RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 H0Y9P7 68 aa3.87□□□□□ -1.79
USP11-208ENST00000480104 ATP5EP56381 51 aaPredicted RBP3.87□□□□□ -1.79
USP11-208ENST00000480104 A0A0D9SG42 100 aa3.86□□□□□ -1.79
USP11-208ENST00000480104 LINC00208Q96KT6 92 aa3.85□□□□□ -1.79
USP11-208ENST00000480104 LOC101927531A0A1B0GV80 90 aa3.82□□□□□ -1.8
USP11-208ENST00000480104 RPS28P62857 69 aaKnown RBP3.82□□□□□ -1.8
USP11-208ENST00000480104 SPANXA2-OT1Q8N9U9 137 aa3.81□□□□□ -1.8
USP11-208ENST00000480104 CAMK2N1Q7Z7J9 78 aa3.79□□□□□ -1.8
USP11-208ENST00000480104 SERP1Q9Y6X1 66 aa3.78□□□□□ -1.8
USP11-208ENST00000480104 SMIM26A0A096LP01 95 aa3.7□□□□□ -1.82
USP11-208ENST00000480104 ACYP2P14621 99 aa3.68□□□□□ -1.82
USP11-208ENST00000480104 DMAC1Q96GE9 116 aa3.67□□□□□ -1.82
USP11-208ENST00000480104 C10orf95Q9H7T3 257 aa3.67□□□□□ -1.82
USP11-208ENST00000480104 KRTAP5-1Q6L8H4 278 aa3.65□□□□□ -1.83
USP11-208ENST00000480104 COA5Q86WW8 74 aa3.65□□□□□ -1.83
USP11-208ENST00000480104 V9GYY9 64 aa3.64□□□□□ -1.83
USP11-208ENST00000480104 CHKB-CPT1BH3BT56 60 aa3.61□□□□□ -1.83
USP11-208ENST00000480104 Q1T7F1 81 aa3.61□□□□□ -1.83
USP11-208ENST00000480104 LCE3AQ5TA76 89 aa3.6□□□□□ -1.83
USP11-208ENST00000480104 KRTAP9-4Q9BYQ2 154 aa3.59□□□□□ -1.83
USP11-208ENST00000480104 SPTSSBQ8NFR3 76 aa3.57□□□□□ -1.84
USP11-208ENST00000480104 LINC01558Q9Y6Z2 57 aa3.55□□□□□ -1.84
USP11-208ENST00000480104 KRTAP6-2Q3LI66 62 aa3.53□□□□□ -1.84
USP11-208ENST00000480104 KRTAP6-1Q3LI64 71 aa3.52□□□□□ -1.85
USP11-208ENST00000480104 SVIPQ8NHG7 77 aa3.51□□□□□ -1.85
USP11-208ENST00000480104 PSPHP1O15172 72 aa3.5□□□□□ -1.85
USP11-208ENST00000480104 KRTAP13-4Q3LI77 160 aa3.5□□□□□ -1.85
USP11-208ENST00000480104 PRR15LQ9BU68 103 aa3.5□□□□□ -1.85
USP11-208ENST00000480104 A0A1B0GU69 56 aa3.47□□□□□ -1.85
USP11-208ENST00000480104 SEC61GP60059 68 aa3.47□□□□□ -1.85
USP11-208ENST00000480104 MT1AP04731 61 aa3.45□□□□□ -1.86
USP11-208ENST00000480104 A6NED7 52 aa3.41□□□□□ -1.86
USP11-208ENST00000480104 BRK1Q8WUW1 75 aa3.41□□□□□ -1.86
USP11-208ENST00000480104 UQCR11O14957 56 aa3.4□□□□□ -1.87
USP11-208ENST00000480104 KRTAP12-3P60328 96 aa3.4□□□□□ -1.87
USP11-208ENST00000480104 PRO0628Q9UI54 55 aa3.39□□□□□ -1.87
USP11-208ENST00000480104 CDC42SE1Q9NRR8 79 aa3.38□□□□□ -1.87
USP11-208ENST00000480104 A0A1B0GU33 70 aa3.35□□□□□ -1.87
USP11-208ENST00000480104 MIR22HGQ0VDD5 57 aa3.35□□□□□ -1.87
USP11-208ENST00000480104 SPATA8Q6RVD6 105 aa3.35□□□□□ -1.87
USP11-208ENST00000480104 A8MU10 97 aa3.27□□□□□ -1.89
USP11-208ENST00000480104 SPINT4Q6UDR6 99 aa3.27□□□□□ -1.89
USP11-208ENST00000480104 PMAIP1Q13794 54 aa3.24□□□□□ -1.89
USP11-208ENST00000480104 K7ERS5 55 aa3.23□□□□□ -1.89
USP11-208ENST00000480104 TNP1P09430 55 aa3.22□□□□□ -1.89
USP11-208ENST00000480104 MT3P25713 68 aa3.18□□□□□ -1.9
USP11-208ENST00000480104 KRTAP12-1P59990 96 aa3.16□□□□□ -1.9
USP11-208ENST00000480104 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
USP11-208ENST00000480104 KRTAP4-2Q9BYR5 136 aa3.14□□□□□ -1.91
USP11-208ENST00000480104 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
USP11-208ENST00000480104 KTN1-AS1Q86SY8 53 aa3.13□□□□□ -1.91
USP11-208ENST00000480104 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
USP11-208ENST00000480104 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
USP11-208ENST00000480104 ROMO1P60602 79 aa3.06□□□□□ -1.92
USP11-208ENST00000480104 KRTAP25-1Q3LHN0 102 aa3.04□□□□□ -1.92
USP11-208ENST00000480104 KRTAP19-4Q3LI73 84 aa3.04□□□□□ -1.92
USP11-208ENST00000480104 LCE3CQ5T5A8 94 aa3.03□□□□□ -1.92
USP11-208ENST00000480104 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
USP11-208ENST00000480104 PRAC1Q96KF2 57 aa2.98□□□□□ -1.93
USP11-208ENST00000480104 KRTAP9-6A8MVA2 160 aa2.94□□□□□ -1.94
USP11-208ENST00000480104 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
USP11-208ENST00000480104 KRTAP15-1Q3LI76 137 aa2.87□□□□□ -1.95
USP11-208ENST00000480104 KRTAP23-1A1A580 65 aa2.85□□□□□ -1.95
USP11-208ENST00000480104 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
USP11-208ENST00000480104 H3BS24 57 aa2.55□□□□□ -2
USP11-208ENST00000480104 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
USP11-208ENST00000480104 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
USP11-208ENST00000480104 LUZP6Q538Z0 58 aa2.5□□□□□ -2.01
USP11-208ENST00000480104 NDUFAF8A1L188 74 aa2.42□□□□□ -2.02
USP11-208ENST00000480104 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
USP11-208ENST00000480104 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
USP11-208ENST00000480104 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
USP11-208ENST00000480104 A0A0A0MQY5 61 aa2.25□□□□□ -2.05
USP11-208ENST00000480104 INE1O15225 51 aa2.06□□□□□ -2.08
USP11-208ENST00000480104 LCE3DQ9BYE3 92 aa2□□□□□ -2.09
USP11-208ENST00000480104 LCE3EQ5T5B0 92 aa1.82□□□□□ -2.12
USP11-208ENST00000480104 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
USP11-208ENST00000480104 PRM1P04553 51 aa1.58□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 39.3 ms