RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 KRTAP12-1P59990 96 aa4.51□□□□□ -1.69
HDLBP-239ENST00000483086 LCE5AQ5TCM9 118 aa4.5□□□□□ -1.69
HDLBP-239ENST00000483086 A0A1B0GU33 70 aa4.48□□□□□ -1.69
HDLBP-239ENST00000483086 KRTAP19-4Q3LI73 84 aa4.48□□□□□ -1.69
HDLBP-239ENST00000483086 UQCR11O14957 56 aa4.47□□□□□ -1.69
HDLBP-239ENST00000483086 SPINT4Q6UDR6 99 aa4.47□□□□□ -1.69
HDLBP-239ENST00000483086 A0A1B0GU69 56 aa4.46□□□□□ -1.7
HDLBP-239ENST00000483086 KRTAP19-3Q7Z4W3 81 aa4.46□□□□□ -1.7
HDLBP-239ENST00000483086 MIR22HGQ0VDD5 57 aa4.45□□□□□ -1.7
HDLBP-239ENST00000483086 KRTAP4-12Q9BQ66 201 aa4.45□□□□□ -1.7
HDLBP-239ENST00000483086 KRTAP19-5Q3LI72 72 aa4.43□□□□□ -1.7
HDLBP-239ENST00000483086 ROMO1P60602 79 aa4.38□□□□□ -1.71
HDLBP-239ENST00000483086 KRTAP25-1Q3LHN0 102 aa4.35□□□□□ -1.71
HDLBP-239ENST00000483086 KRTAP4-9Q9BYQ8 210 aa4.34□□□□□ -1.71
HDLBP-239ENST00000483086 C10orf95Q9H7T3 257 aa4.34□□□□□ -1.71
HDLBP-239ENST00000483086 GPR98Q8WXG9 6306 aa4.31□□□□□ -1.72
HDLBP-239ENST00000483086 MT1GP13640 62 aa4.31□□□□□ -1.72
HDLBP-239ENST00000483086 LCE3AQ5TA76 89 aa4.31□□□□□ -1.72
HDLBP-239ENST00000483086 MT1LQ93083 61 aa4.31□□□□□ -1.72
HDLBP-239ENST00000483086 MT1MQ8N339 61 aa4.3□□□□□ -1.72
HDLBP-239ENST00000483086 KRTAP4-3Q9BYR4 195 aa4.28□□□□□ -1.72
HDLBP-239ENST00000483086 HMCN1Q96RW7 5635 aa4.27□□□□□ -1.73
HDLBP-239ENST00000483086 LCE4AQ5TA78 99 aa4.26□□□□□ -1.73
HDLBP-239ENST00000483086 KRTAP23-1A1A580 65 aa4.25□□□□□ -1.73
HDLBP-239ENST00000483086 K7ERS5 55 aa4.25□□□□□ -1.73
HDLBP-239ENST00000483086 A0A0A0MQY5 61 aa4.23□□□□□ -1.73
HDLBP-239ENST00000483086 LCE1DQ5T752 114 aa4.22□□□□□ -1.73
HDLBP-239ENST00000483086 KRTAP9-9Q9BYP9 154 aa4.21□□□□□ -1.74
HDLBP-239ENST00000483086 KRTAP9-4Q9BYQ2 154 aa4.21□□□□□ -1.74
HDLBP-239ENST00000483086 TNP1P09430 55 aa4.2□□□□□ -1.74
HDLBP-239ENST00000483086 PP632Q6XCG6 107 aa4.2□□□□□ -1.74
HDLBP-239ENST00000483086 KRTAP4-7Q9BYR0 210 aa4.18□□□□□ -1.74
HDLBP-239ENST00000483086 MT4P47944 62 aa4.15□□□□□ -1.75
HDLBP-239ENST00000483086 AHNAK2Q8IVF2 5795 aa4.14□□□□□ -1.75
HDLBP-239ENST00000483086 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
HDLBP-239ENST00000483086 KRTAP12-3P60328 96 aa4.09□□□□□ -1.75
HDLBP-239ENST00000483086 NDUFAF8A1L188 74 aa4.03□□□□□ -1.76
HDLBP-239ENST00000483086 KRTAP15-1Q3LI76 137 aa4.03□□□□□ -1.76
HDLBP-239ENST00000483086 LUZP6Q538Z0 58 aa3.99□□□□□ -1.77
HDLBP-239ENST00000483086 KRTAP5-5Q701N2 237 aaPredicted RBP3.99□□□□□ -1.77
HDLBP-239ENST00000483086 SYNE1Q8NF91 8797 aaKnown RBP3.97□□□□□ -1.77
HDLBP-239ENST00000483086 KRTAP5-10Q6L8G5 202 aa3.94□□□□□ -1.78
HDLBP-239ENST00000483086 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
HDLBP-239ENST00000483086 KRTAP5-3Q6L8H2 238 aa3.84□□□□□ -1.79
HDLBP-239ENST00000483086 SPRR5A0A1B0GTR4 108 aa3.81□□□□□ -1.8
HDLBP-239ENST00000483086 KRTAP4-11Q9BYQ6 195 aa3.81□□□□□ -1.8
HDLBP-239ENST00000483086 LCE3CQ5T5A8 94 aa3.78□□□□□ -1.8
HDLBP-239ENST00000483086 KRTAP5-7Q6L8G8 165 aa3.76□□□□□ -1.81
HDLBP-239ENST00000483086 KRTAP12-4P60329 112 aa3.75□□□□□ -1.81
HDLBP-239ENST00000483086 KRTAP4-2Q9BYR5 136 aa3.74□□□□□ -1.81
HDLBP-239ENST00000483086 KRTAP9-6A8MVA2 160 aa3.69□□□□□ -1.82
HDLBP-239ENST00000483086 KRTAP6-1Q3LI64 71 aa3.68□□□□□ -1.82
HDLBP-239ENST00000483086 MT1AP04731 61 aa3.64□□□□□ -1.83
HDLBP-239ENST00000483086 KRTAP5-2Q701N4 177 aa3.62□□□□□ -1.83
HDLBP-239ENST00000483086 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
HDLBP-239ENST00000483086 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
HDLBP-239ENST00000483086 INE1O15225 51 aa3.48□□□□□ -1.85
HDLBP-239ENST00000483086 KRTAP5-8O75690 187 aa3.46□□□□□ -1.86
HDLBP-239ENST00000483086 MUC5BQ9HC84 5762 aaPredicted RBP3.42□□□□□ -1.86
HDLBP-239ENST00000483086 AHNAKQ09666 5890 aaKnown RBP3.4□□□□□ -1.87
HDLBP-239ENST00000483086 MUC5ACP98088 5654 aa3.36□□□□□ -1.87
HDLBP-239ENST00000483086 MT3P25713 68 aa3.29□□□□□ -1.88
HDLBP-239ENST00000483086 KRTAP5-1Q6L8H4 278 aa3.27□□□□□ -1.89
HDLBP-239ENST00000483086 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
HDLBP-239ENST00000483086 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
HDLBP-239ENST00000483086 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
HDLBP-239ENST00000483086 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
HDLBP-239ENST00000483086 LCE3DQ9BYE3 92 aa2.68□□□□□ -1.98
HDLBP-239ENST00000483086 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.59□□□□□ -1.99
HDLBP-239ENST00000483086 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
HDLBP-239ENST00000483086 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
HDLBP-239ENST00000483086 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
HDLBP-239ENST00000483086 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
HDLBP-239ENST00000483086 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
HDLBP-239ENST00000483086 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
HDLBP-239ENST00000483086 PRM1P04553 51 aa2.14□□□□□ -2.07
HDLBP-239ENST00000483086 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
HDLBP-239ENST00000483086 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 64.6 ms