RNA–Protein interactions for RNA: ENST00000483062.5

SYN3-212, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-212ENST00000483062 PMAIP1Q13794 54 aa3.33□□□□□ -1.88
SYN3-212ENST00000483062 KRTAP8-1Q8IUC2 63 aa3.33□□□□□ -1.88
SYN3-212ENST00000483062 LINC01554Q52M75 96 aa3.32□□□□□ -1.88
SYN3-212ENST00000483062 UQCR11O14957 56 aa3.3□□□□□ -1.88
SYN3-212ENST00000483062 MT1XP80297 61 aa3.28□□□□□ -1.88
SYN3-212ENST00000483062 KRTAP12-2P59991 146 aa3.27□□□□□ -1.89
SYN3-212ENST00000483062 PRO2289Q9P1D8 64 aa3.27□□□□□ -1.89
SYN3-212ENST00000483062 SPATA8Q6RVD6 105 aa3.25□□□□□ -1.89
SYN3-212ENST00000483062 PSPHP1O15172 72 aa3.24□□□□□ -1.89
SYN3-212ENST00000483062 KRTAP13-4Q3LI77 160 aa3.24□□□□□ -1.89
SYN3-212ENST00000483062 KTN1-AS1Q86SY8 53 aa3.24□□□□□ -1.89
SYN3-212ENST00000483062 A0A0D9SG42 100 aa3.23□□□□□ -1.89
SYN3-212ENST00000483062 AHNAK2Q8IVF2 5795 aa3.22□□□□□ -1.89
SYN3-212ENST00000483062 MIR22HGQ0VDD5 57 aa3.22□□□□□ -1.89
SYN3-212ENST00000483062 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
SYN3-212ENST00000483062 HMCN1Q96RW7 5635 aa3.22□□□□□ -1.89
SYN3-212ENST00000483062 MT3P25713 68 aa3.21□□□□□ -1.9
SYN3-212ENST00000483062 SPINT4Q6UDR6 99 aa3.21□□□□□ -1.9
SYN3-212ENST00000483062 CAMK2N1Q7Z7J9 78 aa3.21□□□□□ -1.9
SYN3-212ENST00000483062 K7ERS5 55 aa3.2□□□□□ -1.9
SYN3-212ENST00000483062 A6NED7 52 aa3.19□□□□□ -1.9
SYN3-212ENST00000483062 A0A0A0MQY5 61 aa3.17□□□□□ -1.9
SYN3-212ENST00000483062 A8MU10 97 aa3.17□□□□□ -1.9
SYN3-212ENST00000483062 KRTAP12-1P59990 96 aa3.16□□□□□ -1.9
SYN3-212ENST00000483062 CDC42SE1Q9NRR8 79 aa3.16□□□□□ -1.9
SYN3-212ENST00000483062 KRTAP5-10Q6L8G5 202 aa3.14□□□□□ -1.91
SYN3-212ENST00000483062 KRTAP10-12P60413 245 aa3.12□□□□□ -1.91
SYN3-212ENST00000483062 KRTAP5-7Q6L8G8 165 aa3.07□□□□□ -1.92
SYN3-212ENST00000483062 TNP1P09430 55 aa3.03□□□□□ -1.92
SYN3-212ENST00000483062 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
SYN3-212ENST00000483062 MT4P47944 62 aa3□□□□□ -1.93
SYN3-212ENST00000483062 KRTAP25-1Q3LHN0 102 aa2.98□□□□□ -1.93
SYN3-212ENST00000483062 C10orf95Q9H7T3 257 aa2.98□□□□□ -1.93
SYN3-212ENST00000483062 PRAC1Q96KF2 57 aa2.97□□□□□ -1.93
SYN3-212ENST00000483062 KRTAP19-3Q7Z4W3 81 aa2.96□□□□□ -1.94
SYN3-212ENST00000483062 ROMO1P60602 79 aa2.95□□□□□ -1.94
SYN3-212ENST00000483062 KRTAP19-7Q3SYF9 63 aa2.95□□□□□ -1.94
SYN3-212ENST00000483062 KRTAP5-4Q6L8H1 288 aa2.95□□□□□ -1.94
SYN3-212ENST00000483062 MT1EP04732 61 aa2.93□□□□□ -1.94
SYN3-212ENST00000483062 SPRR5A0A1B0GTR4 108 aa2.9□□□□□ -1.95
SYN3-212ENST00000483062 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
SYN3-212ENST00000483062 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
SYN3-212ENST00000483062 PP632Q6XCG6 107 aa2.87□□□□□ -1.95
SYN3-212ENST00000483062 MT1GP13640 62 aa2.85□□□□□ -1.95
SYN3-212ENST00000483062 LCE3AQ5TA76 89 aa2.84□□□□□ -1.95
SYN3-212ENST00000483062 KRTAP9-6A8MVA2 160 aa2.82□□□□□ -1.96
SYN3-212ENST00000483062 AHNAKQ09666 5890 aaKnown RBP2.81□□□□□ -1.96
SYN3-212ENST00000483062 KRTAP19-5Q3LI72 72 aa2.8□□□□□ -1.96
SYN3-212ENST00000483062 MT1MQ8N339 61 aa2.8□□□□□ -1.96
SYN3-212ENST00000483062 KRTAP12-3P60328 96 aa2.78□□□□□ -1.96
SYN3-212ENST00000483062 KRTAP20-2Q3LI61 65 aa2.77□□□□□ -1.97
SYN3-212ENST00000483062 MT1LQ93083 61 aa2.76□□□□□ -1.97
SYN3-212ENST00000483062 KRTAP4-3Q9BYR4 195 aa2.76□□□□□ -1.97
SYN3-212ENST00000483062 LCE3CQ5T5A8 94 aa2.74□□□□□ -1.97
SYN3-212ENST00000483062 MUC5ACP98088 5654 aa2.72□□□□□ -1.97
SYN3-212ENST00000483062 MUC5BQ9HC84 5762 aaPredicted RBP2.71□□□□□ -1.98
SYN3-212ENST00000483062 NDUFAF8A1L188 74 aa2.67□□□□□ -1.98
SYN3-212ENST00000483062 KRTAP5-5Q701N2 237 aaPredicted RBP2.65□□□□□ -1.99
SYN3-212ENST00000483062 SYNE1Q8NF91 8797 aaKnown RBP2.64□□□□□ -1.99
SYN3-212ENST00000483062 KRTAP12-4P60329 112 aa2.6□□□□□ -1.99
SYN3-212ENST00000483062 KRTAP5-8O75690 187 aa2.57□□□□□ -2
SYN3-212ENST00000483062 OBSCNQ5VST9 7968 aa2.53□□□□□ -2
SYN3-212ENST00000483062 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
SYN3-212ENST00000483062 LCE3EQ5T5B0 92 aa2.49□□□□□ -2.01
SYN3-212ENST00000483062 LUZP6Q538Z0 58 aa2.43□□□□□ -2.02
SYN3-212ENST00000483062 MT1AP04731 61 aa2.35□□□□□ -2.03
SYN3-212ENST00000483062 KRTAP6-1Q3LI64 71 aa2.33□□□□□ -2.04
SYN3-212ENST00000483062 KRTAP6-2Q3LI66 62 aa2.28□□□□□ -2.04
SYN3-212ENST00000483062 INE1O15225 51 aa2.16□□□□□ -2.06
SYN3-212ENST00000483062 LCE1CQ5T751 118 aa2.09□□□□□ -2.07
SYN3-212ENST00000483062 LCE1BQ5T7P3 118 aa2.09□□□□□ -2.07
SYN3-212ENST00000483062 LCE3DQ9BYE3 92 aa1.99□□□□□ -2.09
SYN3-212ENST00000483062 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
SYN3-212ENST00000483062 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
SYN3-212ENST00000483062 KRTAP21-2Q3LI59 83 aa1.56□□□□□ -2.16
SYN3-212ENST00000483062 PRM1P04553 51 aa1.48□□□□□ -2.17
SYN3-212ENST00000483062 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
SYN3-212ENST00000483062 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 74.1 ms