RNA–Protein interactions for RNA: ENST00000484412.1

HDLBP-240, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-240ENST00000484412 KRTAP2-3P0C7H8 128 aa5.27□□□□□ -1.57
HDLBP-240ENST00000484412 MIR22HGQ0VDD5 57 aa5.27□□□□□ -1.57
HDLBP-240ENST00000484412 KRTAP2-4Q9BYR9 128 aa5.27□□□□□ -1.57
HDLBP-240ENST00000484412 KRTAP19-7Q3SYF9 63 aa5.26□□□□□ -1.57
HDLBP-240ENST00000484412 KRTAP20-1Q3LI63 56 aa5.25□□□□□ -1.57
HDLBP-240ENST00000484412 TNP1P09430 55 aa5.24□□□□□ -1.57
HDLBP-240ENST00000484412 PSPHP1O15172 72 aa5.21□□□□□ -1.58
HDLBP-240ENST00000484412 MT1EP04732 61 aa5.17□□□□□ -1.58
HDLBP-240ENST00000484412 K7ERS5 55 aa5.14□□□□□ -1.59
HDLBP-240ENST00000484412 SPRR2DP22532 72 aa5.13□□□□□ -1.59
HDLBP-240ENST00000484412 KRTAP2-2Q9BYT5 123 aa5.12□□□□□ -1.59
HDLBP-240ENST00000484412 KRTAP2-1Q9BYU5 128 aa5.12□□□□□ -1.59
HDLBP-240ENST00000484412 KRTAP19-5Q3LI72 72 aa5.11□□□□□ -1.59
HDLBP-240ENST00000484412 KRTAP19-3Q7Z4W3 81 aa5.11□□□□□ -1.59
HDLBP-240ENST00000484412 KRTAP15-1Q3LI76 137 aa5.1□□□□□ -1.59
HDLBP-240ENST00000484412 MT1GP13640 62 aa5.08□□□□□ -1.6
HDLBP-240ENST00000484412 KRTAP25-1Q3LHN0 102 aa5.07□□□□□ -1.6
HDLBP-240ENST00000484412 LCE3AQ5TA76 89 aa5.07□□□□□ -1.6
HDLBP-240ENST00000484412 A6NED7 52 aa5.06□□□□□ -1.6
HDLBP-240ENST00000484412 PP632Q6XCG6 107 aa4.98□□□□□ -1.61
HDLBP-240ENST00000484412 MT1LQ93083 61 aa4.98□□□□□ -1.61
HDLBP-240ENST00000484412 CDC42SE1Q9NRR8 79 aa4.96□□□□□ -1.62
HDLBP-240ENST00000484412 KRTAP12-3P60328 96 aa4.93□□□□□ -1.62
HDLBP-240ENST00000484412 DSTQ03001 7570 aaKnown RBP4.91□□□□□ -1.62
HDLBP-240ENST00000484412 MT1MQ8N339 61 aa4.9□□□□□ -1.63
HDLBP-240ENST00000484412 ROMO1P60602 79 aa4.84□□□□□ -1.63
HDLBP-240ENST00000484412 KRTAP4-3Q9BYR4 195 aa4.7□□□□□ -1.66
HDLBP-240ENST00000484412 KRTAP5-4Q6L8H1 288 aa4.66□□□□□ -1.66
HDLBP-240ENST00000484412 KRTAP5-3Q6L8H2 238 aa4.65□□□□□ -1.67
HDLBP-240ENST00000484412 LCE3CQ5T5A8 94 aa4.59□□□□□ -1.67
HDLBP-240ENST00000484412 KRTAP5-5Q701N2 237 aaPredicted RBP4.54□□□□□ -1.68
HDLBP-240ENST00000484412 BRK1Q8WUW1 75 aa4.52□□□□□ -1.69
HDLBP-240ENST00000484412 SVIPQ8NHG7 77 aa4.51□□□□□ -1.69
HDLBP-240ENST00000484412 MT4P47944 62 aa4.44□□□□□ -1.7
HDLBP-240ENST00000484412 SPRR5A0A1B0GTR4 108 aa4.39□□□□□ -1.71
HDLBP-240ENST00000484412 SYNE1Q8NF91 8797 aaKnown RBP4.37□□□□□ -1.71
HDLBP-240ENST00000484412 KRTAP12-4P60329 112 aa4.34□□□□□ -1.71
HDLBP-240ENST00000484412 PMAIP1Q13794 54 aa4.33□□□□□ -1.72
HDLBP-240ENST00000484412 HMCN1Q96RW7 5635 aa4.33□□□□□ -1.72
HDLBP-240ENST00000484412 KRTAP20-2Q3LI61 65 aa4.3□□□□□ -1.72
HDLBP-240ENST00000484412 KRTAP9-6A8MVA2 160 aa4.29□□□□□ -1.72
HDLBP-240ENST00000484412 MT1AP04731 61 aa4.26□□□□□ -1.73
HDLBP-240ENST00000484412 A0A0A0MQY5 61 aa4.25□□□□□ -1.73
HDLBP-240ENST00000484412 PRO0628Q9UI54 55 aa4.19□□□□□ -1.74
HDLBP-240ENST00000484412 KRTAP6-1Q3LI64 71 aa4.17□□□□□ -1.74
HDLBP-240ENST00000484412 KRTAP5-10Q6L8G5 202 aa4.15□□□□□ -1.75
HDLBP-240ENST00000484412 GPR98Q8WXG9 6306 aa4.12□□□□□ -1.75
HDLBP-240ENST00000484412 KRTAP5-2Q701N4 177 aa4.11□□□□□ -1.75
HDLBP-240ENST00000484412 AHNAK2Q8IVF2 5795 aa4.04□□□□□ -1.76
HDLBP-240ENST00000484412 PRAC1Q96KF2 57 aa4.01□□□□□ -1.77
HDLBP-240ENST00000484412 KRTAP5-7Q6L8G8 165 aa3.99□□□□□ -1.77
HDLBP-240ENST00000484412 KRTAP6-2Q3LI66 62 aa3.94□□□□□ -1.78
HDLBP-240ENST00000484412 KTN1-AS1Q86SY8 53 aa3.94□□□□□ -1.78
HDLBP-240ENST00000484412 MT3P25713 68 aa3.91□□□□□ -1.78
HDLBP-240ENST00000484412 KRTAP5-8O75690 187 aa3.77□□□□□ -1.81
HDLBP-240ENST00000484412 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
HDLBP-240ENST00000484412 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
HDLBP-240ENST00000484412 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
HDLBP-240ENST00000484412 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
HDLBP-240ENST00000484412 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
HDLBP-240ENST00000484412 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
HDLBP-240ENST00000484412 LUZP6Q538Z0 58 aa3.45□□□□□ -1.86
HDLBP-240ENST00000484412 MUC5ACP98088 5654 aa3.42□□□□□ -1.86
HDLBP-240ENST00000484412 LCE3DQ9BYE3 92 aa3.35□□□□□ -1.87
HDLBP-240ENST00000484412 NDUFAF8A1L188 74 aa3.34□□□□□ -1.87
HDLBP-240ENST00000484412 LCE1CQ5T751 118 aa3.34□□□□□ -1.87
HDLBP-240ENST00000484412 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
HDLBP-240ENST00000484412 MUC5BQ9HC84 5762 aaPredicted RBP3.33□□□□□ -1.88
HDLBP-240ENST00000484412 AHNAKQ09666 5890 aaKnown RBP3.25□□□□□ -1.89
HDLBP-240ENST00000484412 LCE3EQ5T5B0 92 aa3.2□□□□□ -1.9
HDLBP-240ENST00000484412 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
HDLBP-240ENST00000484412 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
HDLBP-240ENST00000484412 PHGR1C9JFL3 82 aa2.56□□□□□ -2
HDLBP-240ENST00000484412 INE1O15225 51 aa2.47□□□□□ -2.01
HDLBP-240ENST00000484412 PRM1P04553 51 aa2.43□□□□□ -2.02
HDLBP-240ENST00000484412 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
HDLBP-240ENST00000484412 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
HDLBP-240ENST00000484412 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms