RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 A8MU10 97 aa4.45□□□□□ -1.7
HMGN1-213ENST00000482192 MT1EP04732 61 aa4.43□□□□□ -1.7
HMGN1-213ENST00000482192 TMEM258P61165 79 aa4.4□□□□□ -1.71
HMGN1-213ENST00000482192 LINC01558Q9Y6Z2 57 aa4.39□□□□□ -1.71
HMGN1-213ENST00000482192 PCP4P48539 62 aa4.38□□□□□ -1.71
HMGN1-213ENST00000482192 KRTAP19-3Q7Z4W3 81 aa4.38□□□□□ -1.71
HMGN1-213ENST00000482192 KRTAP19-5Q3LI72 72 aa4.36□□□□□ -1.71
HMGN1-213ENST00000482192 TNP1P09430 55 aa4.33□□□□□ -1.72
HMGN1-213ENST00000482192 C10orf95Q9H7T3 257 aa4.33□□□□□ -1.72
HMGN1-213ENST00000482192 UQCR11O14957 56 aa4.3□□□□□ -1.72
HMGN1-213ENST00000482192 MT1GP13640 62 aa4.29□□□□□ -1.72
HMGN1-213ENST00000482192 LCE3AQ5TA76 89 aa4.28□□□□□ -1.72
HMGN1-213ENST00000482192 PP632Q6XCG6 107 aa4.28□□□□□ -1.72
HMGN1-213ENST00000482192 DSTQ03001 7570 aaKnown RBP4.25□□□□□ -1.73
HMGN1-213ENST00000482192 KRTAP15-1Q3LI76 137 aa4.24□□□□□ -1.73
HMGN1-213ENST00000482192 MT1LQ93083 61 aa4.23□□□□□ -1.73
HMGN1-213ENST00000482192 MT1MQ8N339 61 aa4.21□□□□□ -1.74
HMGN1-213ENST00000482192 MIR22HGQ0VDD5 57 aa4.2□□□□□ -1.74
HMGN1-213ENST00000482192 V9GYY9 64 aa4.17□□□□□ -1.74
HMGN1-213ENST00000482192 K7ERS5 55 aa4.14□□□□□ -1.75
HMGN1-213ENST00000482192 PSPHP1O15172 72 aa4.13□□□□□ -1.75
HMGN1-213ENST00000482192 KRTAP12-3P60328 96 aa4.13□□□□□ -1.75
HMGN1-213ENST00000482192 Q1T7F1 81 aa4.12□□□□□ -1.75
HMGN1-213ENST00000482192 KRTAP25-1Q3LHN0 102 aa4.11□□□□□ -1.75
HMGN1-213ENST00000482192 KRTAP4-3Q9BYR4 195 aa4.1□□□□□ -1.75
HMGN1-213ENST00000482192 A0A0A0MQY5 61 aa4.09□□□□□ -1.75
HMGN1-213ENST00000482192 MT4P47944 62 aa4.01□□□□□ -1.77
HMGN1-213ENST00000482192 A6NED7 52 aa4□□□□□ -1.77
HMGN1-213ENST00000482192 KRTAP5-4Q6L8H1 288 aa4□□□□□ -1.77
HMGN1-213ENST00000482192 GPR98Q8WXG9 6306 aa3.99□□□□□ -1.77
HMGN1-213ENST00000482192 RPS28P62857 69 aaKnown RBP3.93□□□□□ -1.78
HMGN1-213ENST00000482192 CDC42SE1Q9NRR8 79 aa3.91□□□□□ -1.78
HMGN1-213ENST00000482192 HMCN1Q96RW7 5635 aa3.89□□□□□ -1.79
HMGN1-213ENST00000482192 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.88□□□□□ -1.79
HMGN1-213ENST00000482192 KRTAP5-5Q701N2 237 aaPredicted RBP3.86□□□□□ -1.79
HMGN1-213ENST00000482192 ROMO1P60602 79 aa3.84□□□□□ -1.79
HMGN1-213ENST00000482192 LCE3CQ5T5A8 94 aa3.8□□□□□ -1.8
HMGN1-213ENST00000482192 SPRR5A0A1B0GTR4 108 aa3.77□□□□□ -1.81
HMGN1-213ENST00000482192 KRTAP20-2Q3LI61 65 aa3.77□□□□□ -1.81
HMGN1-213ENST00000482192 KRTAP12-4P60329 112 aa3.76□□□□□ -1.81
HMGN1-213ENST00000482192 KRTAP5-10Q6L8G5 202 aa3.74□□□□□ -1.81
HMGN1-213ENST00000482192 KRTAP5-11Q6L8G4 156 aa3.7□□□□□ -1.82
HMGN1-213ENST00000482192 AHNAK2Q8IVF2 5795 aa3.7□□□□□ -1.82
HMGN1-213ENST00000482192 MT1AP04731 61 aa3.61□□□□□ -1.83
HMGN1-213ENST00000482192 KRTAP5-7Q6L8G8 165 aa3.6□□□□□ -1.83
HMGN1-213ENST00000482192 SYNE1Q8NF91 8797 aaKnown RBP3.59□□□□□ -1.83
HMGN1-213ENST00000482192 KRTAP9-6A8MVA2 160 aa3.57□□□□□ -1.84
HMGN1-213ENST00000482192 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
HMGN1-213ENST00000482192 KRTAP5-2Q701N4 177 aa3.51□□□□□ -1.85
HMGN1-213ENST00000482192 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
HMGN1-213ENST00000482192 BRK1Q8WUW1 75 aa3.45□□□□□ -1.86
HMGN1-213ENST00000482192 KRTAP6-2Q3LI66 62 aa3.42□□□□□ -1.86
HMGN1-213ENST00000482192 PRAC1Q96KF2 57 aa3.41□□□□□ -1.86
HMGN1-213ENST00000482192 KRTAP5-1Q6L8H4 278 aa3.33□□□□□ -1.88
HMGN1-213ENST00000482192 KRTAP5-8O75690 187 aa3.31□□□□□ -1.88
HMGN1-213ENST00000482192 MT3P25713 68 aa3.3□□□□□ -1.88
HMGN1-213ENST00000482192 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
HMGN1-213ENST00000482192 PMAIP1Q13794 54 aa3.24□□□□□ -1.89
HMGN1-213ENST00000482192 OBSCNQ5VST9 7968 aa3.23□□□□□ -1.89
HMGN1-213ENST00000482192 KRTAP4-4Q9BYR3 166 aa3.21□□□□□ -1.9
HMGN1-213ENST00000482192 MUC5ACP98088 5654 aa3.1□□□□□ -1.91
HMGN1-213ENST00000482192 AHNAKQ09666 5890 aaKnown RBP3.04□□□□□ -1.92
HMGN1-213ENST00000482192 MUC5BQ9HC84 5762 aaPredicted RBP3.02□□□□□ -1.93
HMGN1-213ENST00000482192 PRO0628Q9UI54 55 aa3□□□□□ -1.93
HMGN1-213ENST00000482192 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
HMGN1-213ENST00000482192 KTN1-AS1Q86SY8 53 aa2.88□□□□□ -1.95
HMGN1-213ENST00000482192 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.95
HMGN1-213ENST00000482192 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
HMGN1-213ENST00000482192 LCE3DQ9BYE3 92 aa2.75□□□□□ -1.97
HMGN1-213ENST00000482192 LUZP6Q538Z0 58 aa2.66□□□□□ -1.98
HMGN1-213ENST00000482192 LCE3EQ5T5B0 92 aa2.59□□□□□ -1.99
HMGN1-213ENST00000482192 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
HMGN1-213ENST00000482192 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
HMGN1-213ENST00000482192 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
HMGN1-213ENST00000482192 PRM1P04553 51 aa1.96□□□□□ -2.1
HMGN1-213ENST00000482192 INE1O15225 51 aa1.7□□□□□ -2.14
HMGN1-213ENST00000482192 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
HMGN1-213ENST00000482192 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 73.1 ms