RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 KRTAP20-1Q3LI63 56 aa5.64□□□□□ -1.51
PKNOX1-206ENST00000480179 KRTAP8-1Q8IUC2 63 aa5.63□□□□□ -1.51
PKNOX1-206ENST00000480179 KRTAP19-4Q3LI73 84 aa5.6□□□□□ -1.51
PKNOX1-206ENST00000480179 KRTAP5-9P26371 169 aa5.57□□□□□ -1.52
PKNOX1-206ENST00000480179 KRTAP12-3P60328 96 aa5.55□□□□□ -1.52
PKNOX1-206ENST00000480179 LCE1DQ5T752 114 aa5.54□□□□□ -1.52
PKNOX1-206ENST00000480179 KMT2DO14686 5537 aa5.5□□□□□ -1.53
PKNOX1-206ENST00000480179 KRTAP4-7Q9BYR0 210 aa5.48□□□□□ -1.53
PKNOX1-206ENST00000480179 KRTAP19-5Q3LI72 72 aa5.48□□□□□ -1.53
PKNOX1-206ENST00000480179 LCE4AQ5TA78 99 aa5.48□□□□□ -1.53
PKNOX1-206ENST00000480179 MDN1Q9NU22 5596 aa5.48□□□□□ -1.53
PKNOX1-206ENST00000480179 KRTAP2-3P0C7H8 128 aa5.44□□□□□ -1.54
PKNOX1-206ENST00000480179 KRTAP2-4Q9BYR9 128 aa5.44□□□□□ -1.54
PKNOX1-206ENST00000480179 SPRR2FQ96RM1 72 aa5.39□□□□□ -1.55
PKNOX1-206ENST00000480179 NDUFAF8A1L188 74 aa5.37□□□□□ -1.55
PKNOX1-206ENST00000480179 SPRR2EP22531 72 aa5.37□□□□□ -1.55
PKNOX1-206ENST00000480179 SPRR2BP35325 72 aa5.37□□□□□ -1.55
PKNOX1-206ENST00000480179 SPRR2AP35326 72 aa5.37□□□□□ -1.55
PKNOX1-206ENST00000480179 SPRR5A0A1B0GTR4 108 aa5.35□□□□□ -1.55
PKNOX1-206ENST00000480179 KRTAP5-3Q6L8H2 238 aa5.35□□□□□ -1.55
PKNOX1-206ENST00000480179 KRTAP4-9Q9BYQ8 210 aa5.34□□□□□ -1.55
PKNOX1-206ENST00000480179 KRTAP19-7Q3SYF9 63 aa5.32□□□□□ -1.56
PKNOX1-206ENST00000480179 LUZP6Q538Z0 58 aa5.29□□□□□ -1.56
PKNOX1-206ENST00000480179 KRTAP4-2Q9BYR5 136 aa5.26□□□□□ -1.57
PKNOX1-206ENST00000480179 KRTAP2-2Q9BYT5 123 aa5.25□□□□□ -1.57
PKNOX1-206ENST00000480179 KRTAP2-1Q9BYU5 128 aa5.25□□□□□ -1.57
PKNOX1-206ENST00000480179 MT1EP04732 61 aa5.23□□□□□ -1.57
PKNOX1-206ENST00000480179 LCE1AQ5T7P2 110 aa5.23□□□□□ -1.57
PKNOX1-206ENST00000480179 SPRR2DP22532 72 aa5.2□□□□□ -1.58
PKNOX1-206ENST00000480179 LCE5AQ5TCM9 118 aa5.2□□□□□ -1.58
PKNOX1-206ENST00000480179 LCE3CQ5T5A8 94 aa5.19□□□□□ -1.58
PKNOX1-206ENST00000480179 KRTAP4-11Q9BYQ6 195 aa5.17□□□□□ -1.58
PKNOX1-206ENST00000480179 MT1LQ93083 61 aa5.16□□□□□ -1.58
PKNOX1-206ENST00000480179 KRTAP19-3Q7Z4W3 81 aa4.97□□□□□ -1.61
PKNOX1-206ENST00000480179 KRTAP9-6A8MVA2 160 aa4.94□□□□□ -1.62
PKNOX1-206ENST00000480179 A0A0A0MQY5 61 aa4.93□□□□□ -1.62
PKNOX1-206ENST00000480179 MT1MQ8N339 61 aa4.92□□□□□ -1.62
PKNOX1-206ENST00000480179 MT1GP13640 62 aa4.92□□□□□ -1.62
PKNOX1-206ENST00000480179 KRTAP4-3Q9BYR4 195 aa4.9□□□□□ -1.62
PKNOX1-206ENST00000480179 DSTQ03001 7570 aaKnown RBP4.86□□□□□ -1.63
PKNOX1-206ENST00000480179 GPR98Q8WXG9 6306 aa4.84□□□□□ -1.64
PKNOX1-206ENST00000480179 MT4P47944 62 aa4.55□□□□□ -1.68
PKNOX1-206ENST00000480179 HMCN1Q96RW7 5635 aa4.52□□□□□ -1.69
PKNOX1-206ENST00000480179 AHNAK2Q8IVF2 5795 aa4.43□□□□□ -1.7
PKNOX1-206ENST00000480179 KRTAP5-4Q6L8H1 288 aa4.4□□□□□ -1.71
PKNOX1-206ENST00000480179 KRTAP5-10Q6L8G5 202 aa4.38□□□□□ -1.71
PKNOX1-206ENST00000480179 KRTAP5-5Q701N2 237 aaPredicted RBP4.38□□□□□ -1.71
PKNOX1-206ENST00000480179 MT1AP04731 61 aa4.36□□□□□ -1.71
PKNOX1-206ENST00000480179 KRTAP6-1Q3LI64 71 aa4.36□□□□□ -1.71
PKNOX1-206ENST00000480179 INE1O15225 51 aa4.34□□□□□ -1.71
PKNOX1-206ENST00000480179 KRTAP5-7Q6L8G8 165 aa4.26□□□□□ -1.73
PKNOX1-206ENST00000480179 SYNE1Q8NF91 8797 aaKnown RBP4.2□□□□□ -1.74
PKNOX1-206ENST00000480179 KRTAP20-2Q3LI61 65 aa4.18□□□□□ -1.74
PKNOX1-206ENST00000480179 KRTAP12-4P60329 112 aa4.15□□□□□ -1.74
PKNOX1-206ENST00000480179 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
PKNOX1-206ENST00000480179 MT3P25713 68 aa3.92□□□□□ -1.78
PKNOX1-206ENST00000480179 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
PKNOX1-206ENST00000480179 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.8
PKNOX1-206ENST00000480179 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
PKNOX1-206ENST00000480179 KRTAP5-2Q701N4 177 aa3.81□□□□□ -1.8
PKNOX1-206ENST00000480179 KRTAP5-8O75690 187 aa3.75□□□□□ -1.81
PKNOX1-206ENST00000480179 AHNAKQ09666 5890 aaKnown RBP3.72□□□□□ -1.81
PKNOX1-206ENST00000480179 MUC5ACP98088 5654 aa3.71□□□□□ -1.82
PKNOX1-206ENST00000480179 MUC5BQ9HC84 5762 aaPredicted RBP3.68□□□□□ -1.82
PKNOX1-206ENST00000480179 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
PKNOX1-206ENST00000480179 PRM1P04553 51 aa3.47□□□□□ -1.85
PKNOX1-206ENST00000480179 KRTAP5-11Q6L8G4 156 aa3.47□□□□□ -1.85
PKNOX1-206ENST00000480179 KRTAP5-1Q6L8H4 278 aa3.46□□□□□ -1.86
PKNOX1-206ENST00000480179 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
PKNOX1-206ENST00000480179 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
PKNOX1-206ENST00000480179 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
PKNOX1-206ENST00000480179 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
PKNOX1-206ENST00000480179 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
PKNOX1-206ENST00000480179 KRTAP21-2Q3LI59 83 aa2.82□□□□□ -1.96
PKNOX1-206ENST00000480179 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
PKNOX1-206ENST00000480179 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
PKNOX1-206ENST00000480179 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
PKNOX1-206ENST00000480179 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 10.5 ms