RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 KTN1-AS1Q86SY8 53 aa3.91□□□□□ -1.78
CPSF4-213ENST00000484112 KRTAP4-9Q9BYQ8 210 aa3.88□□□□□ -1.79
CPSF4-213ENST00000484112 DSTQ03001 7570 aaKnown RBP3.86□□□□□ -1.79
CPSF4-213ENST00000484112 ROMO1P60602 79 aa3.8□□□□□ -1.8
CPSF4-213ENST00000484112 TNP1P09430 55 aa3.75□□□□□ -1.81
CPSF4-213ENST00000484112 LCE5AQ5TCM9 118 aa3.74□□□□□ -1.81
CPSF4-213ENST00000484112 C10orf95Q9H7T3 257 aa3.73□□□□□ -1.81
CPSF4-213ENST00000484112 KRTAP19-7Q3SYF9 63 aa3.72□□□□□ -1.81
CPSF4-213ENST00000484112 LCE1DQ5T752 114 aa3.72□□□□□ -1.81
CPSF4-213ENST00000484112 PRAC1Q96KF2 57 aa3.72□□□□□ -1.81
CPSF4-213ENST00000484112 KRTAP19-3Q7Z4W3 81 aa3.7□□□□□ -1.82
CPSF4-213ENST00000484112 MT1EP04732 61 aa3.69□□□□□ -1.82
CPSF4-213ENST00000484112 MT4P47944 62 aa3.68□□□□□ -1.82
CPSF4-213ENST00000484112 KRTAP25-1Q3LHN0 102 aa3.68□□□□□ -1.82
CPSF4-213ENST00000484112 KRTAP19-5Q3LI72 72 aa3.64□□□□□ -1.83
CPSF4-213ENST00000484112 LCE4AQ5TA78 99 aa3.63□□□□□ -1.83
CPSF4-213ENST00000484112 LCE3AQ5TA76 89 aa3.62□□□□□ -1.83
CPSF4-213ENST00000484112 HMCN1Q96RW7 5635 aa3.6□□□□□ -1.83
CPSF4-213ENST00000484112 MT1GP13640 62 aa3.6□□□□□ -1.83
CPSF4-213ENST00000484112 PP632Q6XCG6 107 aa3.59□□□□□ -1.83
CPSF4-213ENST00000484112 KRTAP5-10Q6L8G5 202 aa3.56□□□□□ -1.84
CPSF4-213ENST00000484112 AHNAK2Q8IVF2 5795 aa3.56□□□□□ -1.84
CPSF4-213ENST00000484112 KRTAP23-1A1A580 65 aa3.55□□□□□ -1.84
CPSF4-213ENST00000484112 MT1LQ93083 61 aa3.54□□□□□ -1.84
CPSF4-213ENST00000484112 KRTAP4-6Q9BYQ5 205 aa3.53□□□□□ -1.84
CPSF4-213ENST00000484112 KRTAP12-3P60328 96 aa3.52□□□□□ -1.85
CPSF4-213ENST00000484112 MT1MQ8N339 61 aa3.52□□□□□ -1.85
CPSF4-213ENST00000484112 KRTAP5-4Q6L8H1 288 aa3.49□□□□□ -1.85
CPSF4-213ENST00000484112 KRTAP4-3Q9BYR4 195 aa3.49□□□□□ -1.85
CPSF4-213ENST00000484112 KRTAP19-4Q3LI73 84 aa3.48□□□□□ -1.85
CPSF4-213ENST00000484112 KRTAP5-7Q6L8G8 165 aa3.46□□□□□ -1.86
CPSF4-213ENST00000484112 KRTAP5-3Q6L8H2 238 aa3.44□□□□□ -1.86
CPSF4-213ENST00000484112 SPRR5A0A1B0GTR4 108 aa3.4□□□□□ -1.87
CPSF4-213ENST00000484112 KRTAP15-1Q3LI76 137 aa3.34□□□□□ -1.87
CPSF4-213ENST00000484112 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
CPSF4-213ENST00000484112 KRTAP4-7Q9BYR0 210 aa3.33□□□□□ -1.88
CPSF4-213ENST00000484112 LCE3CQ5T5A8 94 aa3.26□□□□□ -1.89
CPSF4-213ENST00000484112 KRTAP12-4P60329 112 aa3.25□□□□□ -1.89
CPSF4-213ENST00000484112 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
CPSF4-213ENST00000484112 LOC100996750A0A140TA64 210 aa3.17□□□□□ -1.9
CPSF4-213ENST00000484112 SYNE1Q8NF91 8797 aaKnown RBP3.13□□□□□ -1.91
CPSF4-213ENST00000484112 KRTAP4-11Q9BYQ6 195 aa3.12□□□□□ -1.91
CPSF4-213ENST00000484112 LUZP6Q538Z0 58 aa3.05□□□□□ -1.92
CPSF4-213ENST00000484112 MT1AP04731 61 aa3.04□□□□□ -1.92
CPSF4-213ENST00000484112 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
CPSF4-213ENST00000484112 NDUFAF8A1L188 74 aa3.01□□□□□ -1.93
CPSF4-213ENST00000484112 KRTAP9-6A8MVA2 160 aa3.01□□□□□ -1.93
CPSF4-213ENST00000484112 KRTAP5-2Q701N4 177 aa3□□□□□ -1.93
CPSF4-213ENST00000484112 AHNAKQ09666 5890 aaKnown RBP2.99□□□□□ -1.93
CPSF4-213ENST00000484112 MUC5ACP98088 5654 aa2.97□□□□□ -1.93
CPSF4-213ENST00000484112 KRTAP6-1Q3LI64 71 aa2.97□□□□□ -1.93
CPSF4-213ENST00000484112 MUC5BQ9HC84 5762 aaPredicted RBP2.96□□□□□ -1.94
CPSF4-213ENST00000484112 KRTAP9-9Q9BYP9 154 aa2.93□□□□□ -1.94
CPSF4-213ENST00000484112 KRTAP9-4Q9BYQ2 154 aa2.92□□□□□ -1.94
CPSF4-213ENST00000484112 KRTAP6-2Q3LI66 62 aa2.89□□□□□ -1.95
CPSF4-213ENST00000484112 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
CPSF4-213ENST00000484112 MT3P25713 68 aa2.79□□□□□ -1.96
CPSF4-213ENST00000484112 H3BS24 57 aa2.75□□□□□ -1.97
CPSF4-213ENST00000484112 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
CPSF4-213ENST00000484112 A0A0A0MQY5 61 aa2.69□□□□□ -1.98
CPSF4-213ENST00000484112 LCE1EQ5T753 118 aa2.56□□□□□ -2
CPSF4-213ENST00000484112 INE1O15225 51 aa2.55□□□□□ -2
CPSF4-213ENST00000484112 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
CPSF4-213ENST00000484112 KRTAP4-2Q9BYR5 136 aa2.43□□□□□ -2.02
CPSF4-213ENST00000484112 LCE3DQ9BYE3 92 aa2.38□□□□□ -2.03
CPSF4-213ENST00000484112 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
CPSF4-213ENST00000484112 KRTAP4-12Q9BQ66 201 aa2.36□□□□□ -2.03
CPSF4-213ENST00000484112 LCE3EQ5T5B0 92 aa2.27□□□□□ -2.05
CPSF4-213ENST00000484112 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.18□□□□□ -2.06
CPSF4-213ENST00000484112 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
CPSF4-213ENST00000484112 LCE1FQ5T754 118 aa2.15□□□□□ -2.07
CPSF4-213ENST00000484112 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
CPSF4-213ENST00000484112 PRM1P04553 51 aa1.97□□□□□ -2.09
CPSF4-213ENST00000484112 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
CPSF4-213ENST00000484112 KRTAP4-4Q9BYR3 166 aa1.87□□□□□ -2.11
CPSF4-213ENST00000484112 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
CPSF4-213ENST00000484112 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
CPSF4-213ENST00000484112 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 89.8 ms