RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 KMT2DO14686 5537 aa4.81□□□□□ -1.64
CNKSR3-204ENST00000479339 KRTAP2-3P0C7H8 128 aa4.78□□□□□ -1.64
CNKSR3-204ENST00000479339 KRTAP2-4Q9BYR9 128 aa4.78□□□□□ -1.64
CNKSR3-204ENST00000479339 KRTAP2-1Q9BYU5 128 aa4.78□□□□□ -1.64
CNKSR3-204ENST00000479339 SPRR2FQ96RM1 72 aa4.77□□□□□ -1.65
CNKSR3-204ENST00000479339 MDN1Q9NU22 5596 aa4.76□□□□□ -1.65
CNKSR3-204ENST00000479339 SPRR2EP22531 72 aa4.72□□□□□ -1.65
CNKSR3-204ENST00000479339 SPRR2BP35325 72 aa4.72□□□□□ -1.65
CNKSR3-204ENST00000479339 SPRR2AP35326 72 aa4.72□□□□□ -1.65
CNKSR3-204ENST00000479339 KRTAP10-7P60409 375 aaPredicted RBP4.69□□□□□ -1.66
CNKSR3-204ENST00000479339 KRTAP4-8A0A0G2JLE6 195 aa4.68□□□□□ -1.66
CNKSR3-204ENST00000479339 KRTAP4-8Q9BYQ9 185 aa4.68□□□□□ -1.66
CNKSR3-204ENST00000479339 LCE1AQ5T7P2 110 aa4.67□□□□□ -1.66
CNKSR3-204ENST00000479339 KRTAP19-4Q3LI73 84 aa4.63□□□□□ -1.67
CNKSR3-204ENST00000479339 KRTAP19-5Q3LI72 72 aa4.62□□□□□ -1.67
CNKSR3-204ENST00000479339 KRTAP9-6A8MVA2 160 aa4.6□□□□□ -1.67
CNKSR3-204ENST00000479339 SPRR2DP22532 72 aa4.57□□□□□ -1.68
CNKSR3-204ENST00000479339 KRTAP2-2Q9BYT5 123 aa4.55□□□□□ -1.68
CNKSR3-204ENST00000479339 LCE3BQ5TA77 95 aa4.45□□□□□ -1.7
CNKSR3-204ENST00000479339 LOC100996750A0A140TA64 210 aa4.43□□□□□ -1.7
CNKSR3-204ENST00000479339 KRTAP4-6Q9BYQ5 205 aa4.43□□□□□ -1.7
CNKSR3-204ENST00000479339 KRTAP19-7Q3SYF9 63 aa4.39□□□□□ -1.71
CNKSR3-204ENST00000479339 MT1EP04732 61 aa4.36□□□□□ -1.71
CNKSR3-204ENST00000479339 LCE5AQ5TCM9 118 aa4.34□□□□□ -1.71
CNKSR3-204ENST00000479339 KRTAP19-3Q7Z4W3 81 aa4.33□□□□□ -1.72
CNKSR3-204ENST00000479339 KRTAP12-4P60329 112 aa4.29□□□□□ -1.72
CNKSR3-204ENST00000479339 KRTAP4-12Q9BQ66 201 aa4.29□□□□□ -1.72
CNKSR3-204ENST00000479339 KRTAP4-7Q9BYR0 210 aa4.27□□□□□ -1.73
CNKSR3-204ENST00000479339 LCE4AQ5TA78 99 aa4.23□□□□□ -1.73
CNKSR3-204ENST00000479339 MT1LQ93083 61 aa4.23□□□□□ -1.73
CNKSR3-204ENST00000479339 MT1GP13640 62 aa4.22□□□□□ -1.73
CNKSR3-204ENST00000479339 KRTAP9-4Q9BYQ2 154 aa4.16□□□□□ -1.74
CNKSR3-204ENST00000479339 MT1MQ8N339 61 aa4.15□□□□□ -1.75
CNKSR3-204ENST00000479339 DSTQ03001 7570 aaKnown RBP4.12□□□□□ -1.75
CNKSR3-204ENST00000479339 KRTAP4-9Q9BYQ8 210 aa4.12□□□□□ -1.75
CNKSR3-204ENST00000479339 KRTAP9-9Q9BYP9 154 aa4.11□□□□□ -1.75
CNKSR3-204ENST00000479339 LCE1DQ5T752 114 aa4.04□□□□□ -1.76
CNKSR3-204ENST00000479339 KRTAP4-3Q9BYR4 195 aa4.04□□□□□ -1.76
CNKSR3-204ENST00000479339 GPR98Q8WXG9 6306 aa4.02□□□□□ -1.77
CNKSR3-204ENST00000479339 KRTAP5-4Q6L8H1 288 aa3.99□□□□□ -1.77
CNKSR3-204ENST00000479339 MT4P47944 62 aa3.98□□□□□ -1.77
CNKSR3-204ENST00000479339 MT1AP04731 61 aa3.94□□□□□ -1.78
CNKSR3-204ENST00000479339 HMCN1Q96RW7 5635 aa3.92□□□□□ -1.78
CNKSR3-204ENST00000479339 PRM1P04553 51 aa3.87□□□□□ -1.79
CNKSR3-204ENST00000479339 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
CNKSR3-204ENST00000479339 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
CNKSR3-204ENST00000479339 AHNAK2Q8IVF2 5795 aa3.83□□□□□ -1.8
CNKSR3-204ENST00000479339 KRTAP5-5Q701N2 237 aaPredicted RBP3.82□□□□□ -1.8
CNKSR3-204ENST00000479339 LCE3DQ9BYE3 92 aa3.8□□□□□ -1.8
CNKSR3-204ENST00000479339 KRTAP5-10Q6L8G5 202 aa3.78□□□□□ -1.8
CNKSR3-204ENST00000479339 KRTAP20-2Q3LI61 65 aa3.75□□□□□ -1.81
CNKSR3-204ENST00000479339 MT3P25713 68 aa3.71□□□□□ -1.82
CNKSR3-204ENST00000479339 KRTAP5-3Q6L8H2 238 aa3.68□□□□□ -1.82
CNKSR3-204ENST00000479339 KRTAP5-7Q6L8G8 165 aa3.65□□□□□ -1.82
CNKSR3-204ENST00000479339 KRTAP4-11Q9BYQ6 195 aa3.6□□□□□ -1.83
CNKSR3-204ENST00000479339 KRTAP6-2Q3LI66 62 aa3.57□□□□□ -1.84
CNKSR3-204ENST00000479339 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
CNKSR3-204ENST00000479339 SYNE1Q8NF91 8797 aaKnown RBP3.55□□□□□ -1.84
CNKSR3-204ENST00000479339 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
CNKSR3-204ENST00000479339 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
CNKSR3-204ENST00000479339 LCE1EQ5T753 118 aa3.39□□□□□ -1.87
CNKSR3-204ENST00000479339 KRTAP5-8O75690 187 aa3.31□□□□□ -1.88
CNKSR3-204ENST00000479339 AHNAKQ09666 5890 aaKnown RBP3.15□□□□□ -1.91
CNKSR3-204ENST00000479339 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
CNKSR3-204ENST00000479339 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
CNKSR3-204ENST00000479339 MUC5ACP98088 5654 aa3.11□□□□□ -1.91
CNKSR3-204ENST00000479339 OBSCNQ5VST9 7968 aa3.05□□□□□ -1.92
CNKSR3-204ENST00000479339 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
CNKSR3-204ENST00000479339 LCE1CQ5T751 118 aa2.78□□□□□ -1.96
CNKSR3-204ENST00000479339 KRTAP21-1Q3LI58 79 aa2.56□□□□□ -2
CNKSR3-204ENST00000479339 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
CNKSR3-204ENST00000479339 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
CNKSR3-204ENST00000479339 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
CNKSR3-204ENST00000479339 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
CNKSR3-204ENST00000479339 KRTAP4-4Q9BYR3 166 aa2.1□□□□□ -2.07
CNKSR3-204ENST00000479339 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
CNKSR3-204ENST00000479339 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 169.8 ms