RNA–Protein interactions for RNA: ENST00000480004.1

CAPN9-204, Transcript of calpain 9, humanhuman

TSL 2

Gene CAPN9, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-204ENST00000480004 KRTAP4-3Q9BYR4 195 aa1.75□□□□□ -2.13
CAPN9-204ENST00000480004 A0A0D9SG42 100 aa1.73□□□□□ -2.13
CAPN9-204ENST00000480004 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
CAPN9-204ENST00000480004 UBL5Q9BZL1 73 aa1.73□□□□□ -2.13
CAPN9-204ENST00000480004 TSTD3H0UI37 97 aa1.72□□□□□ -2.13
CAPN9-204ENST00000480004 ATOX1O00244 68 aa1.71□□□□□ -2.14
CAPN9-204ENST00000480004 LCE1CQ5T751 118 aa1.7□□□□□ -2.14
CAPN9-204ENST00000480004 LCE1BQ5T7P3 118 aa1.7□□□□□ -2.14
CAPN9-204ENST00000480004 H3BT86 120 aa1.69□□□□□ -2.14
CAPN9-204ENST00000480004 MUC5BQ9HC84 5762 aaPredicted RBP1.68□□□□□ -2.14
CAPN9-204ENST00000480004 OBSCNQ5VST9 7968 aa1.67□□□□□ -2.14
CAPN9-204ENST00000480004 H3BPC8 53 aa1.67□□□□□ -2.14
CAPN9-204ENST00000480004 UQCRQO14949 82 aa1.67□□□□□ -2.14
CAPN9-204ENST00000480004 SPCS1Q9Y6A9 102 aa1.67□□□□□ -2.14
CAPN9-204ENST00000480004 SYNE1Q8NF91 8797 aaKnown RBP1.66□□□□□ -2.14
CAPN9-204ENST00000480004 H0Y9P7 68 aa1.66□□□□□ -2.14
CAPN9-204ENST00000480004 UQCR10Q9UDW1 63 aa1.66□□□□□ -2.14
CAPN9-204ENST00000480004 M0R143 59 aa1.63□□□□□ -2.15
CAPN9-204ENST00000480004 KRTAP5-2Q701N4 177 aa1.63□□□□□ -2.15
CAPN9-204ENST00000480004 SPTSSBQ8NFR3 76 aa1.63□□□□□ -2.15
CAPN9-204ENST00000480004 TAX1BP3O14907 124 aa1.62□□□□□ -2.15
CAPN9-204ENST00000480004 C10orf95Q9H7T3 257 aa1.62□□□□□ -2.15
CAPN9-204ENST00000480004 DMAC1Q96GE9 116 aa1.61□□□□□ -2.15
CAPN9-204ENST00000480004 LINC00208Q96KT6 92 aa1.61□□□□□ -2.15
CAPN9-204ENST00000480004 TRAV7A0A075B6U4 112 aa1.6□□□□□ -2.15
CAPN9-204ENST00000480004 KRTAP12-3P60328 96 aa1.59□□□□□ -2.15
CAPN9-204ENST00000480004 PYY3Q5JQD4 70 aa1.57□□□□□ -2.16
CAPN9-204ENST00000480004 PMAIP1Q13794 54 aa1.56□□□□□ -2.16
CAPN9-204ENST00000480004 ACYP2P14621 99 aa1.55□□□□□ -2.16
CAPN9-204ENST00000480004 KRTAP13-4Q3LI77 160 aa1.55□□□□□ -2.16
CAPN9-204ENST00000480004 LOC105371267A0A1B0GV96 52 aa1.54□□□□□ -2.16
CAPN9-204ENST00000480004 TNP1P09430 55 aa1.54□□□□□ -2.16
CAPN9-204ENST00000480004 SMIM6P0DI80 62 aa1.53□□□□□ -2.16
CAPN9-204ENST00000480004 HIST1H4AP62805 103 aaKnown RBP1.53□□□□□ -2.16
CAPN9-204ENST00000480004 CHKB-CPT1BH3BT56 60 aa1.52□□□□□ -2.17
CAPN9-204ENST00000480004 KRTAP12-1P59990 96 aa1.52□□□□□ -2.17
CAPN9-204ENST00000480004 MT1AP04731 61 aa1.51□□□□□ -2.17
CAPN9-204ENST00000480004 KRTAP6-2Q3LI66 62 aa1.5□□□□□ -2.17
CAPN9-204ENST00000480004 ATP5EP2Q5VTU8 51 aa1.5□□□□□ -2.17
CAPN9-204ENST00000480004 TMEM258P61165 79 aa1.49□□□□□ -2.17
CAPN9-204ENST00000480004 KRTAP6-1Q3LI64 71 aa1.49□□□□□ -2.17
CAPN9-204ENST00000480004 SCGB1A1P11684 91 aa1.48□□□□□ -2.17
CAPN9-204ENST00000480004 KTN1-AS1Q86SY8 53 aa1.46□□□□□ -2.18
CAPN9-204ENST00000480004 SERP1Q9Y6X1 66 aa1.44□□□□□ -2.18
CAPN9-204ENST00000480004 SPATA8Q6RVD6 105 aa1.43□□□□□ -2.18
CAPN9-204ENST00000480004 COA5Q86WW8 74 aa1.42□□□□□ -2.18
CAPN9-204ENST00000480004 COL5A1-AS1Q5SY13 56 aa1.41□□□□□ -2.18
CAPN9-204ENST00000480004 ETDBQ3ZM63 59 aa1.4□□□□□ -2.19
CAPN9-204ENST00000480004 A0A1B0GV90 55 aa1.39□□□□□ -2.19
CAPN9-204ENST00000480004 F8W1H4 67 aa1.39□□□□□ -2.19
CAPN9-204ENST00000480004 Q1T7F1 81 aa1.39□□□□□ -2.19
CAPN9-204ENST00000480004 K7ERU9 68 aa1.37□□□□□ -2.19
CAPN9-204ENST00000480004 LINC00643Q86TS7 51 aa1.37□□□□□ -2.19
CAPN9-204ENST00000480004 GTF2H5Q6ZYL4 71 aa1.36□□□□□ -2.19
CAPN9-204ENST00000480004 J3QR89 54 aa1.35□□□□□ -2.19
CAPN9-204ENST00000480004 MUC19Q7Z5P9 8384 aa1.31□□□□□ -2.2
CAPN9-204ENST00000480004 SERP2Q8N6R1 65 aa1.3□□□□□ -2.2
CAPN9-204ENST00000480004 PHGR1C9JFL3 82 aa1.27□□□□□ -2.21
CAPN9-204ENST00000480004 SMIM20Q8N5G0 67 aa1.27□□□□□ -2.21
CAPN9-204ENST00000480004 A0A1B0GU69 56 aa1.24□□□□□ -2.21
CAPN9-204ENST00000480004 H7BZZ5 65 aa1.24□□□□□ -2.21
CAPN9-204ENST00000480004 SNURFQ9Y675 71 aa1.23□□□□□ -2.21
CAPN9-204ENST00000480004 COX7CP15954 63 aa1.2□□□□□ -2.22
CAPN9-204ENST00000480004 PRR15LQ9BU68 103 aa1.2□□□□□ -2.22
CAPN9-204ENST00000480004 CCDC179H3BU77 68 aa1.19□□□□□ -2.22
CAPN9-204ENST00000480004 ATP5EP56381 51 aaPredicted RBP1.19□□□□□ -2.22
CAPN9-204ENST00000480004 RPS28P62857 69 aaKnown RBP1.19□□□□□ -2.22
CAPN9-204ENST00000480004 KRTAP21-2Q3LI59 83 aa1.19□□□□□ -2.22
CAPN9-204ENST00000480004 ROMO1P60602 79 aa1.14□□□□□ -2.23
CAPN9-204ENST00000480004 INE1O15225 51 aa1.12□□□□□ -2.23
CAPN9-204ENST00000480004 CDC42SE1Q9NRR8 79 aa1.08□□□□□ -2.24
CAPN9-204ENST00000480004 UQCR11O14957 56 aa1.07□□□□□ -2.24
CAPN9-204ENST00000480004 BRK1Q8WUW1 75 aa1.06□□□□□ -2.24
CAPN9-204ENST00000480004 LINC01558Q9Y6Z2 57 aa1.04□□□□□ -2.24
CAPN9-204ENST00000480004 MIR22HGQ0VDD5 57 aa1□□□□□ -2.25
CAPN9-204ENST00000480004 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
CAPN9-204ENST00000480004 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
CAPN9-204ENST00000480004 PRM1P04553 51 aa0.45□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 54.5 ms