RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-206ENST00000482745 SPRR2EP22531 72 aa4.03□□□□□ -1.76
HLA-DQA1-206ENST00000482745 SPRR2BP35325 72 aa4.03□□□□□ -1.76
HLA-DQA1-206ENST00000482745 SPRR2AP35326 72 aa4.03□□□□□ -1.76
HLA-DQA1-206ENST00000482745 KRTAP4-8A0A0G2JLE6 195 aa4.02□□□□□ -1.77
HLA-DQA1-206ENST00000482745 KRTAP4-8Q9BYQ9 185 aa4.02□□□□□ -1.77
HLA-DQA1-206ENST00000482745 KRTAP10-7P60409 375 aaPredicted RBP4.01□□□□□ -1.77
HLA-DQA1-206ENST00000482745 KRTAP10-12P60413 245 aa3.97□□□□□ -1.77
HLA-DQA1-206ENST00000482745 LCE1AQ5T7P2 110 aa3.95□□□□□ -1.78
HLA-DQA1-206ENST00000482745 KRTAP2-3P0C7H8 128 aa3.95□□□□□ -1.78
HLA-DQA1-206ENST00000482745 KRTAP2-4Q9BYR9 128 aa3.95□□□□□ -1.78
HLA-DQA1-206ENST00000482745 SPRR2DP22532 72 aa3.89□□□□□ -1.79
HLA-DQA1-206ENST00000482745 LOC100996750A0A140TA64 210 aa3.87□□□□□ -1.79
HLA-DQA1-206ENST00000482745 KRTAP4-6Q9BYQ5 205 aa3.87□□□□□ -1.79
HLA-DQA1-206ENST00000482745 LCE3AQ5TA76 89 aa3.86□□□□□ -1.79
HLA-DQA1-206ENST00000482745 KRTAP2-2Q9BYT5 123 aa3.82□□□□□ -1.8
HLA-DQA1-206ENST00000482745 KRTAP2-1Q9BYU5 128 aa3.82□□□□□ -1.8
HLA-DQA1-206ENST00000482745 LCE3BQ5TA77 95 aa3.78□□□□□ -1.8
HLA-DQA1-206ENST00000482745 KRTAP19-7Q3SYF9 63 aa3.74□□□□□ -1.81
HLA-DQA1-206ENST00000482745 MT1EP04732 61 aa3.72□□□□□ -1.81
HLA-DQA1-206ENST00000482745 LCE5AQ5TCM9 118 aa3.68□□□□□ -1.82
HLA-DQA1-206ENST00000482745 KRTAP19-3Q7Z4W3 81 aa3.68□□□□□ -1.82
HLA-DQA1-206ENST00000482745 KRTAP12-3P60328 96 aa3.68□□□□□ -1.82
HLA-DQA1-206ENST00000482745 KRTAP19-5Q3LI72 72 aa3.67□□□□□ -1.82
HLA-DQA1-206ENST00000482745 DSTQ03001 7570 aaKnown RBP3.64□□□□□ -1.83
HLA-DQA1-206ENST00000482745 MT1GP13640 62 aa3.59□□□□□ -1.84
HLA-DQA1-206ENST00000482745 MT1LQ93083 61 aa3.55□□□□□ -1.84
HLA-DQA1-206ENST00000482745 MT1MQ8N339 61 aa3.54□□□□□ -1.84
HLA-DQA1-206ENST00000482745 KRTAP4-9Q9BYQ8 210 aa3.52□□□□□ -1.85
HLA-DQA1-206ENST00000482745 LCE3CQ5T5A8 94 aa3.49□□□□□ -1.85
HLA-DQA1-206ENST00000482745 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
HLA-DQA1-206ENST00000482745 LCE1DQ5T752 114 aa3.43□□□□□ -1.86
HLA-DQA1-206ENST00000482745 MT4P47944 62 aa3.41□□□□□ -1.86
HLA-DQA1-206ENST00000482745 LCE4AQ5TA78 99 aa3.41□□□□□ -1.86
HLA-DQA1-206ENST00000482745 KRTAP4-7Q9BYR0 210 aa3.4□□□□□ -1.87
HLA-DQA1-206ENST00000482745 GPR98Q8WXG9 6306 aa3.38□□□□□ -1.87
HLA-DQA1-206ENST00000482745 HMCN1Q96RW7 5635 aa3.37□□□□□ -1.87
HLA-DQA1-206ENST00000482745 KRTAP5-4Q6L8H1 288 aa3.35□□□□□ -1.87
HLA-DQA1-206ENST00000482745 KRTAP9-6A8MVA2 160 aa3.34□□□□□ -1.88
HLA-DQA1-206ENST00000482745 KRTAP5-3Q6L8H2 238 aa3.32□□□□□ -1.88
HLA-DQA1-206ENST00000482745 KRTAP19-4Q3LI73 84 aa3.31□□□□□ -1.88
HLA-DQA1-206ENST00000482745 AHNAK2Q8IVF2 5795 aa3.23□□□□□ -1.89
HLA-DQA1-206ENST00000482745 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
HLA-DQA1-206ENST00000482745 KRTAP4-12Q9BQ66 201 aa3.19□□□□□ -1.9
HLA-DQA1-206ENST00000482745 KRTAP20-2Q3LI61 65 aa3.18□□□□□ -1.9
HLA-DQA1-206ENST00000482745 KRTAP5-10Q6L8G5 202 aa3.17□□□□□ -1.9
HLA-DQA1-206ENST00000482745 KRTAP12-4P60329 112 aa3.16□□□□□ -1.9
HLA-DQA1-206ENST00000482745 SYNE1Q8NF91 8797 aaKnown RBP3.12□□□□□ -1.91
HLA-DQA1-206ENST00000482745 KRTAP9-9Q9BYP9 154 aa3.11□□□□□ -1.91
HLA-DQA1-206ENST00000482745 KRTAP9-4Q9BYQ2 154 aa3.11□□□□□ -1.91
HLA-DQA1-206ENST00000482745 KRTAP5-7Q6L8G8 165 aa3.04□□□□□ -1.92
HLA-DQA1-206ENST00000482745 MT1AP04731 61 aa3.02□□□□□ -1.93
HLA-DQA1-206ENST00000482745 KRTAP6-1Q3LI64 71 aa3.01□□□□□ -1.93
HLA-DQA1-206ENST00000482745 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
HLA-DQA1-206ENST00000482745 KRTAP4-2Q9BYR5 136 aa2.92□□□□□ -1.94
HLA-DQA1-206ENST00000482745 KRTAP4-11Q9BYQ6 195 aa2.9□□□□□ -1.95
HLA-DQA1-206ENST00000482745 KRTAP6-2Q3LI66 62 aa2.88□□□□□ -1.95
HLA-DQA1-206ENST00000482745 OBSCNQ5VST9 7968 aa2.8□□□□□ -1.96
HLA-DQA1-206ENST00000482745 KRTAP5-8O75690 187 aa2.79□□□□□ -1.96
HLA-DQA1-206ENST00000482745 MT3P25713 68 aa2.76□□□□□ -1.97
HLA-DQA1-206ENST00000482745 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
HLA-DQA1-206ENST00000482745 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
HLA-DQA1-206ENST00000482745 PRM1P04553 51 aa2.73□□□□□ -1.97
HLA-DQA1-206ENST00000482745 MUC5BQ9HC84 5762 aaPredicted RBP2.67□□□□□ -1.98
HLA-DQA1-206ENST00000482745 MUC5ACP98088 5654 aa2.65□□□□□ -1.99
HLA-DQA1-206ENST00000482745 AHNAKQ09666 5890 aaKnown RBP2.64□□□□□ -1.99
HLA-DQA1-206ENST00000482745 KRTAP5-1Q6L8H4 278 aa2.63□□□□□ -1.99
HLA-DQA1-206ENST00000482745 LCE1EQ5T753 118 aa2.51□□□□□ -2.01
HLA-DQA1-206ENST00000482745 LCE1BQ5T7P3 118 aa2.41□□□□□ -2.02
HLA-DQA1-206ENST00000482745 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
HLA-DQA1-206ENST00000482745 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
HLA-DQA1-206ENST00000482745 LCE1FQ5T754 118 aa2.28□□□□□ -2.04
HLA-DQA1-206ENST00000482745 KRTAP5-11Q6L8G4 156 aa2.12□□□□□ -2.07
HLA-DQA1-206ENST00000482745 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
HLA-DQA1-206ENST00000482745 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
HLA-DQA1-206ENST00000482745 KRTAP4-4Q9BYR3 166 aa1.84□□□□□ -2.12
HLA-DQA1-206ENST00000482745 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
HLA-DQA1-206ENST00000482745 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
HLA-DQA1-206ENST00000482745 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 57 ms