212ENST00000485367 KRTAP5-2Q701N4 177 aa3.12□□□□□ -1.91
DDX56-212ENST00000485367 KRTAP9-4Q9BYQ2 154 aa3.1□□□□□ -1.91
DDX56-212ENST00000485367 KRTAP4-11Q9BYQ6 195 aa3.1□□□□□ -1.91
DDX56-212ENST00000485367 KRTAP6-2Q3LI66 62 aa3.05□□□□□ -1.92
DDX56-212ENST00000485367 KRTAP9-9Q9BYP9 154 aa3.04□□□□□ -1.92
DDX56-212ENST00000485367 KRTAP5-8O75690 187 aa2.98□□□□□ -1.93
DDX56-212ENST00000485367 LCE3DQ9BYE3 92 aa2.96□□□□□ -1.94
DDX56-212ENST00000485367 AHNAKQ09666 5890 aaKnown RBP2.96□□□□□ -1.94
DDX56-212ENST00000485367 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
DDX56-212ENST00000485367 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
DDX56-212ENST00000485367 MT3P25713 68 aa2.93□□□□□ -1.94
DDX56-212ENST00000485367 PRM1P04553 51 aa2.9□□□□□ -1.94
DDX56-212ENST00000485367 MUC5ACP98088 5654 aa2.9□□□□□ -1.95
DDX56-212ENST00000485367 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
DDX56-212ENST00000485367 KRTAP5-1Q6L8H4 278 aa2.8□□□□□ -1.96
DDX56-212ENST00000485367 LCE1EQ5T753 118 aa2.68□□□□□ -1.98
DDX56-212ENST00000485367 KRTAP4-2Q9BYR5 136 aa2.68□□□□□ -1.98
DDX56-212ENST00000485367 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
DDX56-212ENST00000485367 LCE1BQ5T7P3 118 aa2.56□□□□□ -2
DDX56-212ENST00000485367 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
DDX56-212ENST00000485367 KRTAP5-11Q6L8G4 156 aa2.25□□□□□ -2.05
DDX56-212ENST00000485367 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
DDX56-212ENST00000485367 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
DDX56-212ENST00000485367 PHGR1C9JFL3 82 aa2□□□□□ -2.09
DDX56-212ENST00000485367 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
DDX56-212ENST00000485367 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
DDX56-212ENST00000485367 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
DDX56-212ENST00000485367 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 149.5 ms