RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 MT1LQ93083 61 aa6.91□□□□□ -1.3
R3HDM1-215ENST00000483021 H7BZZ5 65 aa6.88□□□□□ -1.31
R3HDM1-215ENST00000483021 MT4P47944 62 aa6.87□□□□□ -1.31
R3HDM1-215ENST00000483021 A0A1B0GU69 56 aa6.86□□□□□ -1.31
R3HDM1-215ENST00000483021 KRTAP4-7Q9BYR0 210 aa6.83□□□□□ -1.32
R3HDM1-215ENST00000483021 TNP1P09430 55 aa6.81□□□□□ -1.32
R3HDM1-215ENST00000483021 LCE3AQ5TA76 89 aa6.81□□□□□ -1.32
R3HDM1-215ENST00000483021 C10orf95Q9H7T3 257 aa6.81□□□□□ -1.32
R3HDM1-215ENST00000483021 A8MU10 97 aa6.79□□□□□ -1.32
R3HDM1-215ENST00000483021 CCDC179H3BU77 68 aa6.77□□□□□ -1.33
R3HDM1-215ENST00000483021 KRTAP5-4Q6L8H1 288 aa6.76□□□□□ -1.33
R3HDM1-215ENST00000483021 AHNAK2Q8IVF2 5795 aa6.76□□□□□ -1.33
R3HDM1-215ENST00000483021 KRTAP4-3Q9BYR4 195 aa6.74□□□□□ -1.33
R3HDM1-215ENST00000483021 KRTAP15-1Q3LI76 137 aa6.7□□□□□ -1.34
R3HDM1-215ENST00000483021 ATP5EP56381 51 aaPredicted RBP6.64□□□□□ -1.35
R3HDM1-215ENST00000483021 KRTAP4-11Q9BYQ6 195 aa6.63□□□□□ -1.35
R3HDM1-215ENST00000483021 PRR15LQ9BU68 103 aa6.62□□□□□ -1.35
R3HDM1-215ENST00000483021 KRTAP5-10Q6L8G5 202 aa6.61□□□□□ -1.35
R3HDM1-215ENST00000483021 KRTAP12-3P60328 96 aa6.57□□□□□ -1.36
R3HDM1-215ENST00000483021 TMEM258P61165 79 aa6.55□□□□□ -1.36
R3HDM1-215ENST00000483021 KRTAP4-2Q9BYR5 136 aa6.53□□□□□ -1.36
R3HDM1-215ENST00000483021 LINC01558Q9Y6Z2 57 aa6.44□□□□□ -1.38
R3HDM1-215ENST00000483021 PCP4P48539 62 aa6.43□□□□□ -1.38
R3HDM1-215ENST00000483021 KRTAP5-3Q6L8H2 238 aa6.41□□□□□ -1.38
R3HDM1-215ENST00000483021 KRTAP5-5Q701N2 237 aaPredicted RBP6.4□□□□□ -1.38
R3HDM1-215ENST00000483021 KRTAP20-2Q3LI61 65 aa6.39□□□□□ -1.39
R3HDM1-215ENST00000483021 KRTAP5-7Q6L8G8 165 aa6.39□□□□□ -1.39
R3HDM1-215ENST00000483021 UQCR11O14957 56 aa6.37□□□□□ -1.39
R3HDM1-215ENST00000483021 SPRR5A0A1B0GTR4 108 aa6.36□□□□□ -1.39
R3HDM1-215ENST00000483021 KRTAP12-4P60329 112 aa6.31□□□□□ -1.4
R3HDM1-215ENST00000483021 KRTAP25-1Q3LHN0 102 aa6.31□□□□□ -1.4
R3HDM1-215ENST00000483021 SYNE1Q8NF91 8797 aaKnown RBP6.28□□□□□ -1.4
R3HDM1-215ENST00000483021 A0A0A0MQY5 61 aa6.22□□□□□ -1.41
R3HDM1-215ENST00000483021 V9GYY9 64 aa6.19□□□□□ -1.42
R3HDM1-215ENST00000483021 MIR22HGQ0VDD5 57 aa6.18□□□□□ -1.42
R3HDM1-215ENST00000483021 K7ERS5 55 aa6.16□□□□□ -1.42
R3HDM1-215ENST00000483021 Q1T7F1 81 aa6.11□□□□□ -1.43
R3HDM1-215ENST00000483021 PSPHP1O15172 72 aa6.09□□□□□ -1.43
R3HDM1-215ENST00000483021 RPS28P62857 69 aaKnown RBP6.05□□□□□ -1.44
R3HDM1-215ENST00000483021 LCE3CQ5T5A8 94 aa6.01□□□□□ -1.45
R3HDM1-215ENST00000483021 A6NED7 52 aa5.92□□□□□ -1.46
R3HDM1-215ENST00000483021 MT1AP04731 61 aa5.89□□□□□ -1.47
R3HDM1-215ENST00000483021 KRTAP5-2Q701N4 177 aa5.89□□□□□ -1.47
R3HDM1-215ENST00000483021 KRTAP6-1Q3LI64 71 aa5.84□□□□□ -1.47
R3HDM1-215ENST00000483021 CDC42SE1Q9NRR8 79 aa5.78□□□□□ -1.48
R3HDM1-215ENST00000483021 KRTAP5-8O75690 187 aa5.69□□□□□ -1.5
R3HDM1-215ENST00000483021 ROMO1P60602 79 aa5.66□□□□□ -1.5
R3HDM1-215ENST00000483021 KRTAP9-6A8MVA2 160 aa5.64□□□□□ -1.51
R3HDM1-215ENST00000483021 KRTAP6-2Q3LI66 62 aa5.63□□□□□ -1.51
R3HDM1-215ENST00000483021 OBSCNQ5VST9 7968 aa5.62□□□□□ -1.51
R3HDM1-215ENST00000483021 AHNAKQ09666 5890 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-215ENST00000483021 MUC5ACP98088 5654 aa5.6□□□□□ -1.51
R3HDM1-215ENST00000483021 MUC5BQ9HC84 5762 aaPredicted RBP5.59□□□□□ -1.51
R3HDM1-215ENST00000483021 MT3P25713 68 aa5.41□□□□□ -1.54
R3HDM1-215ENST00000483021 BRK1Q8WUW1 75 aa5.38□□□□□ -1.55
R3HDM1-215ENST00000483021 KRTAP5-1Q6L8H4 278 aa5.31□□□□□ -1.56
R3HDM1-215ENST00000483021 PRO0628Q9UI54 55 aa5.25□□□□□ -1.57
R3HDM1-215ENST00000483021 PRAC1Q96KF2 57 aa5.13□□□□□ -1.59
R3HDM1-215ENST00000483021 PMAIP1Q13794 54 aa5.09□□□□□ -1.59
R3HDM1-215ENST00000483021 LCE1EQ5T753 118 aa5.03□□□□□ -1.6
R3HDM1-215ENST00000483021 NDUFAF8A1L188 74 aa4.89□□□□□ -1.63
R3HDM1-215ENST00000483021 LCE1FQ5T754 118 aa4.78□□□□□ -1.64
R3HDM1-215ENST00000483021 KTN1-AS1Q86SY8 53 aa4.78□□□□□ -1.64
R3HDM1-215ENST00000483021 LCE1BQ5T7P3 118 aa4.72□□□□□ -1.65
R3HDM1-215ENST00000483021 LCE1CQ5T751 118 aa4.67□□□□□ -1.66
R3HDM1-215ENST00000483021 KRTAP5-11Q6L8G4 156 aa4.47□□□□□ -1.69
R3HDM1-215ENST00000483021 LCE3DQ9BYE3 92 aa4.3□□□□□ -1.72
R3HDM1-215ENST00000483021 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.23□□□□□ -1.73
R3HDM1-215ENST00000483021 LUZP6Q538Z0 58 aa4.08□□□□□ -1.76
R3HDM1-215ENST00000483021 LCE3EQ5T5B0 92 aa4.08□□□□□ -1.76
R3HDM1-215ENST00000483021 PHGR1C9JFL3 82 aa3.87□□□□□ -1.79
R3HDM1-215ENST00000483021 KRTAP21-2Q3LI59 83 aa3.86□□□□□ -1.79
R3HDM1-215ENST00000483021 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
R3HDM1-215ENST00000483021 MUC19Q7Z5P9 8384 aa3.49□□□□□ -1.85
R3HDM1-215ENST00000483021 INE1O15225 51 aa3.22□□□□□ -1.89
R3HDM1-215ENST00000483021 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.94
R3HDM1-215ENST00000483021 PRM1P04553 51 aa2.86□□□□□ -1.95
R3HDM1-215ENST00000483021 MUC16Q8WXI7 14507 aa2.46□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 10.7 ms