RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 HMCN1Q96RW7 5635 aa1.53□□□□□ -2.16
PBRM1-220ENST00000480064 SPRR2GQ9BYE4 73 aa1.51□□□□□ -2.17
PBRM1-220ENST00000480064 DNAH7Q8WXX0 4024 aa1.5□□□□□ -2.17
PBRM1-220ENST00000480064 FSIP2Q5CZC0 6907 aa1.5□□□□□ -2.17
PBRM1-220ENST00000480064 SMR3BP02814 79 aaPredicted RBP1.5□□□□□ -2.17
PBRM1-220ENST00000480064 SACSQ9NZJ4 4579 aa1.49□□□□□ -2.17
PBRM1-220ENST00000480064 HECTD4Q9Y4D8 3996 aa1.49□□□□□ -2.17
PBRM1-220ENST00000480064 FAT4Q6V0I7 4981 aa1.48□□□□□ -2.17
PBRM1-220ENST00000480064 PKD1P98161 4303 aa1.48□□□□□ -2.17
PBRM1-220ENST00000480064 APOBP04114 4563 aaKnown RBP1.46□□□□□ -2.18
PBRM1-220ENST00000480064 KMT2AQ03164 3969 aa1.46□□□□□ -2.18
PBRM1-220ENST00000480064 HSPG2P98160 4391 aa1.44□□□□□ -2.18
PBRM1-220ENST00000480064 LRP1Q07954 4544 aaKnown RBP1.44□□□□□ -2.18
PBRM1-220ENST00000480064 RNF213Q63HN8 5207 aa1.43□□□□□ -2.18
PBRM1-220ENST00000480064 KRTAP19-3Q7Z4W3 81 aa1.42□□□□□ -2.18
PBRM1-220ENST00000480064 GPR98Q8WXG9 6306 aa1.41□□□□□ -2.18
PBRM1-220ENST00000480064 PKHD1L1Q86WI1 4243 aa1.41□□□□□ -2.18
PBRM1-220ENST00000480064 FLGP20930 4061 aaPredicted RBP1.41□□□□□ -2.18
PBRM1-220ENST00000480064 VPS13BQ7Z7G8 4022 aa1.39□□□□□ -2.19
PBRM1-220ENST00000480064 STARD9Q9P2P6 4700 aa1.38□□□□□ -2.19
PBRM1-220ENST00000480064 DNAH5Q8TE73 4624 aa1.38□□□□□ -2.19
PBRM1-220ENST00000480064 KRTAP19-5Q3LI72 72 aa1.38□□□□□ -2.19
PBRM1-220ENST00000480064 FAT3Q8TDW7 4589 aa1.38□□□□□ -2.19
PBRM1-220ENST00000480064 PKHD1P08F94 4074 aa1.38□□□□□ -2.19
PBRM1-220ENST00000480064 FAT2Q9NYQ8 4349 aa1.37□□□□□ -2.19
PBRM1-220ENST00000480064 KRTAP19-8Q3LI54 63 aa1.37□□□□□ -2.19
PBRM1-220ENST00000480064 DYNC1H1Q14204 4646 aaKnown RBP1.36□□□□□ -2.19
PBRM1-220ENST00000480064 MT1AP04731 61 aa1.36□□□□□ -2.19
PBRM1-220ENST00000480064 LRP1BQ9NZR2 4599 aa1.35□□□□□ -2.19
PBRM1-220ENST00000480064 KRTAP19-2Q3LHN2 52 aa1.34□□□□□ -2.19
PBRM1-220ENST00000480064 TNXBP22105 4242 aa1.34□□□□□ -2.2
PBRM1-220ENST00000480064 MT1HL1P0DM35 61 aa1.33□□□□□ -2.2
PBRM1-220ENST00000480064 NEBP20929 6669 aa1.33□□□□□ -2.2
PBRM1-220ENST00000480064 PLECQ15149 4684 aaKnown RBP1.32□□□□□ -2.2
PBRM1-220ENST00000480064 MT1EP04732 61 aa1.32□□□□□ -2.2
PBRM1-220ENST00000480064 SYNE2Q8WXH0 6885 aaKnown RBP1.3□□□□□ -2.2
PBRM1-220ENST00000480064 MT1XP80297 61 aa1.3□□□□□ -2.2
PBRM1-220ENST00000480064 HMCN2Q8NDA2 5059 aa1.3□□□□□ -2.2
PBRM1-220ENST00000480064 PRM1P04553 51 aa1.29□□□□□ -2.2
PBRM1-220ENST00000480064 MT1LQ93083 61 aa1.29□□□□□ -2.2
PBRM1-220ENST00000480064 SSPOA2VEC9 5147 aa1.28□□□□□ -2.2
PBRM1-220ENST00000480064 LPAP08519 4548 aa1.26□□□□□ -2.21
PBRM1-220ENST00000480064 MACF1Q9UPN3 7388 aaKnown RBP1.25□□□□□ -2.21
PBRM1-220ENST00000480064 FAT1Q14517 4588 aa1.24□□□□□ -2.21
PBRM1-220ENST00000480064 LRP2P98164 4655 aa1.23□□□□□ -2.21
PBRM1-220ENST00000480064 MT1BP07438 61 aa1.21□□□□□ -2.22
PBRM1-220ENST00000480064 SPRR2AP35326 72 aa1.21□□□□□ -2.22
PBRM1-220ENST00000480064 MUC17Q685J3 4493 aa1.2□□□□□ -2.22
PBRM1-220ENST00000480064 SPRR2BP35325 72 aa1.19□□□□□ -2.22
PBRM1-220ENST00000480064 MT1HP80294 61 aa1.18□□□□□ -2.22
PBRM1-220ENST00000480064 KRTAP20-1Q3LI63 56 aa1.18□□□□□ -2.22
PBRM1-220ENST00000480064 SPRR2FQ96RM1 72 aa1.18□□□□□ -2.22
PBRM1-220ENST00000480064 KMT2DO14686 5537 aa1.16□□□□□ -2.22
PBRM1-220ENST00000480064 AHNAK2Q8IVF2 5795 aa1.16□□□□□ -2.22
PBRM1-220ENST00000480064 MT2AP02795 61 aa1.15□□□□□ -2.23
PBRM1-220ENST00000480064 SPRR2DP22532 72 aa1.14□□□□□ -2.23
PBRM1-220ENST00000480064 KRTAP19-7Q3SYF9 63 aa1.14□□□□□ -2.23
PBRM1-220ENST00000480064 MUC12Q9UKN1 5478 aa1.13□□□□□ -2.23
PBRM1-220ENST00000480064 KRTAP6-2Q3LI66 62 aa1.13□□□□□ -2.23
PBRM1-220ENST00000480064 MT1FP04733 61 aa1.12□□□□□ -2.23
PBRM1-220ENST00000480064 USH2AO75445 5202 aa1.12□□□□□ -2.23
PBRM1-220ENST00000480064 MT1GP13640 62 aa1.11□□□□□ -2.23
PBRM1-220ENST00000480064 SPRR2EP22531 72 aa1.11□□□□□ -2.23
PBRM1-220ENST00000480064 AHNAKQ09666 5890 aaKnown RBP1.1□□□□□ -2.23
PBRM1-220ENST00000480064 DSTQ03001 7570 aaKnown RBP1.07□□□□□ -2.24
PBRM1-220ENST00000480064 MT1MQ8N339 61 aa1.06□□□□□ -2.24
PBRM1-220ENST00000480064 KRTAP5-10Q6L8G5 202 aa1.05□□□□□ -2.24
PBRM1-220ENST00000480064 SYNE1Q8NF91 8797 aaKnown RBP1.04□□□□□ -2.24
PBRM1-220ENST00000480064 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.25
PBRM1-220ENST00000480064 MUC5BQ9HC84 5762 aaPredicted RBP1.01□□□□□ -2.25
PBRM1-220ENST00000480064 MDN1Q9NU22 5596 aa0.97□□□□□ -2.25
PBRM1-220ENST00000480064 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
PBRM1-220ENST00000480064 KRTAP6-1Q3LI64 71 aa0.94□□□□□ -2.26
PBRM1-220ENST00000480064 MUC5ACP98088 5654 aa0.92□□□□□ -2.26
PBRM1-220ENST00000480064 KRTAP19-6Q3LI70 58 aa0.81□□□□□ -2.28
PBRM1-220ENST00000480064 PHGR1C9JFL3 82 aa0.65□□□□□ -2.31
PBRM1-220ENST00000480064 MT4P47944 62 aa0.63□□□□□ -2.31
PBRM1-220ENST00000480064 KRTAP20-2Q3LI61 65 aa0.52□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 66.4 ms