RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 KTN1-AS1Q86SY8 53 aa3.91□□□□□ -1.78
CPSF4-213ENST00000484112 KRTAP4-9Q9BYQ8 210 aa3.88□□□□□ -1.79
CPSF4-213ENST00000484112 DSTQ03001 7570 aaKnown RBP3.86□□□□□ -1.79
CPSF4-213ENST00000484112 ROMO1P60602 79 aa3.8□□□□□ -1.8
CPSF4-213ENST00000484112 TNP1P09430 55 aa3.75□□□□□ -1.81
CPSF4-213ENST00000484112 LCE5AQ5TCM9 118 aa3.74□□□□□ -1.81
CPSF4-213ENST00000484112 C10orf95Q9H7T3 257 aa3.73□□□□□ -1.81
CPSF4-213ENST00000484112 KRTAP19-7Q3SYF9 63 aa3.72□□□□□ -1.81
CPSF4-213ENST00000484112 LCE1DQ5T752 114 aa3.72□□□□□ -1.81
CPSF4-213ENST00000484112 PRAC1Q96KF2 57 aa3.72□□□□□ -1.81
CPSF4-213ENST00000484112 KRTAP19-3Q7Z4W3 81 aa3.7□□□□□ -1.82
CPSF4-213ENST00000484112 MT1EP04732 61 aa3.69□□□□□ -1.82
CPSF4-213ENST00000484112 MT4P47944 62 aa3.68□□□□□ -1.82
CPSF4-213ENST00000484112 KRTAP25-1Q3LHN0 102 aa3.68□□□□□ -1.82
CPSF4-213ENST00000484112 KRTAP19-5Q3LI72 72 aa3.64□□□□□ -1.83
CPSF4-213ENST00000484112 LCE4AQ5TA78 99 aa3.63□□□□□ -1.83
CPSF4-213ENST00000484112 LCE3AQ5TA76 89 aa3.62□□□□□ -1.83
CPSF4-213ENST00000484112 HMCN1Q96RW7 5635 aa3.6□□□□□ -1.83
CPSF4-213ENST00000484112 MT1GP13640 62 aa3.6□□□□□ -1.83
CPSF4-213ENST00000484112 PP632Q6XCG6 107 aa3.59□□□□□ -1.83
CPSF4-213ENST00000484112 KRTAP5-10Q6L8G5 202 aa3.56□□□□□ -1.84
CPSF4-213ENST00000484112 AHNAK2Q8IVF2 5795 aa3.56□□□□□ -1.84
CPSF4-213ENST00000484112 KRTAP23-1A1A580 65 aa3.55□□□□□ -1.84
CPSF4-213ENST00000484112 MT1LQ93083 61 aa3.54□□□□□ -1.84
CPSF4-213ENST00000484112 KRTAP4-6Q9BYQ5 205 aa3.53□□□□□ -1.84
CPSF4-213ENST00000484112 KRTAP12-3P60328 96 aa3.52□□□□□ -1.85
CPSF4-213ENST00000484112 MT1MQ8N339 61 aa3.52□□□□□ -1.85
CPSF4-213ENST00000484112 KRTAP5-4Q6L8H1 288 aa3.49□□□□□ -1.85
CPSF4-213ENST00000484112 KRTAP4-3Q9BYR4 195 aa3.49□□□□□ -1.85
CPSF4-213ENST00000484112 KRTAP19-4Q3LI73 84 aa3.48□□□□□ -1.85
CPSF4-213ENST00000484112 KRTAP5-7Q6L8G8 165 aa3.46□□□□□ -1.86
CPSF4-213ENST00000484112 KRTAP5-3Q6L8H2 238 aa3.44□□□□□ -1.86
CPSF4-213ENST00000484112 SPRR5A0A1B0GTR4 108 aa3.4□□□□□ -1.87
CPSF4-213ENST00000484112 KRTAP15-1Q3LI76 137 aa3.34□□□□□ -1.87
CPSF4-213ENST00000484112 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
CPSF4-213ENST00000484112 KRTAP4-7Q9BYR0 210 aa3.33□□□□□ -1.88
CPSF4-213ENST00000484112 LCE3CQ5T5A8 94 aa3.26□□□□□ -1.89
CPSF4-213ENST00000484112 KRTAP12-4P60329 112 aa3.25□□□□□ -1.89
CPSF4-213ENST00000484112 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
CPSF4-213ENST00000484112 LOC100996750A0A140TA64 210 aa3.17□□□□□ -1.9
CPSF4-213ENST00000484112 SYNE1Q8NF91 8797 aaKnown RBP3.13□□□□□ -1.91
CPSF4-213ENST00000484112 KRTAP4-11Q9BYQ6 195 aa3.12□□□□□ -1.91
CPSF4-213ENST00000484112 LUZP6Q538Z0 58 aa3.05□□□□□ -1.92
CPSF4-213ENST00000484112 MT1AP04731 61 aa3.04□□□□□ -1.92
CPSF4-213ENST00000484112 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
CPSF4-213ENST00000484112 NDUFAF8A1L188 74 aa3.01□□□□□ -1.93
CPSF4-213ENST00000484112 KRTAP9-6A8MVA2 160 aa3.01□□□□□ -1.93
CPSF4-213ENST00000484112 KRTAP5-2Q701N4 177 aa3□□□□□ -1.93
CPSF4-213ENST00000484112 AHNAKQ09666 5890 aaKnown RBP2.99□□□□□ -1.93
CPSF4-213ENST00000484112 MUC5ACP98088 5654 aa2.97□□□□□ -1.93
CPSF4-213ENST00000484112 KRTAP6-1Q3LI64 71 aa2.97□□□□□ -1.93
CPSF4-213ENST00000484112 MUC5BQ9HC84 5762 aaPredicted RBP2.96□□□□□ -1.94
CPSF4-213ENST00000484112 KRTAP9-9Q9BYP9 154 aa2.93□□□□□ -1.94
CPSF4-213ENST00000484112 KRTAP9-4Q9BYQ2 154 aa2.92□□□□□ -1.94
CPSF4-213ENST00000484112 KRTAP6-2Q3LI66 62 aa2.89□□□□□ -1.95
CPSF4-213ENST00000484112 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
CPSF4-213ENST00000484112 MT3P25713 68 aa2.79□□□□□ -1.96
CPSF4-213ENST00000484112 H3BS24 57 aa2.75□□□□□ -1.97
CPSF4-213ENST00000484112 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
CPSF4-213ENST00000484112 A0A0A0MQY5 61 aa2.69□□□□□ -1.98
CPSF4-213ENST00000484112 LCE1EQ5T753 118 aa2.56□□□□□ -2
CPSF4-213ENST00000484112 INE1O15225 51 aa2.55□□□□□ -2
CPSF4-213ENST00000484112 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
CPSF4-213ENST00000484112 KRTAP4-2Q9BYR5 136 aa2.43□□□□□ -2.02
CPSF4-213ENST00000484112 LCE3DQ9BYE3 92 aa2.38□□□□□ -2.03
CPSF4-213ENST00000484112 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
CPSF4-213ENST00000484112 KRTAP4-12Q9BQ66 201 aa2.36□□□□□ -2.03
CPSF4-213ENST00000484112 LCE3EQ5T5B0 92 aa2.27□□□□□ -2.05
CPSF4-213ENST00000484112 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.18□□□□□ -2.06
CPSF4-213ENST00000484112 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
CPSF4-213ENST00000484112 LCE1FQ5T754 118 aa2.15□□□□□ -2.07
CPSF4-213ENST00000484112 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
CPSF4-213ENST00000484112 PRM1P04553 51 aa1.97□□□□□ -2.09
CPSF4-213ENST00000484112 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
CPSF4-213ENST00000484112 KRTAP4-4Q9BYR3 166 aa1.87□□□□□ -2.11
CPSF4-213ENST00000484112 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
CPSF4-213ENST00000484112 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
CPSF4-213ENST00000484112 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 1023.3 ms