RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 KRTAP19-4Q3LI73 84 aa3.57□□□□□ -1.84
DDX56-211ENST00000479602 KRTAP4-8Q9BYQ9 185 aa3.57□□□□□ -1.84
DDX56-211ENST00000479602 SPRR2DP22532 72 aa3.5□□□□□ -1.85
DDX56-211ENST00000479602 KRTAP25-1Q3LHN0 102 aa3.5□□□□□ -1.85
DDX56-211ENST00000479602 KRTAP10-7P60409 375 aaPredicted RBP3.49□□□□□ -1.85
DDX56-211ENST00000479602 ROMO1P60602 79 aa3.46□□□□□ -1.86
DDX56-211ENST00000479602 GPR98Q8WXG9 6306 aa3.46□□□□□ -1.86
DDX56-211ENST00000479602 LCE3BQ5TA77 95 aa3.45□□□□□ -1.86
DDX56-211ENST00000479602 C10orf95Q9H7T3 257 aa3.45□□□□□ -1.86
DDX56-211ENST00000479602 DSTQ03001 7570 aaKnown RBP3.43□□□□□ -1.86
DDX56-211ENST00000479602 TNP1P09430 55 aa3.43□□□□□ -1.86
DDX56-211ENST00000479602 KRTAP19-7Q3SYF9 63 aa3.34□□□□□ -1.87
DDX56-211ENST00000479602 LCE5AQ5TCM9 118 aa3.33□□□□□ -1.88
DDX56-211ENST00000479602 PP632Q6XCG6 107 aa3.32□□□□□ -1.88
DDX56-211ENST00000479602 MT1EP04732 61 aa3.3□□□□□ -1.88
DDX56-211ENST00000479602 LCE3AQ5TA76 89 aa3.29□□□□□ -1.88
DDX56-211ENST00000479602 KRTAP4-9Q9BYQ8 210 aa3.26□□□□□ -1.89
DDX56-211ENST00000479602 HMCN1Q96RW7 5635 aa3.26□□□□□ -1.89
DDX56-211ENST00000479602 KRTAP19-3Q7Z4W3 81 aa3.25□□□□□ -1.89
DDX56-211ENST00000479602 KRTAP19-5Q3LI72 72 aa3.24□□□□□ -1.89
DDX56-211ENST00000479602 MT1GP13640 62 aa3.2□□□□□ -1.9
DDX56-211ENST00000479602 KRTAP12-3P60328 96 aa3.2□□□□□ -1.9
DDX56-211ENST00000479602 KRTAP15-1Q3LI76 137 aa3.19□□□□□ -1.9
DDX56-211ENST00000479602 LCE1DQ5T752 114 aa3.18□□□□□ -1.9
DDX56-211ENST00000479602 MT1LQ93083 61 aa3.18□□□□□ -1.9
DDX56-211ENST00000479602 AHNAK2Q8IVF2 5795 aa3.18□□□□□ -1.9
DDX56-211ENST00000479602 LCE4AQ5TA78 99 aa3.14□□□□□ -1.91
DDX56-211ENST00000479602 KRTAP5-4Q6L8H1 288 aa3.12□□□□□ -1.91
DDX56-211ENST00000479602 MT1MQ8N339 61 aa3.1□□□□□ -1.91
DDX56-211ENST00000479602 KRTAP5-10Q6L8G5 202 aa3.09□□□□□ -1.91
DDX56-211ENST00000479602 MT4P47944 62 aa3.07□□□□□ -1.92
DDX56-211ENST00000479602 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
DDX56-211ENST00000479602 KRTAP4-6Q9BYQ5 205 aa3.05□□□□□ -1.92
DDX56-211ENST00000479602 KRTAP4-3Q9BYR4 195 aa3.04□□□□□ -1.92
DDX56-211ENST00000479602 KRTAP5-7Q6L8G8 165 aa2.99□□□□□ -1.93
DDX56-211ENST00000479602 LCE3CQ5T5A8 94 aa2.98□□□□□ -1.93
DDX56-211ENST00000479602 KRTAP5-3Q6L8H2 238 aa2.96□□□□□ -1.94
DDX56-211ENST00000479602 KRTAP9-4Q9BYQ2 154 aa2.96□□□□□ -1.94
DDX56-211ENST00000479602 LUZP6Q538Z0 58 aa2.94□□□□□ -1.94
DDX56-211ENST00000479602 KRTAP5-5Q701N2 237 aaPredicted RBP2.93□□□□□ -1.94
DDX56-211ENST00000479602 KRTAP4-7Q9BYR0 210 aa2.92□□□□□ -1.94
DDX56-211ENST00000479602 SYNE1Q8NF91 8797 aaKnown RBP2.91□□□□□ -1.94
DDX56-211ENST00000479602 LOC100996750A0A140TA64 210 aa2.9□□□□□ -1.95
DDX56-211ENST00000479602 KRTAP20-2Q3LI61 65 aa2.9□□□□□ -1.95
DDX56-211ENST00000479602 SPRR5A0A1B0GTR4 108 aa2.89□□□□□ -1.95
DDX56-211ENST00000479602 KRTAP4-12Q9BQ66 201 aa2.89□□□□□ -1.95
DDX56-211ENST00000479602 KRTAP9-9Q9BYP9 154 aa2.85□□□□□ -1.95
DDX56-211ENST00000479602 KRTAP12-4P60329 112 aa2.79□□□□□ -1.96
DDX56-211ENST00000479602 KRTAP9-6A8MVA2 160 aa2.78□□□□□ -1.96
DDX56-211ENST00000479602 MT1AP04731 61 aa2.74□□□□□ -1.97
DDX56-211ENST00000479602 KRTAP5-2Q701N4 177 aa2.71□□□□□ -1.98
DDX56-211ENST00000479602 MUC5BQ9HC84 5762 aaPredicted RBP2.71□□□□□ -1.98
DDX56-211ENST00000479602 MT3P25713 68 aa2.7□□□□□ -1.98
DDX56-211ENST00000479602 KRTAP4-11Q9BYQ6 195 aa2.7□□□□□ -1.98
DDX56-211ENST00000479602 AHNAKQ09666 5890 aaKnown RBP2.7□□□□□ -1.98
DDX56-211ENST00000479602 MUC5ACP98088 5654 aa2.64□□□□□ -1.99
DDX56-211ENST00000479602 KRTAP5-8O75690 187 aa2.64□□□□□ -1.99
DDX56-211ENST00000479602 KRTAP6-1Q3LI64 71 aa2.64□□□□□ -1.99
DDX56-211ENST00000479602 INE1O15225 51 aa2.6□□□□□ -1.99
DDX56-211ENST00000479602 OBSCNQ5VST9 7968 aa2.59□□□□□ -2
DDX56-211ENST00000479602 KRTAP6-2Q3LI66 62 aa2.52□□□□□ -2.01
DDX56-211ENST00000479602 KRTAP5-1Q6L8H4 278 aa2.46□□□□□ -2.02
DDX56-211ENST00000479602 LCE1EQ5T753 118 aa2.32□□□□□ -2.04
DDX56-211ENST00000479602 LCE1FQ5T754 118 aa2.3□□□□□ -2.04
DDX56-211ENST00000479602 KRTAP4-2Q9BYR5 136 aa2.26□□□□□ -2.05
DDX56-211ENST00000479602 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
DDX56-211ENST00000479602 LCE1CQ5T751 118 aa2.13□□□□□ -2.07
DDX56-211ENST00000479602 LCE1BQ5T7P3 118 aa2.13□□□□□ -2.07
DDX56-211ENST00000479602 LCE3EQ5T5B0 92 aa2.12□□□□□ -2.07
DDX56-211ENST00000479602 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
DDX56-211ENST00000479602 KRTAP5-11Q6L8G4 156 aa1.95□□□□□ -2.1
DDX56-211ENST00000479602 PRM1P04553 51 aa1.79□□□□□ -2.12
DDX56-211ENST00000479602 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
DDX56-211ENST00000479602 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
DDX56-211ENST00000479602 MUC19Q7Z5P9 8384 aa1.61□□□□□ -2.15
DDX56-211ENST00000479602 KRTAP4-4Q9BYR3 166 aa1.56□□□□□ -2.16
DDX56-211ENST00000479602 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
DDX56-211ENST00000479602 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 87.6 ms