RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 MDN1Q9NU22 5596 aa4.51□□□□□ -1.69
SHROOM3-205ENST00000481002 KTN1-AS1Q86SY8 53 aa4.48□□□□□ -1.69
SHROOM3-205ENST00000481002 KRTAP12-3P60328 96 aa4.47□□□□□ -1.69
SHROOM3-205ENST00000481002 KRTAP19-3Q7Z4W3 81 aa4.47□□□□□ -1.69
SHROOM3-205ENST00000481002 LCE5AQ5TCM9 118 aa4.45□□□□□ -1.7
SHROOM3-205ENST00000481002 SPRR2DP22532 72 aa4.44□□□□□ -1.7
SHROOM3-205ENST00000481002 MT1LQ93083 61 aa4.43□□□□□ -1.7
SHROOM3-205ENST00000481002 MT1GP13640 62 aa4.42□□□□□ -1.7
SHROOM3-205ENST00000481002 PP632Q6XCG6 107 aa4.41□□□□□ -1.7
SHROOM3-205ENST00000481002 KRTAP20-1Q3LI63 56 aa4.4□□□□□ -1.71
SHROOM3-205ENST00000481002 KRTAP2-3P0C7H8 128 aa4.39□□□□□ -1.71
SHROOM3-205ENST00000481002 KRTAP2-4Q9BYR9 128 aa4.39□□□□□ -1.71
SHROOM3-205ENST00000481002 MT1MQ8N339 61 aa4.33□□□□□ -1.72
SHROOM3-205ENST00000481002 LCE3BQ5TA77 95 aa4.3□□□□□ -1.72
SHROOM3-205ENST00000481002 KRTAP15-1Q3LI76 137 aa4.29□□□□□ -1.72
SHROOM3-205ENST00000481002 KRTAP19-4Q3LI73 84 aa4.28□□□□□ -1.72
SHROOM3-205ENST00000481002 KRTAP2-2Q9BYT5 123 aa4.27□□□□□ -1.73
SHROOM3-205ENST00000481002 KRTAP2-1Q9BYU5 128 aa4.27□□□□□ -1.73
SHROOM3-205ENST00000481002 KRTAP4-7Q9BYR0 210 aa4.21□□□□□ -1.74
SHROOM3-205ENST00000481002 KRTAP4-3Q9BYR4 195 aa4.21□□□□□ -1.74
SHROOM3-205ENST00000481002 PRAC1Q96KF2 57 aa4.19□□□□□ -1.74
SHROOM3-205ENST00000481002 DSTQ03001 7570 aaKnown RBP4.18□□□□□ -1.74
SHROOM3-205ENST00000481002 LCE3CQ5T5A8 94 aa4.15□□□□□ -1.75
SHROOM3-205ENST00000481002 LOC100996750A0A140TA64 210 aa3.97□□□□□ -1.77
SHROOM3-205ENST00000481002 LCE4AQ5TA78 99 aa3.97□□□□□ -1.77
SHROOM3-205ENST00000481002 KRTAP5-4Q6L8H1 288 aa3.96□□□□□ -1.78
SHROOM3-205ENST00000481002 KRTAP5-5Q701N2 237 aaPredicted RBP3.96□□□□□ -1.78
SHROOM3-205ENST00000481002 KRTAP9-6A8MVA2 160 aa3.91□□□□□ -1.78
SHROOM3-205ENST00000481002 KRTAP4-9Q9BYQ8 210 aa3.91□□□□□ -1.78
SHROOM3-205ENST00000481002 LCE1DQ5T752 114 aa3.87□□□□□ -1.79
SHROOM3-205ENST00000481002 MT4P47944 62 aa3.84□□□□□ -1.79
SHROOM3-205ENST00000481002 KRTAP4-6Q9BYQ5 205 aa3.8□□□□□ -1.8
SHROOM3-205ENST00000481002 MT1AP04731 61 aa3.77□□□□□ -1.81
SHROOM3-205ENST00000481002 SPRR5A0A1B0GTR4 108 aa3.76□□□□□ -1.81
SHROOM3-205ENST00000481002 KRTAP12-4P60329 112 aa3.76□□□□□ -1.81
SHROOM3-205ENST00000481002 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
SHROOM3-205ENST00000481002 HMCN1Q96RW7 5635 aa3.72□□□□□ -1.81
SHROOM3-205ENST00000481002 KRTAP20-2Q3LI61 65 aa3.7□□□□□ -1.82
SHROOM3-205ENST00000481002 SYNE1Q8NF91 8797 aaKnown RBP3.69□□□□□ -1.82
SHROOM3-205ENST00000481002 KRTAP9-4Q9BYQ2 154 aa3.62□□□□□ -1.83
SHROOM3-205ENST00000481002 KRTAP5-3Q6L8H2 238 aa3.6□□□□□ -1.83
SHROOM3-205ENST00000481002 LUZP6Q538Z0 58 aa3.57□□□□□ -1.84
SHROOM3-205ENST00000481002 KRTAP5-2Q701N4 177 aa3.53□□□□□ -1.84
SHROOM3-205ENST00000481002 GPR98Q8WXG9 6306 aa3.5□□□□□ -1.85
SHROOM3-205ENST00000481002 NDUFAF8A1L188 74 aa3.49□□□□□ -1.85
SHROOM3-205ENST00000481002 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
SHROOM3-205ENST00000481002 AHNAK2Q8IVF2 5795 aa3.45□□□□□ -1.86
SHROOM3-205ENST00000481002 KRTAP5-10Q6L8G5 202 aa3.44□□□□□ -1.86
SHROOM3-205ENST00000481002 MT3P25713 68 aa3.43□□□□□ -1.86
SHROOM3-205ENST00000481002 H3BS24 57 aa3.35□□□□□ -1.87
SHROOM3-205ENST00000481002 KRTAP4-11Q9BYQ6 195 aa3.31□□□□□ -1.88
SHROOM3-205ENST00000481002 KRTAP5-7Q6L8G8 165 aa3.27□□□□□ -1.89
SHROOM3-205ENST00000481002 A0A0A0MQY5 61 aa3.23□□□□□ -1.89
SHROOM3-205ENST00000481002 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
SHROOM3-205ENST00000481002 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
SHROOM3-205ENST00000481002 KRTAP5-1Q6L8H4 278 aa3.11□□□□□ -1.91
SHROOM3-205ENST00000481002 LCE1EQ5T753 118 aa3.1□□□□□ -1.91
SHROOM3-205ENST00000481002 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
SHROOM3-205ENST00000481002 INE1O15225 51 aa2.99□□□□□ -1.93
SHROOM3-205ENST00000481002 KRTAP9-9Q9BYP9 154 aa2.96□□□□□ -1.94
SHROOM3-205ENST00000481002 MUC5ACP98088 5654 aa2.94□□□□□ -1.94
SHROOM3-205ENST00000481002 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
SHROOM3-205ENST00000481002 KRTAP4-2Q9BYR5 136 aa2.89□□□□□ -1.95
SHROOM3-205ENST00000481002 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
SHROOM3-205ENST00000481002 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
SHROOM3-205ENST00000481002 AHNAKQ09666 5890 aaKnown RBP2.79□□□□□ -1.96
SHROOM3-205ENST00000481002 MUC5BQ9HC84 5762 aaPredicted RBP2.79□□□□□ -1.96
SHROOM3-205ENST00000481002 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
SHROOM3-205ENST00000481002 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
SHROOM3-205ENST00000481002 KRTAP4-12Q9BQ66 201 aa2.49□□□□□ -2.01
SHROOM3-205ENST00000481002 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
SHROOM3-205ENST00000481002 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
SHROOM3-205ENST00000481002 PRM1P04553 51 aa2.36□□□□□ -2.03
SHROOM3-205ENST00000481002 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
SHROOM3-205ENST00000481002 KRTAP4-4Q9BYR3 166 aa2.18□□□□□ -2.06
SHROOM3-205ENST00000481002 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
SHROOM3-205ENST00000481002 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
SHROOM3-205ENST00000481002 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 73.1 ms