RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 KRTAP19-3Q7Z4W3 81 aa9.73□□□□□ -0.85
SMDT1-203ENST00000484235 GPR98Q8WXG9 6306 aa9.72□□□□□ -0.85
SMDT1-203ENST00000484235 A6NED7 52 aa9.72□□□□□ -0.85
SMDT1-203ENST00000484235 DSTQ03001 7570 aaKnown RBP9.59□□□□□ -0.87
SMDT1-203ENST00000484235 KRTAP25-1Q3LHN0 102 aa9.58□□□□□ -0.88
SMDT1-203ENST00000484235 MT1GP13640 62 aa9.57□□□□□ -0.88
SMDT1-203ENST00000484235 MT1LQ93083 61 aa9.5□□□□□ -0.89
SMDT1-203ENST00000484235 KRTAP4-9Q9BYQ8 210 aa9.5□□□□□ -0.89
SMDT1-203ENST00000484235 PP632Q6XCG6 107 aa9.49□□□□□ -0.89
SMDT1-203ENST00000484235 KRTAP12-3P60328 96 aa9.42□□□□□ -0.9
SMDT1-203ENST00000484235 MT1MQ8N339 61 aa9.38□□□□□ -0.91
SMDT1-203ENST00000484235 CDC42SE1Q9NRR8 79 aa9.33□□□□□ -0.92
SMDT1-203ENST00000484235 KRTAP23-1A1A580 65 aa9.27□□□□□ -0.93
SMDT1-203ENST00000484235 LCE1DQ5T752 114 aa9.23□□□□□ -0.93
SMDT1-203ENST00000484235 ROMO1P60602 79 aa9.2□□□□□ -0.94
SMDT1-203ENST00000484235 KRTAP4-3Q9BYR4 195 aa9.13□□□□□ -0.95
SMDT1-203ENST00000484235 HMCN1Q96RW7 5635 aa9.11□□□□□ -0.95
SMDT1-203ENST00000484235 LCE4AQ5TA78 99 aa9.05□□□□□ -0.96
SMDT1-203ENST00000484235 KRTAP4-7Q9BYR0 210 aa9.04□□□□□ -0.96
SMDT1-203ENST00000484235 MT4P47944 62 aa9.01□□□□□ -0.97
SMDT1-203ENST00000484235 KRTAP19-4Q3LI73 84 aa8.98□□□□□ -0.97
SMDT1-203ENST00000484235 AHNAK2Q8IVF2 5795 aa8.96□□□□□ -0.97
SMDT1-203ENST00000484235 KRTAP15-1Q3LI76 137 aa8.93□□□□□ -0.98
SMDT1-203ENST00000484235 KRTAP5-10Q6L8G5 202 aa8.87□□□□□ -0.99
SMDT1-203ENST00000484235 KRTAP5-4Q6L8H1 288 aa8.87□□□□□ -0.99
SMDT1-203ENST00000484235 KRTAP4-6Q9BYQ5 205 aa8.78□□□□□ -1
SMDT1-203ENST00000484235 LCE3CQ5T5A8 94 aa8.72□□□□□ -1.01
SMDT1-203ENST00000484235 BRK1Q8WUW1 75 aa8.69□□□□□ -1.02
SMDT1-203ENST00000484235 KRTAP5-7Q6L8G8 165 aa8.58□□□□□ -1.04
SMDT1-203ENST00000484235 KRTAP5-5Q701N2 237 aaPredicted RBP8.58□□□□□ -1.04
SMDT1-203ENST00000484235 LOC100996750A0A140TA64 210 aa8.55□□□□□ -1.04
SMDT1-203ENST00000484235 KRTAP5-3Q6L8H2 238 aa8.53□□□□□ -1.04
SMDT1-203ENST00000484235 KRTAP20-2Q3LI61 65 aa8.37□□□□□ -1.07
SMDT1-203ENST00000484235 KRTAP12-4P60329 112 aa8.3□□□□□ -1.08
SMDT1-203ENST00000484235 SPRR5A0A1B0GTR4 108 aa8.26□□□□□ -1.09
SMDT1-203ENST00000484235 PMAIP1Q13794 54 aa8.22□□□□□ -1.09
SMDT1-203ENST00000484235 KRTAP9-6A8MVA2 160 aa8.19□□□□□ -1.1
SMDT1-203ENST00000484235 SYNE1Q8NF91 8797 aaKnown RBP8.18□□□□□ -1.1
SMDT1-203ENST00000484235 MT1AP04731 61 aa8.09□□□□□ -1.11
SMDT1-203ENST00000484235 KRTAP6-1Q3LI64 71 aa8.01□□□□□ -1.13
SMDT1-203ENST00000484235 PRO0628Q9UI54 55 aa7.85□□□□□ -1.15
SMDT1-203ENST00000484235 KRTAP9-4Q9BYQ2 154 aa7.81□□□□□ -1.16
SMDT1-203ENST00000484235 PRAC1Q96KF2 57 aa7.79□□□□□ -1.16
SMDT1-203ENST00000484235 KRTAP4-11Q9BYQ6 195 aa7.77□□□□□ -1.17
SMDT1-203ENST00000484235 KRTAP5-2Q701N4 177 aa7.73□□□□□ -1.17
SMDT1-203ENST00000484235 KRTAP6-2Q3LI66 62 aa7.61□□□□□ -1.19
SMDT1-203ENST00000484235 KRTAP5-8O75690 187 aa7.55□□□□□ -1.2
SMDT1-203ENST00000484235 AHNAKQ09666 5890 aaKnown RBP7.49□□□□□ -1.21
SMDT1-203ENST00000484235 MUC5ACP98088 5654 aa7.46□□□□□ -1.22
SMDT1-203ENST00000484235 MUC5BQ9HC84 5762 aaPredicted RBP7.46□□□□□ -1.22
SMDT1-203ENST00000484235 KTN1-AS1Q86SY8 53 aa7.43□□□□□ -1.22
SMDT1-203ENST00000484235 MT3P25713 68 aa7.41□□□□□ -1.22
SMDT1-203ENST00000484235 OBSCNQ5VST9 7968 aa7.28□□□□□ -1.24
SMDT1-203ENST00000484235 KRTAP9-9Q9BYP9 154 aa7.17□□□□□ -1.26
SMDT1-203ENST00000484235 SVIPQ8NHG7 77 aa7.07□□□□□ -1.28
SMDT1-203ENST00000484235 KRTAP5-1Q6L8H4 278 aa6.99□□□□□ -1.29
SMDT1-203ENST00000484235 LCE1EQ5T753 118 aa6.74□□□□□ -1.33
SMDT1-203ENST00000484235 LUZP6Q538Z0 58 aa6.59□□□□□ -1.35
SMDT1-203ENST00000484235 LCE3DQ9BYE3 92 aa6.36□□□□□ -1.39
SMDT1-203ENST00000484235 KRTAP4-2Q9BYR5 136 aa6.29□□□□□ -1.4
SMDT1-203ENST00000484235 LCE1BQ5T7P3 118 aa6.28□□□□□ -1.4
SMDT1-203ENST00000484235 LCE1CQ5T751 118 aa6.25□□□□□ -1.41
SMDT1-203ENST00000484235 LCE3EQ5T5B0 92 aa6.04□□□□□ -1.44
SMDT1-203ENST00000484235 KRTAP4-12Q9BQ66 201 aa5.76□□□□□ -1.49
SMDT1-203ENST00000484235 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.72□□□□□ -1.49
SMDT1-203ENST00000484235 KRTAP5-11Q6L8G4 156 aa5.61□□□□□ -1.51
SMDT1-203ENST00000484235 NDUFAF8A1L188 74 aa5.53□□□□□ -1.52
SMDT1-203ENST00000484235 LCE1FQ5T754 118 aa5.45□□□□□ -1.54
SMDT1-203ENST00000484235 KRTAP21-2Q3LI59 83 aa5.29□□□□□ -1.56
SMDT1-203ENST00000484235 PHGR1C9JFL3 82 aa5.13□□□□□ -1.59
SMDT1-203ENST00000484235 KRTAP4-4Q9BYR3 166 aa4.77□□□□□ -1.65
SMDT1-203ENST00000484235 PRM1P04553 51 aa4.7□□□□□ -1.66
SMDT1-203ENST00000484235 MUC19Q7Z5P9 8384 aa4.55□□□□□ -1.68
SMDT1-203ENST00000484235 A0A0A0MQY5 61 aa4.53□□□□□ -1.68
SMDT1-203ENST00000484235 INE1O15225 51 aa4.52□□□□□ -1.69
SMDT1-203ENST00000484235 KRTAP21-1Q3LI58 79 aa3.9□□□□□ -1.79
SMDT1-203ENST00000484235 MUC16Q8WXI7 14507 aa3.23□□□□□ -1.89
SMDT1-203ENST00000484235 H3BS24 57 aa2.7□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 52 ms