RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 KRTAP19-5Q3LI72 72 aa7.42□□□□□ -1.22
TRAPPC12-220ENST00000482645 KRTAP23-1A1A580 65 aa7.41□□□□□ -1.22
TRAPPC12-220ENST00000482645 LCE1AQ5T7P2 110 aa7.37□□□□□ -1.23
TRAPPC12-220ENST00000482645 PP632Q6XCG6 107 aa7.37□□□□□ -1.23
TRAPPC12-220ENST00000482645 MT1EP04732 61 aa7.35□□□□□ -1.23
TRAPPC12-220ENST00000482645 KRTAP12-3P60328 96 aa7.27□□□□□ -1.25
TRAPPC12-220ENST00000482645 SPRR2DP22532 72 aa7.18□□□□□ -1.26
TRAPPC12-220ENST00000482645 KRTAP19-3Q7Z4W3 81 aa7.18□□□□□ -1.26
TRAPPC12-220ENST00000482645 KRTAP15-1Q3LI76 137 aa7.13□□□□□ -1.27
TRAPPC12-220ENST00000482645 LCE5AQ5TCM9 118 aa7.11□□□□□ -1.27
TRAPPC12-220ENST00000482645 MT1LQ93083 61 aa7.11□□□□□ -1.27
TRAPPC12-220ENST00000482645 KRTAP20-1Q3LI63 56 aa7.08□□□□□ -1.28
TRAPPC12-220ENST00000482645 MT1GP13640 62 aa7.05□□□□□ -1.28
TRAPPC12-220ENST00000482645 KRTAP2-3P0C7H8 128 aa7.01□□□□□ -1.29
TRAPPC12-220ENST00000482645 KRTAP2-4Q9BYR9 128 aa7.01□□□□□ -1.29
TRAPPC12-220ENST00000482645 MT1MQ8N339 61 aa6.96□□□□□ -1.29
TRAPPC12-220ENST00000482645 NDUFAF8A1L188 74 aa6.94□□□□□ -1.3
TRAPPC12-220ENST00000482645 LCE3BQ5TA77 95 aa6.94□□□□□ -1.3
TRAPPC12-220ENST00000482645 DSTQ03001 7570 aaKnown RBP6.94□□□□□ -1.3
TRAPPC12-220ENST00000482645 KRTAP4-7Q9BYR0 210 aa6.84□□□□□ -1.31
TRAPPC12-220ENST00000482645 KRTAP4-3Q9BYR4 195 aa6.83□□□□□ -1.32
TRAPPC12-220ENST00000482645 KRTAP2-2Q9BYT5 123 aa6.81□□□□□ -1.32
TRAPPC12-220ENST00000482645 KRTAP2-1Q9BYU5 128 aa6.81□□□□□ -1.32
TRAPPC12-220ENST00000482645 KRTAP19-4Q3LI73 84 aa6.76□□□□□ -1.33
TRAPPC12-220ENST00000482645 LCE3CQ5T5A8 94 aa6.76□□□□□ -1.33
TRAPPC12-220ENST00000482645 LOC100996750A0A140TA64 210 aa6.66□□□□□ -1.34
TRAPPC12-220ENST00000482645 KRTAP4-6Q9BYQ5 205 aa6.66□□□□□ -1.34
TRAPPC12-220ENST00000482645 A0A0A0MQY5 61 aa6.53□□□□□ -1.36
TRAPPC12-220ENST00000482645 LUZP6Q538Z0 58 aa6.53□□□□□ -1.36
TRAPPC12-220ENST00000482645 KRTAP9-6A8MVA2 160 aa6.38□□□□□ -1.39
TRAPPC12-220ENST00000482645 SPRR5A0A1B0GTR4 108 aa6.37□□□□□ -1.39
TRAPPC12-220ENST00000482645 KRTAP4-9Q9BYQ8 210 aa6.35□□□□□ -1.39
TRAPPC12-220ENST00000482645 LCE4AQ5TA78 99 aa6.32□□□□□ -1.4
TRAPPC12-220ENST00000482645 KRTAP5-5Q701N2 237 aaPredicted RBP6.3□□□□□ -1.4
TRAPPC12-220ENST00000482645 MT4P47944 62 aa6.28□□□□□ -1.4
TRAPPC12-220ENST00000482645 KRTAP5-4Q6L8H1 288 aa6.28□□□□□ -1.4
TRAPPC12-220ENST00000482645 LCE1DQ5T752 114 aa6.24□□□□□ -1.41
TRAPPC12-220ENST00000482645 HMCN1Q96RW7 5635 aa6.14□□□□□ -1.43
TRAPPC12-220ENST00000482645 KRTAP12-4P60329 112 aa6.04□□□□□ -1.44
TRAPPC12-220ENST00000482645 MT1AP04731 61 aa6.04□□□□□ -1.44
TRAPPC12-220ENST00000482645 SYNE1Q8NF91 8797 aaKnown RBP6.01□□□□□ -1.45
TRAPPC12-220ENST00000482645 KRTAP6-1Q3LI64 71 aa6□□□□□ -1.45
TRAPPC12-220ENST00000482645 INE1O15225 51 aa5.94□□□□□ -1.46
TRAPPC12-220ENST00000482645 KRTAP20-2Q3LI61 65 aa5.94□□□□□ -1.46
TRAPPC12-220ENST00000482645 KRTAP9-4Q9BYQ2 154 aa5.79□□□□□ -1.48
TRAPPC12-220ENST00000482645 AHNAK2Q8IVF2 5795 aa5.72□□□□□ -1.49
TRAPPC12-220ENST00000482645 KRTAP5-3Q6L8H2 238 aa5.72□□□□□ -1.49
TRAPPC12-220ENST00000482645 KRTAP6-2Q3LI66 62 aa5.65□□□□□ -1.5
TRAPPC12-220ENST00000482645 GPR98Q8WXG9 6306 aa5.65□□□□□ -1.51
TRAPPC12-220ENST00000482645 KRTAP5-2Q701N4 177 aa5.59□□□□□ -1.51
TRAPPC12-220ENST00000482645 MT3P25713 68 aa5.51□□□□□ -1.53
TRAPPC12-220ENST00000482645 KRTAP5-10Q6L8G5 202 aa5.48□□□□□ -1.53
TRAPPC12-220ENST00000482645 OBSCNQ5VST9 7968 aa5.31□□□□□ -1.56
TRAPPC12-220ENST00000482645 KRTAP4-11Q9BYQ6 195 aa5.29□□□□□ -1.56
TRAPPC12-220ENST00000482645 KRTAP9-9Q9BYP9 154 aa5.23□□□□□ -1.57
TRAPPC12-220ENST00000482645 KRTAP5-7Q6L8G8 165 aa5.18□□□□□ -1.58
TRAPPC12-220ENST00000482645 KRTAP5-8O75690 187 aa5.09□□□□□ -1.59
TRAPPC12-220ENST00000482645 KRTAP4-2Q9BYR5 136 aa5.08□□□□□ -1.6
TRAPPC12-220ENST00000482645 LCE3DQ9BYE3 92 aa5.01□□□□□ -1.61
TRAPPC12-220ENST00000482645 KRTAP4-12Q9BQ66 201 aa4.96□□□□□ -1.62
TRAPPC12-220ENST00000482645 KRTAP5-1Q6L8H4 278 aa4.94□□□□□ -1.62
TRAPPC12-220ENST00000482645 LCE1EQ5T753 118 aa4.88□□□□□ -1.63
TRAPPC12-220ENST00000482645 MUC5ACP98088 5654 aa4.84□□□□□ -1.64
TRAPPC12-220ENST00000482645 LCE3EQ5T5B0 92 aa4.83□□□□□ -1.64
TRAPPC12-220ENST00000482645 LCE1BQ5T7P3 118 aa4.67□□□□□ -1.66
TRAPPC12-220ENST00000482645 MUC5BQ9HC84 5762 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC12-220ENST00000482645 LCE1CQ5T751 118 aa4.56□□□□□ -1.68
TRAPPC12-220ENST00000482645 AHNAKQ09666 5890 aaKnown RBP4.52□□□□□ -1.69
TRAPPC12-220ENST00000482645 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.18□□□□□ -1.74
TRAPPC12-220ENST00000482645 PRM1P04553 51 aa4.09□□□□□ -1.75
TRAPPC12-220ENST00000482645 KRTAP5-11Q6L8G4 156 aa4.07□□□□□ -1.76
TRAPPC12-220ENST00000482645 KRTAP21-2Q3LI59 83 aa3.92□□□□□ -1.78
TRAPPC12-220ENST00000482645 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
TRAPPC12-220ENST00000482645 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
TRAPPC12-220ENST00000482645 PHGR1C9JFL3 82 aa3.51□□□□□ -1.85
TRAPPC12-220ENST00000482645 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
TRAPPC12-220ENST00000482645 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
TRAPPC12-220ENST00000482645 MUC16Q8WXI7 14507 aa2.25□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 10.2 ms