RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 USH2AO75445 5202 aa3.87□□□□□ -1.79
RAD51B-208ENST00000479335 KRTAP10-7P60409 375 aaPredicted RBP3.87□□□□□ -1.79
RAD51B-208ENST00000479335 KRTAP8-1Q8IUC2 63 aa3.87□□□□□ -1.79
RAD51B-208ENST00000479335 KRTAP19-6Q3LI70 58 aa3.84□□□□□ -1.8
RAD51B-208ENST00000479335 LUZP6Q538Z0 58 aa3.82□□□□□ -1.8
RAD51B-208ENST00000479335 SSPOA2VEC9 5147 aa3.77□□□□□ -1.81
RAD51B-208ENST00000479335 KRTAP12-3P60328 96 aa3.76□□□□□ -1.81
RAD51B-208ENST00000479335 LCE1AQ5T7P2 110 aa3.76□□□□□ -1.81
RAD51B-208ENST00000479335 NDUFAF8A1L188 74 aa3.7□□□□□ -1.82
RAD51B-208ENST00000479335 SPRR5A0A1B0GTR4 108 aa3.67□□□□□ -1.82
RAD51B-208ENST00000479335 KRTAP19-5Q3LI72 72 aa3.67□□□□□ -1.82
RAD51B-208ENST00000479335 FCGBPQ9Y6R7 5405 aaPredicted RBP3.65□□□□□ -1.83
RAD51B-208ENST00000479335 KRTAP19-7Q3SYF9 63 aa3.61□□□□□ -1.83
RAD51B-208ENST00000479335 MACF1Q9UPN3 7388 aaKnown RBP3.59□□□□□ -1.83
RAD51B-208ENST00000479335 SYNE2Q8WXH0 6885 aaKnown RBP3.58□□□□□ -1.84
RAD51B-208ENST00000479335 MT3P25713 68 aa3.55□□□□□ -1.84
RAD51B-208ENST00000479335 MT1EP04732 61 aa3.54□□□□□ -1.84
RAD51B-208ENST00000479335 KMT2DO14686 5537 aa3.54□□□□□ -1.84
RAD51B-208ENST00000479335 LCE3CQ5T5A8 94 aa3.52□□□□□ -1.85
RAD51B-208ENST00000479335 MT1LQ93083 61 aa3.49□□□□□ -1.85
RAD51B-208ENST00000479335 KRTAP6-3Q3LI67 103 aa3.44□□□□□ -1.86
RAD51B-208ENST00000479335 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
RAD51B-208ENST00000479335 MT1GP13640 62 aa3.41□□□□□ -1.86
RAD51B-208ENST00000479335 KRTAP19-3Q7Z4W3 81 aa3.4□□□□□ -1.87
RAD51B-208ENST00000479335 SPRR2FQ96RM1 72 aa3.37□□□□□ -1.87
RAD51B-208ENST00000479335 KRTAP5-9P26371 169 aa3.35□□□□□ -1.87
RAD51B-208ENST00000479335 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
RAD51B-208ENST00000479335 MT1MQ8N339 61 aa3.33□□□□□ -1.88
RAD51B-208ENST00000479335 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
RAD51B-208ENST00000479335 NEBP20929 6669 aa3.27□□□□□ -1.89
RAD51B-208ENST00000479335 MUC12Q9UKN1 5478 aa3.26□□□□□ -1.89
RAD51B-208ENST00000479335 KRTAP4-3Q9BYR4 195 aa3.22□□□□□ -1.89
RAD51B-208ENST00000479335 SPRR2EP22531 72 aa3.2□□□□□ -1.9
RAD51B-208ENST00000479335 SPRR2BP35325 72 aa3.2□□□□□ -1.9
RAD51B-208ENST00000479335 SPRR2AP35326 72 aa3.2□□□□□ -1.9
RAD51B-208ENST00000479335 MDN1Q9NU22 5596 aa3.19□□□□□ -1.9
RAD51B-208ENST00000479335 INE1O15225 51 aa3.15□□□□□ -1.9
RAD51B-208ENST00000479335 KRTAP2-3P0C7H8 128 aa3.15□□□□□ -1.91
RAD51B-208ENST00000479335 KRTAP2-4Q9BYR9 128 aa3.15□□□□□ -1.91
RAD51B-208ENST00000479335 KRTAP2-1Q9BYU5 128 aa3.15□□□□□ -1.91
RAD51B-208ENST00000479335 KRTAP20-1Q3LI63 56 aa3.14□□□□□ -1.91
RAD51B-208ENST00000479335 SPRR2DP22532 72 aa3.1□□□□□ -1.91
RAD51B-208ENST00000479335 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
RAD51B-208ENST00000479335 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
RAD51B-208ENST00000479335 KRTAP5-5Q701N2 237 aaPredicted RBP3□□□□□ -1.93
RAD51B-208ENST00000479335 DSTQ03001 7570 aaKnown RBP2.99□□□□□ -1.93
RAD51B-208ENST00000479335 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
RAD51B-208ENST00000479335 MT1AP04731 61 aa2.98□□□□□ -1.93
RAD51B-208ENST00000479335 KRTAP6-1Q3LI64 71 aa2.92□□□□□ -1.94
RAD51B-208ENST00000479335 KRTAP5-4Q6L8H1 288 aa2.83□□□□□ -1.96
RAD51B-208ENST00000479335 SYNE1Q8NF91 8797 aaKnown RBP2.82□□□□□ -1.96
RAD51B-208ENST00000479335 GPR98Q8WXG9 6306 aa2.81□□□□□ -1.96
RAD51B-208ENST00000479335 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
RAD51B-208ENST00000479335 KRTAP12-4P60329 112 aa2.78□□□□□ -1.96
RAD51B-208ENST00000479335 MT4P47944 62 aa2.71□□□□□ -1.98
RAD51B-208ENST00000479335 KRTAP6-2Q3LI66 62 aa2.68□□□□□ -1.98
RAD51B-208ENST00000479335 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
RAD51B-208ENST00000479335 KRTAP20-2Q3LI61 65 aa2.62□□□□□ -1.99
RAD51B-208ENST00000479335 KRTAP5-1Q6L8H4 278 aa2.62□□□□□ -1.99
RAD51B-208ENST00000479335 HMCN1Q96RW7 5635 aa2.62□□□□□ -1.99
RAD51B-208ENST00000479335 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
RAD51B-208ENST00000479335 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
RAD51B-208ENST00000479335 KRTAP5-10Q6L8G5 202 aa2.43□□□□□ -2.02
RAD51B-208ENST00000479335 AHNAK2Q8IVF2 5795 aa2.41□□□□□ -2.02
RAD51B-208ENST00000479335 OBSCNQ5VST9 7968 aa2.38□□□□□ -2.03
RAD51B-208ENST00000479335 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
RAD51B-208ENST00000479335 PRM1P04553 51 aa2.29□□□□□ -2.04
RAD51B-208ENST00000479335 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
RAD51B-208ENST00000479335 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
RAD51B-208ENST00000479335 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
RAD51B-208ENST00000479335 AHNAKQ09666 5890 aaKnown RBP2.13□□□□□ -2.07
RAD51B-208ENST00000479335 MUC5ACP98088 5654 aa2.12□□□□□ -2.07
RAD51B-208ENST00000479335 MUC5BQ9HC84 5762 aaPredicted RBP2.05□□□□□ -2.08
RAD51B-208ENST00000479335 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
RAD51B-208ENST00000479335 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
RAD51B-208ENST00000479335 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.16
RAD51B-208ENST00000479335 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
RAD51B-208ENST00000479335 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 26.4 ms