RNA–Protein interactions for RNA: ENST00000479620.1

GRIK3-204, Transcript of glutamate ionotropic receptor kainate type subunit 3, human

TSL 3

Gene GRIK3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRIK3-204	ENST00000479620	LCE3B	Q5TA77	95 aa		6.17	□□□□□ -1.42
GRIK3-204	ENST00000479620		A6NED7	52 aa		6.12	□□□□□ -1.43
GRIK3-204	ENST00000479620	MT1G	P13640	62 aa		6.12	□□□□□ -1.43
GRIK3-204	ENST00000479620	KRTAP25-1	Q3LHN0	102 aa		6.09	□□□□□ -1.43
GRIK3-204	ENST00000479620	MT1L	Q93083	61 aa		6.06	□□□□□ -1.44
GRIK3-204	ENST00000479620	PP632	Q6XCG6	107 aa		6.04	□□□□□ -1.44
GRIK3-204	ENST00000479620	DST	Q03001	7570 aa	Known RBP	6	□□□□□ -1.45
GRIK3-204	ENST00000479620	KRTAP12-3	P60328	96 aa		5.99	□□□□□ -1.45
GRIK3-204	ENST00000479620	MT1M	Q8N339	61 aa		5.99	□□□□□ -1.45
GRIK3-204	ENST00000479620	CDC42SE1	Q9NRR8	79 aa		5.93	□□□□□ -1.46
GRIK3-204	ENST00000479620	KRTAP23-1	A1A580	65 aa		5.92	□□□□□ -1.46
GRIK3-204	ENST00000479620	ROMO1	P60602	79 aa		5.82	□□□□□ -1.48
GRIK3-204	ENST00000479620	KRTAP4-3	Q9BYR4	195 aa		5.8	□□□□□ -1.48
GRIK3-204	ENST00000479620	BRK1	Q8WUW1	75 aa		5.79	□□□□□ -1.48
GRIK3-204	ENST00000479620	KRTAP19-4	Q3LI73	84 aa		5.75	□□□□□ -1.49
GRIK3-204	ENST00000479620	KRTAP4-7	Q9BYR0	210 aa		5.75	□□□□□ -1.49
GRIK3-204	ENST00000479620	KRTAP15-1	Q3LI76	137 aa		5.67	□□□□□ -1.5
GRIK3-204	ENST00000479620	LCE4A	Q5TA78	99 aa		5.67	□□□□□ -1.5
GRIK3-204	ENST00000479620	KRTAP4-9	Q9BYQ8	210 aa		5.67	□□□□□ -1.5
GRIK3-204	ENST00000479620	KRTAP5-4	Q6L8H1	288 aa		5.62	□□□□□ -1.51
GRIK3-204	ENST00000479620	LCE1D	Q5T752	114 aa		5.58	□□□□□ -1.52
GRIK3-204	ENST00000479620	HMCN1	Q96RW7	5635 aa		5.57	□□□□□ -1.52
GRIK3-204	ENST00000479620	LCE3C	Q5T5A8	94 aa		5.55	□□□□□ -1.52
GRIK3-204	ENST00000479620	MT4	P47944	62 aa		5.52	□□□□□ -1.53
GRIK3-204	ENST00000479620	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.5	□□□□□ -1.53
GRIK3-204	ENST00000479620	PRO0628	Q9UI54	55 aa		5.48	□□□□□ -1.53
GRIK3-204	ENST00000479620	PMAIP1	Q13794	54 aa		5.47	□□□□□ -1.53
GRIK3-204	ENST00000479620	LOC100996750	A0A140TA64	210 aa		5.43	□□□□□ -1.54
GRIK3-204	ENST00000479620	KRTAP4-6	Q9BYQ5	205 aa		5.42	□□□□□ -1.54
GRIK3-204	ENST00000479620	GPR98	Q8WXG9	6306 aa		5.34	□□□□□ -1.55
GRIK3-204	ENST00000479620	SPRR5	A0A1B0GTR4	108 aa		5.29	□□□□□ -1.56
GRIK3-204	ENST00000479620	KRTAP12-4	P60329	112 aa		5.28	□□□□□ -1.56
GRIK3-204	ENST00000479620	SYNE1	Q8NF91	8797 aa	Known RBP	5.26	□□□□□ -1.57
GRIK3-204	ENST00000479620	KRTAP20-2	Q3LI61	65 aa		5.26	□□□□□ -1.57
GRIK3-204	ENST00000479620	AHNAK2	Q8IVF2	5795 aa		5.25	□□□□□ -1.57
GRIK3-204	ENST00000479620	KRTAP9-6	A8MVA2	160 aa		5.22	□□□□□ -1.57
GRIK3-204	ENST00000479620	MT1A	P04731	61 aa		5.17	□□□□□ -1.58
GRIK3-204	ENST00000479620	KTN1-AS1	Q86SY8	53 aa		5.13	□□□□□ -1.59
GRIK3-204	ENST00000479620	PRAC1	Q96KF2	57 aa		5.13	□□□□□ -1.59
GRIK3-204	ENST00000479620	KRTAP5-3	Q6L8H2	238 aa		5.12	□□□□□ -1.59
GRIK3-204	ENST00000479620	KRTAP6-1	Q3LI64	71 aa		5.11	□□□□□ -1.59
GRIK3-204	ENST00000479620	KRTAP5-10	Q6L8G5	202 aa		5.1	□□□□□ -1.59
GRIK3-204	ENST00000479620	KRTAP9-4	Q9BYQ2	154 aa		4.98	□□□□□ -1.61
GRIK3-204	ENST00000479620	KRTAP5-2	Q701N4	177 aa		4.97	□□□□□ -1.61
GRIK3-204	ENST00000479620	KRTAP5-7	Q6L8G8	165 aa		4.88	□□□□□ -1.63
GRIK3-204	ENST00000479620	SVIP	Q8NHG7	77 aa		4.87	□□□□□ -1.63
GRIK3-204	ENST00000479620	KRTAP6-2	Q3LI66	62 aa		4.84	□□□□□ -1.63
GRIK3-204	ENST00000479620	KRTAP4-11	Q9BYQ6	195 aa		4.75	□□□□□ -1.65
GRIK3-204	ENST00000479620	MT3	P25713	68 aa		4.72	□□□□□ -1.65
GRIK3-204	ENST00000479620	KRTAP5-8	O75690	187 aa		4.6	□□□□□ -1.67
GRIK3-204	ENST00000479620	OBSCN	Q5VST9	7968 aa		4.56	□□□□□ -1.68
GRIK3-204	ENST00000479620	KRTAP5-1	Q6L8H4	278 aa		4.4	□□□□□ -1.71
GRIK3-204	ENST00000479620	MUC5AC	P98088	5654 aa		4.36	□□□□□ -1.71
GRIK3-204	ENST00000479620	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.33	□□□□□ -1.72
GRIK3-204	ENST00000479620	LCE1E	Q5T753	118 aa		4.32	□□□□□ -1.72
GRIK3-204	ENST00000479620	KRTAP9-9	Q9BYP9	154 aa		4.3	□□□□□ -1.72
GRIK3-204	ENST00000479620	LUZP6	Q538Z0	58 aa		4.29	□□□□□ -1.72
GRIK3-204	ENST00000479620	AHNAK	Q09666	5890 aa	Known RBP	4.27	□□□□□ -1.73
GRIK3-204	ENST00000479620	LCE3D	Q9BYE3	92 aa		4.04	□□□□□ -1.76
GRIK3-204	ENST00000479620	KRTAP4-2	Q9BYR5	136 aa		4.03	□□□□□ -1.76
GRIK3-204	ENST00000479620	LCE1C	Q5T751	118 aa		4	□□□□□ -1.77
GRIK3-204	ENST00000479620	LCE1B	Q5T7P3	118 aa		4	□□□□□ -1.77
GRIK3-204	ENST00000479620	NDUFAF8	A1L188	74 aa		3.91	□□□□□ -1.78
GRIK3-204	ENST00000479620	LCE3E	Q5T5B0	92 aa		3.83	□□□□□ -1.8
GRIK3-204	ENST00000479620	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.68	□□□□□ -1.82
GRIK3-204	ENST00000479620	KRTAP5-11	Q6L8G4	156 aa		3.6	□□□□□ -1.83
GRIK3-204	ENST00000479620	KRTAP4-12	Q9BQ66	201 aa		3.53	□□□□□ -1.84
GRIK3-204	ENST00000479620	LCE1F	Q5T754	118 aa		3.47	□□□□□ -1.85
GRIK3-204	ENST00000479620	KRTAP21-2	Q3LI59	83 aa		3.39	□□□□□ -1.87
GRIK3-204	ENST00000479620		A0A0A0MQY5	61 aa		3.38	□□□□□ -1.87
GRIK3-204	ENST00000479620	INE1	O15225	51 aa		3.24	□□□□□ -1.89
GRIK3-204	ENST00000479620	PHGR1	C9JFL3	82 aa		3.1	□□□□□ -1.91
GRIK3-204	ENST00000479620	KRTAP4-4	Q9BYR3	166 aa		3.01	□□□□□ -1.93
GRIK3-204	ENST00000479620	PRM1	P04553	51 aa		2.97	□□□□□ -1.93
GRIK3-204	ENST00000479620		H3BS24	57 aa		2.86	□□□□□ -1.95
GRIK3-204	ENST00000479620	MUC19	Q7Z5P9	8384 aa		2.8	□□□□□ -1.96
GRIK3-204	ENST00000479620	KRTAP21-1	Q3LI58	79 aa		2.24	□□□□□ -2.05
GRIK3-204	ENST00000479620	MUC16	Q8WXI7	14507 aa		1.97	□□□□□ -2.09

Retrieved 78 of 20,778 RNA–protein pairs in 53.2 ms