RNA–Protein interactions for RNA: ENST00000484476.5

LDLRAP1-205, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 1 (best)

Gene LDLRAP1, Length 657 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-205ENST00000484476 ROMO1P60602 79 aa5.3□□□□□ -1.56
LDLRAP1-205ENST00000484476 KRTAP12-1P59990 96 aa5.27□□□□□ -1.57
LDLRAP1-205ENST00000484476 KRTAP25-1Q3LHN0 102 aa5.26□□□□□ -1.57
LDLRAP1-205ENST00000484476 KRTAP19-7Q3SYF9 63 aa5.18□□□□□ -1.58
LDLRAP1-205ENST00000484476 MT1EP04732 61 aa5.17□□□□□ -1.58
LDLRAP1-205ENST00000484476 KRTAP19-3Q7Z4W3 81 aa5.16□□□□□ -1.58
LDLRAP1-205ENST00000484476 TNP1P09430 55 aa5.15□□□□□ -1.59
LDLRAP1-205ENST00000484476 LCE5AQ5TCM9 118 aa5.14□□□□□ -1.59
LDLRAP1-205ENST00000484476 PP632Q6XCG6 107 aa5.12□□□□□ -1.59
LDLRAP1-205ENST00000484476 KRTAP19-5Q3LI72 72 aa5.11□□□□□ -1.59
LDLRAP1-205ENST00000484476 GPR98Q8WXG9 6306 aa5.11□□□□□ -1.59
LDLRAP1-205ENST00000484476 MT1GP13640 62 aa5.08□□□□□ -1.6
LDLRAP1-205ENST00000484476 C10orf95Q9H7T3 257 aa5.02□□□□□ -1.61
LDLRAP1-205ENST00000484476 LCE3AQ5TA76 89 aa4.98□□□□□ -1.61
LDLRAP1-205ENST00000484476 DSTQ03001 7570 aaKnown RBP4.97□□□□□ -1.61
LDLRAP1-205ENST00000484476 MT1LQ93083 61 aa4.94□□□□□ -1.62
LDLRAP1-205ENST00000484476 MT1MQ8N339 61 aa4.93□□□□□ -1.62
LDLRAP1-205ENST00000484476 KRTAP4-9Q9BYQ8 210 aa4.92□□□□□ -1.62
LDLRAP1-205ENST00000484476 KRTAP12-3P60328 96 aa4.86□□□□□ -1.63
LDLRAP1-205ENST00000484476 KRTAP23-1A1A580 65 aa4.85□□□□□ -1.63
LDLRAP1-205ENST00000484476 LCE4AQ5TA78 99 aa4.85□□□□□ -1.63
LDLRAP1-205ENST00000484476 MT4P47944 62 aa4.79□□□□□ -1.64
LDLRAP1-205ENST00000484476 LCE1DQ5T752 114 aa4.79□□□□□ -1.64
LDLRAP1-205ENST00000484476 KRTAP4-3Q9BYR4 195 aa4.76□□□□□ -1.65
LDLRAP1-205ENST00000484476 KRTAP15-1Q3LI76 137 aa4.75□□□□□ -1.65
LDLRAP1-205ENST00000484476 KRTAP5-4Q6L8H1 288 aa4.67□□□□□ -1.66
LDLRAP1-205ENST00000484476 KRTAP19-4Q3LI73 84 aa4.66□□□□□ -1.66
LDLRAP1-205ENST00000484476 KRTAP4-7Q9BYR0 210 aa4.66□□□□□ -1.66
LDLRAP1-205ENST00000484476 HMCN1Q96RW7 5635 aa4.64□□□□□ -1.67
LDLRAP1-205ENST00000484476 KRTAP4-6Q9BYQ5 205 aa4.59□□□□□ -1.67
LDLRAP1-205ENST00000484476 KRTAP12-4P60329 112 aa4.53□□□□□ -1.68
LDLRAP1-205ENST00000484476 AHNAK2Q8IVF2 5795 aa4.47□□□□□ -1.69
LDLRAP1-205ENST00000484476 SPRR5A0A1B0GTR4 108 aa4.46□□□□□ -1.7
LDLRAP1-205ENST00000484476 LCE3CQ5T5A8 94 aa4.46□□□□□ -1.7
LDLRAP1-205ENST00000484476 KRTAP5-5Q701N2 237 aaPredicted RBP4.46□□□□□ -1.7
LDLRAP1-205ENST00000484476 NDUFAF8A1L188 74 aa4.43□□□□□ -1.7
LDLRAP1-205ENST00000484476 KRTAP20-2Q3LI61 65 aa4.43□□□□□ -1.7
LDLRAP1-205ENST00000484476 LOC100996750A0A140TA64 210 aa4.42□□□□□ -1.7
LDLRAP1-205ENST00000484476 KRTAP5-10Q6L8G5 202 aa4.42□□□□□ -1.7
LDLRAP1-205ENST00000484476 H3BS24 57 aa4.4□□□□□ -1.71
LDLRAP1-205ENST00000484476 LUZP6Q538Z0 58 aa4.37□□□□□ -1.71
LDLRAP1-205ENST00000484476 KRTAP5-3Q6L8H2 238 aa4.35□□□□□ -1.71
LDLRAP1-205ENST00000484476 KRTAP5-7Q6L8G8 165 aa4.28□□□□□ -1.72
LDLRAP1-205ENST00000484476 SYNE1Q8NF91 8797 aaKnown RBP4.24□□□□□ -1.73
LDLRAP1-205ENST00000484476 MT1AP04731 61 aa4.22□□□□□ -1.73
LDLRAP1-205ENST00000484476 KRTAP6-1Q3LI64 71 aa4.16□□□□□ -1.74
LDLRAP1-205ENST00000484476 KRTAP9-4Q9BYQ2 154 aa4.1□□□□□ -1.75
LDLRAP1-205ENST00000484476 KRTAP9-6A8MVA2 160 aa4.08□□□□□ -1.76
LDLRAP1-205ENST00000484476 KRTAP4-11Q9BYQ6 195 aa4.08□□□□□ -1.76
LDLRAP1-205ENST00000484476 KRTAP5-2Q701N4 177 aa4.07□□□□□ -1.76
LDLRAP1-205ENST00000484476 A0A0A0MQY5 61 aa4.03□□□□□ -1.76
LDLRAP1-205ENST00000484476 KRTAP6-2Q3LI66 62 aa4.02□□□□□ -1.77
LDLRAP1-205ENST00000484476 MT3P25713 68 aa3.92□□□□□ -1.78
LDLRAP1-205ENST00000484476 AHNAKQ09666 5890 aaKnown RBP3.9□□□□□ -1.78
LDLRAP1-205ENST00000484476 KRTAP5-8O75690 187 aa3.89□□□□□ -1.79
LDLRAP1-205ENST00000484476 KRTAP9-9Q9BYP9 154 aa3.81□□□□□ -1.8
LDLRAP1-205ENST00000484476 MUC5ACP98088 5654 aa3.8□□□□□ -1.8
LDLRAP1-205ENST00000484476 OBSCNQ5VST9 7968 aa3.79□□□□□ -1.8
LDLRAP1-205ENST00000484476 INE1O15225 51 aa3.78□□□□□ -1.8
LDLRAP1-205ENST00000484476 MUC5BQ9HC84 5762 aaPredicted RBP3.76□□□□□ -1.81
LDLRAP1-205ENST00000484476 KRTAP5-1Q6L8H4 278 aa3.65□□□□□ -1.83
LDLRAP1-205ENST00000484476 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
LDLRAP1-205ENST00000484476 LCE1BQ5T7P3 118 aa3.4□□□□□ -1.87
LDLRAP1-205ENST00000484476 LCE1CQ5T751 118 aa3.31□□□□□ -1.88
LDLRAP1-205ENST00000484476 KRTAP4-2Q9BYR5 136 aa3.29□□□□□ -1.88
LDLRAP1-205ENST00000484476 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
LDLRAP1-205ENST00000484476 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
LDLRAP1-205ENST00000484476 KRTAP4-12Q9BQ66 201 aa3.04□□□□□ -1.92
LDLRAP1-205ENST00000484476 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
LDLRAP1-205ENST00000484476 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
LDLRAP1-205ENST00000484476 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
LDLRAP1-205ENST00000484476 PRM1P04553 51 aa2.75□□□□□ -1.97
LDLRAP1-205ENST00000484476 KRTAP21-2Q3LI59 83 aa2.73□□□□□ -1.97
LDLRAP1-205ENST00000484476 PHGR1C9JFL3 82 aa2.64□□□□□ -1.99
LDLRAP1-205ENST00000484476 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
LDLRAP1-205ENST00000484476 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
LDLRAP1-205ENST00000484476 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
LDLRAP1-205ENST00000484476 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 67.4 ms