RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 KRTAP8-1Q8IUC2 63 aa4.03□□□□□ -1.76
SPTLC1-206ENST00000482632 KRTAP2-1Q9BYU5 128 aa4.03□□□□□ -1.76
SPTLC1-206ENST00000482632 KRTAP12-2P59991 146 aa4.02□□□□□ -1.77
SPTLC1-206ENST00000482632 SMIM26A0A096LP01 95 aa4.01□□□□□ -1.77
SPTLC1-206ENST00000482632 SPRR2FQ96RM1 72 aa4□□□□□ -1.77
SPTLC1-206ENST00000482632 A8MU10 97 aa3.98□□□□□ -1.77
SPTLC1-206ENST00000482632 LINC01558Q9Y6Z2 57 aa3.98□□□□□ -1.77
SPTLC1-206ENST00000482632 KRTAP12-1P59990 96 aa3.96□□□□□ -1.78
SPTLC1-206ENST00000482632 SPRR2EP22531 72 aa3.95□□□□□ -1.78
SPTLC1-206ENST00000482632 SPRR2BP35325 72 aa3.95□□□□□ -1.78
SPTLC1-206ENST00000482632 SPRR2AP35326 72 aa3.95□□□□□ -1.78
SPTLC1-206ENST00000482632 KRTAP10-12P60413 245 aa3.95□□□□□ -1.78
SPTLC1-206ENST00000482632 UQCR11O14957 56 aa3.89□□□□□ -1.79
SPTLC1-206ENST00000482632 PSPHP1O15172 72 aa3.85□□□□□ -1.79
SPTLC1-206ENST00000482632 V9GYY9 64 aa3.85□□□□□ -1.79
SPTLC1-206ENST00000482632 SPRR2DP22532 72 aa3.82□□□□□ -1.8
SPTLC1-206ENST00000482632 MIR22HGQ0VDD5 57 aa3.82□□□□□ -1.8
SPTLC1-206ENST00000482632 KRTAP5-1Q6L8H4 278 aa3.82□□□□□ -1.8
SPTLC1-206ENST00000482632 Q1T7F1 81 aa3.79□□□□□ -1.8
SPTLC1-206ENST00000482632 TNP1P09430 55 aa3.78□□□□□ -1.8
SPTLC1-206ENST00000482632 LCE3CQ5T5A8 94 aa3.78□□□□□ -1.8
SPTLC1-206ENST00000482632 C10orf95Q9H7T3 257 aa3.78□□□□□ -1.8
SPTLC1-206ENST00000482632 DSTQ03001 7570 aaKnown RBP3.77□□□□□ -1.81
SPTLC1-206ENST00000482632 K7ERS5 55 aa3.77□□□□□ -1.81
SPTLC1-206ENST00000482632 A6NED7 52 aa3.74□□□□□ -1.81
SPTLC1-206ENST00000482632 KRTAP19-5Q3LI72 72 aa3.71□□□□□ -1.82
SPTLC1-206ENST00000482632 KRTAP19-7Q3SYF9 63 aa3.71□□□□□ -1.82
SPTLC1-206ENST00000482632 MT1EP04732 61 aa3.7□□□□□ -1.82
SPTLC1-206ENST00000482632 LCE3AQ5TA76 89 aa3.7□□□□□ -1.82
SPTLC1-206ENST00000482632 KRTAP5-4Q6L8H1 288 aa3.7□□□□□ -1.82
SPTLC1-206ENST00000482632 RPS28P62857 69 aaKnown RBP3.68□□□□□ -1.82
SPTLC1-206ENST00000482632 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
SPTLC1-206ENST00000482632 HMCN1Q96RW7 5635 aa3.65□□□□□ -1.83
SPTLC1-206ENST00000482632 AHNAK2Q8IVF2 5795 aa3.64□□□□□ -1.83
SPTLC1-206ENST00000482632 KRTAP9-6A8MVA2 160 aa3.64□□□□□ -1.83
SPTLC1-206ENST00000482632 KRTAP19-3Q7Z4W3 81 aa3.64□□□□□ -1.83
SPTLC1-206ENST00000482632 KRTAP25-1Q3LHN0 102 aa3.6□□□□□ -1.83
SPTLC1-206ENST00000482632 PP632Q6XCG6 107 aa3.57□□□□□ -1.84
SPTLC1-206ENST00000482632 MT1GP13640 62 aa3.56□□□□□ -1.84
SPTLC1-206ENST00000482632 MT1LQ93083 61 aa3.56□□□□□ -1.84
SPTLC1-206ENST00000482632 CDC42SE1Q9NRR8 79 aa3.56□□□□□ -1.84
SPTLC1-206ENST00000482632 KRTAP12-3P60328 96 aa3.54□□□□□ -1.84
SPTLC1-206ENST00000482632 KRTAP5-10Q6L8G5 202 aa3.53□□□□□ -1.84
SPTLC1-206ENST00000482632 MT1MQ8N339 61 aa3.52□□□□□ -1.85
SPTLC1-206ENST00000482632 ROMO1P60602 79 aa3.49□□□□□ -1.85
SPTLC1-206ENST00000482632 KRTAP4-3Q9BYR4 195 aa3.46□□□□□ -1.86
SPTLC1-206ENST00000482632 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
SPTLC1-206ENST00000482632 KRTAP5-7Q6L8G8 165 aa3.43□□□□□ -1.86
SPTLC1-206ENST00000482632 SPRR5A0A1B0GTR4 108 aa3.42□□□□□ -1.86
SPTLC1-206ENST00000482632 MT4P47944 62 aa3.42□□□□□ -1.86
SPTLC1-206ENST00000482632 BRK1Q8WUW1 75 aa3.37□□□□□ -1.87
SPTLC1-206ENST00000482632 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
SPTLC1-206ENST00000482632 KRTAP5-5Q701N2 237 aaPredicted RBP3.16□□□□□ -1.9
SPTLC1-206ENST00000482632 PMAIP1Q13794 54 aa3.15□□□□□ -1.91
SPTLC1-206ENST00000482632 AHNAKQ09666 5890 aaKnown RBP3.14□□□□□ -1.91
SPTLC1-206ENST00000482632 KRTAP12-4P60329 112 aa3.12□□□□□ -1.91
SPTLC1-206ENST00000482632 MUC5BQ9HC84 5762 aaPredicted RBP3.07□□□□□ -1.92
SPTLC1-206ENST00000482632 KRTAP20-2Q3LI61 65 aa3.07□□□□□ -1.92
SPTLC1-206ENST00000482632 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
SPTLC1-206ENST00000482632 MUC5ACP98088 5654 aa3.07□□□□□ -1.92
SPTLC1-206ENST00000482632 MT1AP04731 61 aa3.03□□□□□ -1.92
SPTLC1-206ENST00000482632 KRTAP6-1Q3LI64 71 aa3.01□□□□□ -1.93
SPTLC1-206ENST00000482632 SYNE1Q8NF91 8797 aaKnown RBP3□□□□□ -1.93
SPTLC1-206ENST00000482632 PRO0628Q9UI54 55 aa2.99□□□□□ -1.93
SPTLC1-206ENST00000482632 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
SPTLC1-206ENST00000482632 KRTAP5-8O75690 187 aa2.88□□□□□ -1.95
SPTLC1-206ENST00000482632 KRTAP6-2Q3LI66 62 aa2.87□□□□□ -1.95
SPTLC1-206ENST00000482632 KTN1-AS1Q86SY8 53 aa2.85□□□□□ -1.95
SPTLC1-206ENST00000482632 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
SPTLC1-206ENST00000482632 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
SPTLC1-206ENST00000482632 LUZP6Q538Z0 58 aa2.61□□□□□ -1.99
SPTLC1-206ENST00000482632 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
SPTLC1-206ENST00000482632 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
SPTLC1-206ENST00000482632 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
SPTLC1-206ENST00000482632 PRM1P04553 51 aa1.81□□□□□ -2.12
SPTLC1-206ENST00000482632 INE1O15225 51 aa1.72□□□□□ -2.13
SPTLC1-206ENST00000482632 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
SPTLC1-206ENST00000482632 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 35.4 ms