RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 KRTAP2-1Q9BYU5 128 aa4.34□□□□□ -1.71
SORT1-204ENST00000482236 LCE3BQ5TA77 95 aa4.3□□□□□ -1.72
SORT1-204ENST00000482236 MIR22HGQ0VDD5 57 aa4.29□□□□□ -1.72
SORT1-204ENST00000482236 KRTAP25-1Q3LHN0 102 aa4.26□□□□□ -1.73
SORT1-204ENST00000482236 UQCR11O14957 56 aa4.25□□□□□ -1.73
SORT1-204ENST00000482236 KRTAP12-1P59990 96 aa4.25□□□□□ -1.73
SORT1-204ENST00000482236 MT1EP04732 61 aa4.16□□□□□ -1.74
SORT1-204ENST00000482236 TNP1P09430 55 aa4.16□□□□□ -1.74
SORT1-204ENST00000482236 KRTAP19-7Q3SYF9 63 aa4.15□□□□□ -1.75
SORT1-204ENST00000482236 KRTAP19-3Q7Z4W3 81 aa4.15□□□□□ -1.75
SORT1-204ENST00000482236 KRTAP19-5Q3LI72 72 aa4.14□□□□□ -1.75
SORT1-204ENST00000482236 K7ERS5 55 aa4.13□□□□□ -1.75
SORT1-204ENST00000482236 PP632Q6XCG6 107 aa4.12□□□□□ -1.75
SORT1-204ENST00000482236 LCE5AQ5TCM9 118 aa4.1□□□□□ -1.75
SORT1-204ENST00000482236 LUZP6Q538Z0 58 aa4.07□□□□□ -1.76
SORT1-204ENST00000482236 LCE3AQ5TA76 89 aa4.06□□□□□ -1.76
SORT1-204ENST00000482236 MT1GP13640 62 aa4.05□□□□□ -1.76
SORT1-204ENST00000482236 C10orf95Q9H7T3 257 aa4.05□□□□□ -1.76
SORT1-204ENST00000482236 KRTAP4-12Q9BQ66 201 aa4.03□□□□□ -1.76
SORT1-204ENST00000482236 NDUFAF8A1L188 74 aa4.02□□□□□ -1.77
SORT1-204ENST00000482236 KRTAP15-1Q3LI76 137 aa4.02□□□□□ -1.77
SORT1-204ENST00000482236 MT1LQ93083 61 aa3.98□□□□□ -1.77
SORT1-204ENST00000482236 KRTAP4-9Q9BYQ8 210 aa3.98□□□□□ -1.77
SORT1-204ENST00000482236 MT1MQ8N339 61 aa3.97□□□□□ -1.77
SORT1-204ENST00000482236 DSTQ03001 7570 aaKnown RBP3.95□□□□□ -1.78
SORT1-204ENST00000482236 KRTAP12-3P60328 96 aa3.92□□□□□ -1.78
SORT1-204ENST00000482236 MT4P47944 62 aa3.9□□□□□ -1.79
SORT1-204ENST00000482236 LCE4AQ5TA78 99 aa3.88□□□□□ -1.79
SORT1-204ENST00000482236 LCE1DQ5T752 114 aa3.87□□□□□ -1.79
SORT1-204ENST00000482236 KRTAP9-9Q9BYP9 154 aa3.87□□□□□ -1.79
SORT1-204ENST00000482236 KRTAP9-4Q9BYQ2 154 aa3.87□□□□□ -1.79
SORT1-204ENST00000482236 KRTAP4-3Q9BYR4 195 aa3.87□□□□□ -1.79
SORT1-204ENST00000482236 GPR98Q8WXG9 6306 aa3.87□□□□□ -1.79
SORT1-204ENST00000482236 KRTAP19-4Q3LI73 84 aa3.85□□□□□ -1.79
SORT1-204ENST00000482236 KRTAP4-7Q9BYR0 210 aa3.78□□□□□ -1.8
SORT1-204ENST00000482236 HMCN1Q96RW7 5635 aa3.74□□□□□ -1.81
SORT1-204ENST00000482236 KRTAP5-4Q6L8H1 288 aa3.7□□□□□ -1.82
SORT1-204ENST00000482236 KRTAP23-1A1A580 65 aa3.66□□□□□ -1.82
SORT1-204ENST00000482236 KRTAP12-4P60329 112 aa3.63□□□□□ -1.83
SORT1-204ENST00000482236 AHNAK2Q8IVF2 5795 aa3.58□□□□□ -1.84
SORT1-204ENST00000482236 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
SORT1-204ENST00000482236 KRTAP20-2Q3LI61 65 aa3.56□□□□□ -1.84
SORT1-204ENST00000482236 KRTAP5-5Q701N2 237 aaPredicted RBP3.56□□□□□ -1.84
SORT1-204ENST00000482236 SPRR5A0A1B0GTR4 108 aa3.54□□□□□ -1.84
SORT1-204ENST00000482236 KRTAP5-10Q6L8G5 202 aa3.53□□□□□ -1.84
SORT1-204ENST00000482236 KRTAP4-2Q9BYR5 136 aa3.51□□□□□ -1.85
SORT1-204ENST00000482236 KRTAP5-3Q6L8H2 238 aa3.49□□□□□ -1.85
SORT1-204ENST00000482236 KRTAP4-11Q9BYQ6 195 aa3.49□□□□□ -1.85
SORT1-204ENST00000482236 INE1O15225 51 aa3.47□□□□□ -1.85
SORT1-204ENST00000482236 MT1AP04731 61 aa3.4□□□□□ -1.87
SORT1-204ENST00000482236 KRTAP5-7Q6L8G8 165 aa3.4□□□□□ -1.87
SORT1-204ENST00000482236 SYNE1Q8NF91 8797 aaKnown RBP3.38□□□□□ -1.87
SORT1-204ENST00000482236 KRTAP6-1Q3LI64 71 aa3.37□□□□□ -1.87
SORT1-204ENST00000482236 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.88
SORT1-204ENST00000482236 KRTAP6-2Q3LI66 62 aa3.24□□□□□ -1.89
SORT1-204ENST00000482236 KRTAP5-2Q701N4 177 aa3.23□□□□□ -1.89
SORT1-204ENST00000482236 MT3P25713 68 aa3.15□□□□□ -1.91
SORT1-204ENST00000482236 KRTAP5-8O75690 187 aa3.1□□□□□ -1.91
SORT1-204ENST00000482236 OBSCNQ5VST9 7968 aa3.01□□□□□ -1.93
SORT1-204ENST00000482236 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
SORT1-204ENST00000482236 AHNAKQ09666 5890 aaKnown RBP2.96□□□□□ -1.94
SORT1-204ENST00000482236 MUC5BQ9HC84 5762 aaPredicted RBP2.94□□□□□ -1.94
SORT1-204ENST00000482236 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.95
SORT1-204ENST00000482236 LCE1EQ5T753 118 aa2.82□□□□□ -1.96
SORT1-204ENST00000482236 LCE1BQ5T7P3 118 aa2.78□□□□□ -1.96
SORT1-204ENST00000482236 LCE1CQ5T751 118 aa2.62□□□□□ -1.99
SORT1-204ENST00000482236 LCE3DQ9BYE3 92 aa2.62□□□□□ -1.99
SORT1-204ENST00000482236 LCE3EQ5T5B0 92 aa2.46□□□□□ -2.02
SORT1-204ENST00000482236 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.39□□□□□ -2.03
SORT1-204ENST00000482236 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
SORT1-204ENST00000482236 LCE1FQ5T754 118 aa2.31□□□□□ -2.04
SORT1-204ENST00000482236 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
SORT1-204ENST00000482236 PHGR1C9JFL3 82 aa2.15□□□□□ -2.07
SORT1-204ENST00000482236 KRTAP4-4Q9BYR3 166 aa2.07□□□□□ -2.08
SORT1-204ENST00000482236 PRM1P04553 51 aa2.05□□□□□ -2.08
SORT1-204ENST00000482236 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
SORT1-204ENST00000482236 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
SORT1-204ENST00000482236 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms