RNA–Protein interactions for RNA: ENST00000481205.5

RTN1-206, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 3,169 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-206ENST00000481205 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.33□□□□□ -2.04
RTN1-206ENST00000481205 MT2AP02795 61 aa2.33□□□□□ -2.04
RTN1-206ENST00000481205 USH2AO75445 5202 aa2.31□□□□□ -2.04
RTN1-206ENST00000481205 KRTAP10-10P60014 251 aa2.3□□□□□ -2.04
RTN1-206ENST00000481205 KRTAP10-12P60413 245 aa2.28□□□□□ -2.04
RTN1-206ENST00000481205 SPRR2GQ9BYE4 73 aa2.28□□□□□ -2.04
RTN1-206ENST00000481205 LCE3AQ5TA76 89 aa2.24□□□□□ -2.05
RTN1-206ENST00000481205 MT1BP07438 61 aa2.22□□□□□ -2.05
RTN1-206ENST00000481205 GPR98Q8WXG9 6306 aa2.21□□□□□ -2.06
RTN1-206ENST00000481205 LCE1EQ5T753 118 aa2.21□□□□□ -2.06
RTN1-206ENST00000481205 FSIP2Q5CZC0 6907 aa2.2□□□□□ -2.06
RTN1-206ENST00000481205 MT3P25713 68 aa2.2□□□□□ -2.06
RTN1-206ENST00000481205 KRTAP19-8Q3LI54 63 aa2.19□□□□□ -2.06
RTN1-206ENST00000481205 KMT2DO14686 5537 aa2.19□□□□□ -2.06
RTN1-206ENST00000481205 LCE3DQ9BYE3 92 aa2.17□□□□□ -2.06
RTN1-206ENST00000481205 KRTAP10-5P60370 271 aa2.17□□□□□ -2.06
RTN1-206ENST00000481205 MT1XP80297 61 aa2.17□□□□□ -2.06
RTN1-206ENST00000481205 KRTAP5-9P26371 169 aa2.16□□□□□ -2.06
RTN1-206ENST00000481205 KRTAP8-1Q8IUC2 63 aa2.16□□□□□ -2.06
RTN1-206ENST00000481205 SSPOA2VEC9 5147 aa2.15□□□□□ -2.06
RTN1-206ENST00000481205 KRTAP12-3P60328 96 aa2.14□□□□□ -2.07
RTN1-206ENST00000481205 KRTAP10-7P60409 375 aaPredicted RBP2.12□□□□□ -2.07
RTN1-206ENST00000481205 KRTAP19-5Q3LI72 72 aa2.03□□□□□ -2.08
RTN1-206ENST00000481205 KRTAP19-6Q3LI70 58 aa2.02□□□□□ -2.09
RTN1-206ENST00000481205 FCGBPQ9Y6R7 5405 aaPredicted RBP2.01□□□□□ -2.09
RTN1-206ENST00000481205 KRTAP5-11Q6L8G4 156 aa1.99□□□□□ -2.09
RTN1-206ENST00000481205 MUC12Q9UKN1 5478 aa1.97□□□□□ -2.09
RTN1-206ENST00000481205 KRTAP5-4Q6L8H1 288 aa1.96□□□□□ -2.1
RTN1-206ENST00000481205 MACF1Q9UPN3 7388 aaKnown RBP1.94□□□□□ -2.1
RTN1-206ENST00000481205 KRTAP19-7Q3SYF9 63 aa1.94□□□□□ -2.1
RTN1-206ENST00000481205 SYNE2Q8WXH0 6885 aaKnown RBP1.92□□□□□ -2.1
RTN1-206ENST00000481205 CRCT1Q9UGL9 99 aa1.92□□□□□ -2.1
RTN1-206ENST00000481205 KRTAP6-3Q3LI67 103 aa1.91□□□□□ -2.1
RTN1-206ENST00000481205 KRTAP9-6A8MVA2 160 aa1.9□□□□□ -2.11
RTN1-206ENST00000481205 KRTAP2-3P0C7H8 128 aa1.89□□□□□ -2.11
RTN1-206ENST00000481205 KRTAP2-4Q9BYR9 128 aa1.89□□□□□ -2.11
RTN1-206ENST00000481205 KRTAP2-1Q9BYU5 128 aa1.89□□□□□ -2.11
RTN1-206ENST00000481205 DSTQ03001 7570 aaKnown RBP1.89□□□□□ -2.11
RTN1-206ENST00000481205 MT1EP04732 61 aa1.88□□□□□ -2.11
RTN1-206ENST00000481205 KRTAP5-1Q6L8H4 278 aa1.88□□□□□ -2.11
RTN1-206ENST00000481205 KRTAP4-4Q9BYR3 166 aa1.87□□□□□ -2.11
RTN1-206ENST00000481205 MDN1Q9NU22 5596 aa1.86□□□□□ -2.11
RTN1-206ENST00000481205 MT1LQ93083 61 aa1.86□□□□□ -2.11
RTN1-206ENST00000481205 KRTAP12-4P60329 112 aa1.84□□□□□ -2.12
RTN1-206ENST00000481205 KRTAP4-3Q9BYR4 195 aa1.84□□□□□ -2.12
RTN1-206ENST00000481205 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
RTN1-206ENST00000481205 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
RTN1-206ENST00000481205 OBSCNQ5VST9 7968 aa1.82□□□□□ -2.12
RTN1-206ENST00000481205 SPRR2FQ96RM1 72 aa1.79□□□□□ -2.12
RTN1-206ENST00000481205 MT1GP13640 62 aa1.77□□□□□ -2.13
RTN1-206ENST00000481205 KRTAP19-3Q7Z4W3 81 aa1.77□□□□□ -2.13
RTN1-206ENST00000481205 MT1MQ8N339 61 aa1.76□□□□□ -2.13
RTN1-206ENST00000481205 KRTAP5-2Q701N4 177 aa1.73□□□□□ -2.13
RTN1-206ENST00000481205 KRTAP5-8O75690 187 aa1.71□□□□□ -2.13
RTN1-206ENST00000481205 SYNE1Q8NF91 8797 aaKnown RBP1.71□□□□□ -2.14
RTN1-206ENST00000481205 PRM1P04553 51 aa1.69□□□□□ -2.14
RTN1-206ENST00000481205 SPRR2EP22531 72 aa1.68□□□□□ -2.14
RTN1-206ENST00000481205 SPRR2BP35325 72 aa1.68□□□□□ -2.14
RTN1-206ENST00000481205 SPRR2AP35326 72 aa1.68□□□□□ -2.14
RTN1-206ENST00000481205 NEBP20929 6669 aa1.66□□□□□ -2.14
RTN1-206ENST00000481205 SPRR2DP22532 72 aa1.62□□□□□ -2.15
RTN1-206ENST00000481205 KRTAP5-5Q701N2 237 aaPredicted RBP1.61□□□□□ -2.15
RTN1-206ENST00000481205 KRTAP6-1Q3LI64 71 aa1.6□□□□□ -2.15
RTN1-206ENST00000481205 MT1AP04731 61 aa1.57□□□□□ -2.16
RTN1-206ENST00000481205 AHNAK2Q8IVF2 5795 aa1.53□□□□□ -2.16
RTN1-206ENST00000481205 KRTAP20-1Q3LI63 56 aa1.48□□□□□ -2.17
RTN1-206ENST00000481205 KRTAP6-2Q3LI66 62 aa1.45□□□□□ -2.18
RTN1-206ENST00000481205 MT4P47944 62 aa1.43□□□□□ -2.18
RTN1-206ENST00000481205 KRTAP20-2Q3LI61 65 aa1.38□□□□□ -2.19
RTN1-206ENST00000481205 KRTAP5-7Q6L8G8 165 aa1.36□□□□□ -2.19
RTN1-206ENST00000481205 LCE1CQ5T751 118 aa1.34□□□□□ -2.19
RTN1-206ENST00000481205 LCE1BQ5T7P3 118 aa1.34□□□□□ -2.19
RTN1-206ENST00000481205 MUC5ACP98088 5654 aa1.25□□□□□ -2.21
RTN1-206ENST00000481205 KRTAP5-10Q6L8G5 202 aa1.22□□□□□ -2.21
RTN1-206ENST00000481205 KRTAP21-1Q3LI58 79 aa1.09□□□□□ -2.23
RTN1-206ENST00000481205 KRTAP21-2Q3LI59 83 aa1.03□□□□□ -2.24
RTN1-206ENST00000481205 PHGR1C9JFL3 82 aa0.86□□□□□ -2.27
RTN1-206ENST00000481205 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 77.3 ms