RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 LCE4AQ5TA78 99 aa4.98□□□□□ -1.61
VARS-226ENST00000483275 KRTAP4-3Q9BYR4 195 aa4.97□□□□□ -1.61
VARS-226ENST00000483275 V9GYY9 64 aa4.96□□□□□ -1.62
VARS-226ENST00000483275 PP632Q6XCG6 107 aa4.95□□□□□ -1.62
VARS-226ENST00000483275 MT1LQ93083 61 aa4.94□□□□□ -1.62
VARS-226ENST00000483275 KRTAP5-10Q6L8G5 202 aa4.91□□□□□ -1.62
VARS-226ENST00000483275 KRTAP4-6Q9BYQ5 205 aa4.9□□□□□ -1.63
VARS-226ENST00000483275 MIR22HGQ0VDD5 57 aa4.89□□□□□ -1.63
VARS-226ENST00000483275 TNP1P09430 55 aa4.88□□□□□ -1.63
VARS-226ENST00000483275 PSPHP1O15172 72 aa4.87□□□□□ -1.63
VARS-226ENST00000483275 Q1T7F1 81 aa4.87□□□□□ -1.63
VARS-226ENST00000483275 KRTAP5-4Q6L8H1 288 aa4.87□□□□□ -1.63
VARS-226ENST00000483275 K7ERS5 55 aa4.85□□□□□ -1.63
VARS-226ENST00000483275 C10orf95Q9H7T3 257 aa4.85□□□□□ -1.63
VARS-226ENST00000483275 PCP4P48539 62 aa4.82□□□□□ -1.64
VARS-226ENST00000483275 LCE3AQ5TA76 89 aa4.81□□□□□ -1.64
VARS-226ENST00000483275 KRTAP4-7Q9BYR0 210 aa4.76□□□□□ -1.65
VARS-226ENST00000483275 A6NED7 52 aa4.75□□□□□ -1.65
VARS-226ENST00000483275 RPS28P62857 69 aaKnown RBP4.74□□□□□ -1.65
VARS-226ENST00000483275 KRTAP5-7Q6L8G8 165 aa4.73□□□□□ -1.65
VARS-226ENST00000483275 KRTAP5-3Q6L8H2 238 aa4.73□□□□□ -1.65
VARS-226ENST00000483275 KRTAP25-1Q3LHN0 102 aa4.66□□□□□ -1.66
VARS-226ENST00000483275 KRTAP20-2Q3LI61 65 aa4.65□□□□□ -1.67
VARS-226ENST00000483275 SPRR5A0A1B0GTR4 108 aa4.59□□□□□ -1.67
VARS-226ENST00000483275 KRTAP12-3P60328 96 aa4.58□□□□□ -1.68
VARS-226ENST00000483275 KRTAP5-5Q701N2 237 aaPredicted RBP4.58□□□□□ -1.68
VARS-226ENST00000483275 CDC42SE1Q9NRR8 79 aa4.57□□□□□ -1.68
VARS-226ENST00000483275 LOC100996750A0A140TA64 210 aa4.52□□□□□ -1.69
VARS-226ENST00000483275 SYNE1Q8NF91 8797 aaKnown RBP4.52□□□□□ -1.69
VARS-226ENST00000483275 KRTAP12-4P60329 112 aa4.48□□□□□ -1.69
VARS-226ENST00000483275 KRTAP23-1A1A580 65 aa4.47□□□□□ -1.69
VARS-226ENST00000483275 ROMO1P60602 79 aa4.47□□□□□ -1.69
VARS-226ENST00000483275 KRTAP19-4Q3LI73 84 aa4.35□□□□□ -1.71
VARS-226ENST00000483275 KRTAP15-1Q3LI76 137 aa4.33□□□□□ -1.72
VARS-226ENST00000483275 AHNAKQ09666 5890 aaKnown RBP4.31□□□□□ -1.72
VARS-226ENST00000483275 KRTAP4-11Q9BYQ6 195 aa4.3□□□□□ -1.72
VARS-226ENST00000483275 MUC5ACP98088 5654 aa4.24□□□□□ -1.73
VARS-226ENST00000483275 BRK1Q8WUW1 75 aa4.24□□□□□ -1.73
VARS-226ENST00000483275 LCE3CQ5T5A8 94 aa4.22□□□□□ -1.73
VARS-226ENST00000483275 KRTAP5-2Q701N4 177 aa4.22□□□□□ -1.73
VARS-226ENST00000483275 KRTAP6-1Q3LI64 71 aa4.21□□□□□ -1.74
VARS-226ENST00000483275 MUC5BQ9HC84 5762 aaPredicted RBP4.19□□□□□ -1.74
VARS-226ENST00000483275 KRTAP5-8O75690 187 aa4.17□□□□□ -1.74
VARS-226ENST00000483275 MT1AP04731 61 aa4.17□□□□□ -1.74
VARS-226ENST00000483275 OBSCNQ5VST9 7968 aa4.14□□□□□ -1.75
VARS-226ENST00000483275 KRTAP6-2Q3LI66 62 aa4.08□□□□□ -1.76
VARS-226ENST00000483275 KRTAP9-4Q9BYQ2 154 aa4.04□□□□□ -1.76
VARS-226ENST00000483275 KRTAP9-6A8MVA2 160 aa4.03□□□□□ -1.76
VARS-226ENST00000483275 PMAIP1Q13794 54 aa3.98□□□□□ -1.77
VARS-226ENST00000483275 KRTAP9-9Q9BYP9 154 aa3.98□□□□□ -1.77
VARS-226ENST00000483275 KRTAP5-1Q6L8H4 278 aa3.86□□□□□ -1.79
VARS-226ENST00000483275 MT3P25713 68 aa3.79□□□□□ -1.8
VARS-226ENST00000483275 PRO0628Q9UI54 55 aa3.78□□□□□ -1.8
VARS-226ENST00000483275 PRAC1Q96KF2 57 aa3.77□□□□□ -1.81
VARS-226ENST00000483275 KTN1-AS1Q86SY8 53 aa3.6□□□□□ -1.83
VARS-226ENST00000483275 LCE1EQ5T753 118 aa3.51□□□□□ -1.85
VARS-226ENST00000483275 SVIPQ8NHG7 77 aa3.5□□□□□ -1.85
VARS-226ENST00000483275 LCE1BQ5T7P3 118 aa3.46□□□□□ -1.86
VARS-226ENST00000483275 KRTAP4-2Q9BYR5 136 aa3.44□□□□□ -1.86
VARS-226ENST00000483275 LCE1CQ5T751 118 aa3.28□□□□□ -1.88
VARS-226ENST00000483275 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
VARS-226ENST00000483275 LUZP6Q538Z0 58 aa3.26□□□□□ -1.89
VARS-226ENST00000483275 LCE3DQ9BYE3 92 aa3.09□□□□□ -1.91
VARS-226ENST00000483275 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
VARS-226ENST00000483275 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
VARS-226ENST00000483275 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
VARS-226ENST00000483275 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
VARS-226ENST00000483275 PHGR1C9JFL3 82 aa2.89□□□□□ -1.95
VARS-226ENST00000483275 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
VARS-226ENST00000483275 NDUFAF8A1L188 74 aa2.68□□□□□ -1.98
VARS-226ENST00000483275 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
VARS-226ENST00000483275 MUC19Q7Z5P9 8384 aa2.59□□□□□ -1.99
VARS-226ENST00000483275 PRM1P04553 51 aa2.28□□□□□ -2.04
VARS-226ENST00000483275 A0A0A0MQY5 61 aa2.25□□□□□ -2.05
VARS-226ENST00000483275 INE1O15225 51 aa2.21□□□□□ -2.06
VARS-226ENST00000483275 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
VARS-226ENST00000483275 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
VARS-226ENST00000483275 H3BS24 57 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 118 ms