RNA–Protein interactions for RNA: ENST00000482527.1

ABCB1-205, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 4

Gene ABCB1, Length 555 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-205ENST00000482527 SSPOA2VEC9 5147 aa3.7□□□□□ -1.82
ABCB1-205ENST00000482527 MT1FP04733 61 aa3.7□□□□□ -1.82
ABCB1-205ENST00000482527 KRTAP10-5P60370 271 aa3.7□□□□□ -1.82
ABCB1-205ENST00000482527 KRTAP9-3Q9BYQ3 159 aa3.7□□□□□ -1.82
ABCB1-205ENST00000482527 MT1XP80297 61 aa3.69□□□□□ -1.82
ABCB1-205ENST00000482527 USH2AO75445 5202 aa3.67□□□□□ -1.82
ABCB1-205ENST00000482527 SYNE2Q8WXH0 6885 aaKnown RBP3.67□□□□□ -1.82
ABCB1-205ENST00000482527 MT1BP07438 61 aa3.66□□□□□ -1.82
ABCB1-205ENST00000482527 FCGBPQ9Y6R7 5405 aaPredicted RBP3.62□□□□□ -1.83
ABCB1-205ENST00000482527 MACF1Q9UPN3 7388 aaKnown RBP3.62□□□□□ -1.83
ABCB1-205ENST00000482527 LCE3CQ5T5A8 94 aa3.59□□□□□ -1.83
ABCB1-205ENST00000482527 LCE5AQ5TCM9 118 aa3.58□□□□□ -1.84
ABCB1-205ENST00000482527 KRTAP10-7P60409 375 aaPredicted RBP3.54□□□□□ -1.84
ABCB1-205ENST00000482527 KRTAP19-5Q3LI72 72 aa3.49□□□□□ -1.85
ABCB1-205ENST00000482527 KRTAP20-1Q3LI63 56 aa3.48□□□□□ -1.85
ABCB1-205ENST00000482527 KRTAP6-3Q3LI67 103 aa3.47□□□□□ -1.85
ABCB1-205ENST00000482527 NEBP20929 6669 aa3.45□□□□□ -1.86
ABCB1-205ENST00000482527 KRTAP2-3P0C7H8 128 aa3.44□□□□□ -1.86
ABCB1-205ENST00000482527 KRTAP2-4Q9BYR9 128 aa3.44□□□□□ -1.86
ABCB1-205ENST00000482527 KRTAP2-1Q9BYU5 128 aa3.44□□□□□ -1.86
ABCB1-205ENST00000482527 MUC12Q9UKN1 5478 aa3.42□□□□□ -1.86
ABCB1-205ENST00000482527 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.88
ABCB1-205ENST00000482527 KRTAP19-7Q3SYF9 63 aa3.28□□□□□ -1.88
ABCB1-205ENST00000482527 KRTAP19-6Q3LI70 58 aa3.27□□□□□ -1.89
ABCB1-205ENST00000482527 KMT2DO14686 5537 aa3.27□□□□□ -1.89
ABCB1-205ENST00000482527 LCE1AQ5T7P2 110 aa3.26□□□□□ -1.89
ABCB1-205ENST00000482527 MT1EP04732 61 aa3.23□□□□□ -1.89
ABCB1-205ENST00000482527 MT1LQ93083 61 aa3.23□□□□□ -1.89
ABCB1-205ENST00000482527 MDN1Q9NU22 5596 aa3.19□□□□□ -1.9
ABCB1-205ENST00000482527 GPR98Q8WXG9 6306 aa3.18□□□□□ -1.9
ABCB1-205ENST00000482527 MT3P25713 68 aa3.12□□□□□ -1.91
ABCB1-205ENST00000482527 KRTAP5-9P26371 169 aa3.11□□□□□ -1.91
ABCB1-205ENST00000482527 KRTAP2-2Q9BYT5 123 aa3.09□□□□□ -1.91
ABCB1-205ENST00000482527 MT1GP13640 62 aa3.07□□□□□ -1.92
ABCB1-205ENST00000482527 KRTAP12-4P60329 112 aa3.05□□□□□ -1.92
ABCB1-205ENST00000482527 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.01□□□□□ -1.93
ABCB1-205ENST00000482527 KRTAP19-3Q7Z4W3 81 aa2.99□□□□□ -1.93
ABCB1-205ENST00000482527 MT1MQ8N339 61 aa2.99□□□□□ -1.93
ABCB1-205ENST00000482527 MT1AP04731 61 aa2.98□□□□□ -1.93
ABCB1-205ENST00000482527 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
ABCB1-205ENST00000482527 SPRR2EP22531 72 aa2.9□□□□□ -1.95
ABCB1-205ENST00000482527 SPRR2BP35325 72 aa2.9□□□□□ -1.95
ABCB1-205ENST00000482527 SPRR2AP35326 72 aa2.9□□□□□ -1.95
ABCB1-205ENST00000482527 KRTAP4-3Q9BYR4 195 aa2.85□□□□□ -1.95
ABCB1-205ENST00000482527 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
ABCB1-205ENST00000482527 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
ABCB1-205ENST00000482527 SPRR2DP22532 72 aa2.81□□□□□ -1.96
ABCB1-205ENST00000482527 SPRR2FQ96RM1 72 aa2.81□□□□□ -1.96
ABCB1-205ENST00000482527 DSTQ03001 7570 aaKnown RBP2.81□□□□□ -1.96
ABCB1-205ENST00000482527 KRTAP5-10Q6L8G5 202 aa2.8□□□□□ -1.96
ABCB1-205ENST00000482527 KRTAP5-7Q6L8G8 165 aa2.76□□□□□ -1.97
ABCB1-205ENST00000482527 AHNAK2Q8IVF2 5795 aa2.75□□□□□ -1.97
ABCB1-205ENST00000482527 HMCN1Q96RW7 5635 aa2.71□□□□□ -1.98
ABCB1-205ENST00000482527 KRTAP6-1Q3LI64 71 aa2.68□□□□□ -1.98
ABCB1-205ENST00000482527 PRM1P04553 51 aa2.67□□□□□ -1.98
ABCB1-205ENST00000482527 KRTAP5-11Q6L8G4 156 aa2.66□□□□□ -1.98
ABCB1-205ENST00000482527 KRTAP5-5Q701N2 237 aaPredicted RBP2.66□□□□□ -1.98
ABCB1-205ENST00000482527 KRTAP5-4Q6L8H1 288 aa2.56□□□□□ -2
ABCB1-205ENST00000482527 KRTAP6-2Q3LI66 62 aa2.54□□□□□ -2
ABCB1-205ENST00000482527 SYNE1Q8NF91 8797 aaKnown RBP2.54□□□□□ -2
ABCB1-205ENST00000482527 KRTAP5-1Q6L8H4 278 aa2.53□□□□□ -2
ABCB1-205ENST00000482527 MT4P47944 62 aa2.51□□□□□ -2.01
ABCB1-205ENST00000482527 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
ABCB1-205ENST00000482527 AHNAKQ09666 5890 aaKnown RBP2.44□□□□□ -2.02
ABCB1-205ENST00000482527 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
ABCB1-205ENST00000482527 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
ABCB1-205ENST00000482527 MUC5ACP98088 5654 aa2.36□□□□□ -2.03
ABCB1-205ENST00000482527 KRTAP20-2Q3LI61 65 aa2.25□□□□□ -2.05
ABCB1-205ENST00000482527 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
ABCB1-205ENST00000482527 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
ABCB1-205ENST00000482527 OBSCNQ5VST9 7968 aa2.15□□□□□ -2.07
ABCB1-205ENST00000482527 LCE1CQ5T751 118 aa1.92□□□□□ -2.1
ABCB1-205ENST00000482527 LCE1BQ5T7P3 118 aa1.92□□□□□ -2.1
ABCB1-205ENST00000482527 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
ABCB1-205ENST00000482527 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
ABCB1-205ENST00000482527 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
ABCB1-205ENST00000482527 MUC19Q7Z5P9 8384 aa1.28□□□□□ -2.2
ABCB1-205ENST00000482527 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 14.1 ms