RNA–Protein interactions for RNA: ENST00000482429.1

LTB-212, Transcript of lymphotoxin beta, humanhuman

TSL 2

Gene LTB, Length 1,388 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTB-212ENST00000482429 KRTAP4-9Q9BYQ8 210 aa8.03□□□□□ -1.12
LTB-212ENST00000482429 ROMO1P60602 79 aa7.93□□□□□ -1.14
LTB-212ENST00000482429 TNP1P09430 55 aa7.92□□□□□ -1.14
LTB-212ENST00000482429 LCE5AQ5TCM9 118 aa7.87□□□□□ -1.15
LTB-212ENST00000482429 PRO0628Q9UI54 55 aa7.86□□□□□ -1.15
LTB-212ENST00000482429 PMAIP1Q13794 54 aa7.82□□□□□ -1.16
LTB-212ENST00000482429 KRTAP25-1Q3LHN0 102 aa7.81□□□□□ -1.16
LTB-212ENST00000482429 LCE1DQ5T752 114 aa7.8□□□□□ -1.16
LTB-212ENST00000482429 KRTAP19-3Q7Z4W3 81 aa7.75□□□□□ -1.17
LTB-212ENST00000482429 KRTAP19-7Q3SYF9 63 aa7.72□□□□□ -1.17
LTB-212ENST00000482429 LCE3AQ5TA76 89 aa7.71□□□□□ -1.17
LTB-212ENST00000482429 MT1EP04732 61 aa7.68□□□□□ -1.18
LTB-212ENST00000482429 HMCN1Q96RW7 5635 aa7.67□□□□□ -1.18
LTB-212ENST00000482429 LCE4AQ5TA78 99 aa7.65□□□□□ -1.18
LTB-212ENST00000482429 MT4P47944 62 aa7.6□□□□□ -1.19
LTB-212ENST00000482429 AHNAK2Q8IVF2 5795 aa7.59□□□□□ -1.19
LTB-212ENST00000482429 KRTAP5-10Q6L8G5 202 aa7.58□□□□□ -1.2
LTB-212ENST00000482429 KRTAP19-5Q3LI72 72 aa7.53□□□□□ -1.2
LTB-212ENST00000482429 MT1GP13640 62 aa7.51□□□□□ -1.21
LTB-212ENST00000482429 KRTAP23-1A1A580 65 aa7.48□□□□□ -1.21
LTB-212ENST00000482429 PP632Q6XCG6 107 aa7.46□□□□□ -1.22
LTB-212ENST00000482429 PRAC1Q96KF2 57 aa7.45□□□□□ -1.22
LTB-212ENST00000482429 KRTAP5-4Q6L8H1 288 aa7.4□□□□□ -1.22
LTB-212ENST00000482429 KRTAP12-3P60328 96 aa7.38□□□□□ -1.23
LTB-212ENST00000482429 KRTAP5-7Q6L8G8 165 aa7.37□□□□□ -1.23
LTB-212ENST00000482429 MT1MQ8N339 61 aa7.35□□□□□ -1.23
LTB-212ENST00000482429 KRTAP4-6Q9BYQ5 205 aa7.34□□□□□ -1.23
LTB-212ENST00000482429 KTN1-AS1Q86SY8 53 aa7.33□□□□□ -1.24
LTB-212ENST00000482429 KRTAP5-3Q6L8H2 238 aa7.24□□□□□ -1.25
LTB-212ENST00000482429 MT1LQ93083 61 aa7.23□□□□□ -1.25
LTB-212ENST00000482429 KRTAP4-3Q9BYR4 195 aa7.17□□□□□ -1.26
LTB-212ENST00000482429 KRTAP15-1Q3LI76 137 aa7.13□□□□□ -1.27
LTB-212ENST00000482429 KRTAP20-2Q3LI61 65 aa7.01□□□□□ -1.29
LTB-212ENST00000482429 SPRR5A0A1B0GTR4 108 aa7□□□□□ -1.29
LTB-212ENST00000482429 KRTAP4-7Q9BYR0 210 aa6.98□□□□□ -1.29
LTB-212ENST00000482429 LCE3CQ5T5A8 94 aa6.88□□□□□ -1.31
LTB-212ENST00000482429 KRTAP5-5Q701N2 237 aaPredicted RBP6.83□□□□□ -1.32
LTB-212ENST00000482429 KRTAP19-4Q3LI73 84 aa6.82□□□□□ -1.32
LTB-212ENST00000482429 KRTAP12-4P60329 112 aa6.8□□□□□ -1.32
LTB-212ENST00000482429 LOC100996750A0A140TA64 210 aa6.57□□□□□ -1.36
LTB-212ENST00000482429 KRTAP4-11Q9BYQ6 195 aa6.56□□□□□ -1.36
LTB-212ENST00000482429 SYNE1Q8NF91 8797 aaKnown RBP6.55□□□□□ -1.36
LTB-212ENST00000482429 KRTAP9-6A8MVA2 160 aa6.53□□□□□ -1.36
LTB-212ENST00000482429 AHNAKQ09666 5890 aaKnown RBP6.39□□□□□ -1.39
LTB-212ENST00000482429 MUC5ACP98088 5654 aa6.39□□□□□ -1.39
LTB-212ENST00000482429 KRTAP5-2Q701N4 177 aa6.38□□□□□ -1.39
LTB-212ENST00000482429 KRTAP5-8O75690 187 aa6.34□□□□□ -1.39
LTB-212ENST00000482429 MUC5BQ9HC84 5762 aaPredicted RBP6.31□□□□□ -1.4
LTB-212ENST00000482429 MT1AP04731 61 aa6.16□□□□□ -1.42
LTB-212ENST00000482429 KRTAP6-1Q3LI64 71 aa6.15□□□□□ -1.43
LTB-212ENST00000482429 KRTAP9-9Q9BYP9 154 aa6.13□□□□□ -1.43
LTB-212ENST00000482429 LUZP6Q538Z0 58 aa6.02□□□□□ -1.45
LTB-212ENST00000482429 KRTAP9-4Q9BYQ2 154 aa6.02□□□□□ -1.45
LTB-212ENST00000482429 OBSCNQ5VST9 7968 aa6.01□□□□□ -1.45
LTB-212ENST00000482429 KRTAP6-2Q3LI66 62 aa5.99□□□□□ -1.45
LTB-212ENST00000482429 KRTAP5-1Q6L8H4 278 aa5.82□□□□□ -1.48
LTB-212ENST00000482429 H3BS24 57 aa5.72□□□□□ -1.49
LTB-212ENST00000482429 NDUFAF8A1L188 74 aa5.67□□□□□ -1.5
LTB-212ENST00000482429 MT3P25713 68 aa5.67□□□□□ -1.5
LTB-212ENST00000482429 LCE1EQ5T753 118 aa5.38□□□□□ -1.55
LTB-212ENST00000482429 KRTAP4-2Q9BYR5 136 aa5.12□□□□□ -1.59
LTB-212ENST00000482429 LCE3DQ9BYE3 92 aa5.09□□□□□ -1.59
LTB-212ENST00000482429 LCE1BQ5T7P3 118 aa5.05□□□□□ -1.6
LTB-212ENST00000482429 LCE1CQ5T751 118 aa4.99□□□□□ -1.61
LTB-212ENST00000482429 LCE3EQ5T5B0 92 aa4.91□□□□□ -1.62
LTB-212ENST00000482429 A0A0A0MQY5 61 aa4.84□□□□□ -1.63
LTB-212ENST00000482429 KRTAP4-12Q9BQ66 201 aa4.82□□□□□ -1.64
LTB-212ENST00000482429 KRTAP5-11Q6L8G4 156 aa4.65□□□□□ -1.67
LTB-212ENST00000482429 LCE1FQ5T754 118 aa4.61□□□□□ -1.67
LTB-212ENST00000482429 INE1O15225 51 aa4.58□□□□□ -1.68
LTB-212ENST00000482429 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.47□□□□□ -1.69
LTB-212ENST00000482429 PHGR1C9JFL3 82 aa4.41□□□□□ -1.7
LTB-212ENST00000482429 PRM1P04553 51 aa4.14□□□□□ -1.75
LTB-212ENST00000482429 KRTAP21-2Q3LI59 83 aa4.07□□□□□ -1.76
LTB-212ENST00000482429 KRTAP4-4Q9BYR3 166 aa3.77□□□□□ -1.81
LTB-212ENST00000482429 MUC19Q7Z5P9 8384 aa3.74□□□□□ -1.81
LTB-212ENST00000482429 KRTAP21-1Q3LI58 79 aa3.39□□□□□ -1.87
LTB-212ENST00000482429 MUC16Q8WXI7 14507 aa2.66□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 59.3 ms