RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 KRTAP25-1Q3LHN0 102 aa5.64□□□□□ -1.51
COL16A1-211ENST00000479100 MT1EP04732 61 aa5.62□□□□□ -1.51
COL16A1-211ENST00000479100 ROMO1P60602 79 aa5.54□□□□□ -1.52
COL16A1-211ENST00000479100 DSTQ03001 7570 aaKnown RBP5.52□□□□□ -1.53
COL16A1-211ENST00000479100 KRTAP19-3Q7Z4W3 81 aa5.5□□□□□ -1.53
COL16A1-211ENST00000479100 BRK1Q8WUW1 75 aa5.49□□□□□ -1.53
COL16A1-211ENST00000479100 KRTAP12-3P60328 96 aa5.46□□□□□ -1.54
COL16A1-211ENST00000479100 LCE5AQ5TCM9 118 aa5.46□□□□□ -1.54
COL16A1-211ENST00000479100 GPR98Q8WXG9 6306 aa5.45□□□□□ -1.54
COL16A1-211ENST00000479100 MT1LQ93083 61 aa5.42□□□□□ -1.54
COL16A1-211ENST00000479100 MT1GP13640 62 aa5.41□□□□□ -1.54
COL16A1-211ENST00000479100 KRTAP23-1A1A580 65 aa5.4□□□□□ -1.54
COL16A1-211ENST00000479100 PP632Q6XCG6 107 aa5.38□□□□□ -1.55
COL16A1-211ENST00000479100 MT1MQ8N339 61 aa5.33□□□□□ -1.56
COL16A1-211ENST00000479100 KRTAP4-9Q9BYQ8 210 aa5.32□□□□□ -1.56
COL16A1-211ENST00000479100 KRTAP4-3Q9BYR4 195 aa5.23□□□□□ -1.57
COL16A1-211ENST00000479100 PRO0628Q9UI54 55 aa5.23□□□□□ -1.57
COL16A1-211ENST00000479100 KRTAP15-1Q3LI76 137 aa5.21□□□□□ -1.58
COL16A1-211ENST00000479100 KRTAP4-7Q9BYR0 210 aa5.21□□□□□ -1.58
COL16A1-211ENST00000479100 PMAIP1Q13794 54 aa5.2□□□□□ -1.58
COL16A1-211ENST00000479100 HMCN1Q96RW7 5635 aa5.18□□□□□ -1.58
COL16A1-211ENST00000479100 LCE1DQ5T752 114 aa5.18□□□□□ -1.58
COL16A1-211ENST00000479100 LCE4AQ5TA78 99 aa5.13□□□□□ -1.59
COL16A1-211ENST00000479100 KRTAP19-4Q3LI73 84 aa5.11□□□□□ -1.59
COL16A1-211ENST00000479100 MT4P47944 62 aa5.07□□□□□ -1.6
COL16A1-211ENST00000479100 KRTAP5-4Q6L8H1 288 aa5.06□□□□□ -1.6
COL16A1-211ENST00000479100 LCE3CQ5T5A8 94 aa5.05□□□□□ -1.6
COL16A1-211ENST00000479100 AHNAK2Q8IVF2 5795 aa5.04□□□□□ -1.6
COL16A1-211ENST00000479100 KRTAP4-6Q9BYQ5 205 aa4.97□□□□□ -1.61
COL16A1-211ENST00000479100 KRTAP5-10Q6L8G5 202 aa4.93□□□□□ -1.62
COL16A1-211ENST00000479100 LOC100996750A0A140TA64 210 aa4.91□□□□□ -1.62
COL16A1-211ENST00000479100 PRAC1Q96KF2 57 aa4.9□□□□□ -1.63
COL16A1-211ENST00000479100 KTN1-AS1Q86SY8 53 aa4.88□□□□□ -1.63
COL16A1-211ENST00000479100 KRTAP5-5Q701N2 237 aaPredicted RBP4.82□□□□□ -1.64
COL16A1-211ENST00000479100 KRTAP5-3Q6L8H2 238 aa4.77□□□□□ -1.65
COL16A1-211ENST00000479100 KRTAP20-2Q3LI61 65 aa4.76□□□□□ -1.65
COL16A1-211ENST00000479100 SYNE1Q8NF91 8797 aaKnown RBP4.76□□□□□ -1.65
COL16A1-211ENST00000479100 KRTAP9-6A8MVA2 160 aa4.75□□□□□ -1.65
COL16A1-211ENST00000479100 KRTAP5-7Q6L8G8 165 aa4.75□□□□□ -1.65
COL16A1-211ENST00000479100 SPRR5A0A1B0GTR4 108 aa4.71□□□□□ -1.66
COL16A1-211ENST00000479100 KRTAP12-4P60329 112 aa4.67□□□□□ -1.66
COL16A1-211ENST00000479100 MT1AP04731 61 aa4.62□□□□□ -1.67
COL16A1-211ENST00000479100 SVIPQ8NHG7 77 aa4.6□□□□□ -1.67
COL16A1-211ENST00000479100 KRTAP6-1Q3LI64 71 aa4.58□□□□□ -1.68
COL16A1-211ENST00000479100 KRTAP9-4Q9BYQ2 154 aa4.44□□□□□ -1.7
COL16A1-211ENST00000479100 KRTAP5-2Q701N4 177 aa4.41□□□□□ -1.7
COL16A1-211ENST00000479100 KRTAP4-11Q9BYQ6 195 aa4.38□□□□□ -1.71
COL16A1-211ENST00000479100 KRTAP6-2Q3LI66 62 aa4.33□□□□□ -1.72
COL16A1-211ENST00000479100 KRTAP5-8O75690 187 aa4.26□□□□□ -1.73
COL16A1-211ENST00000479100 MT3P25713 68 aa4.23□□□□□ -1.73
COL16A1-211ENST00000479100 OBSCNQ5VST9 7968 aa4.23□□□□□ -1.73
COL16A1-211ENST00000479100 MUC5BQ9HC84 5762 aaPredicted RBP4.2□□□□□ -1.74
COL16A1-211ENST00000479100 AHNAKQ09666 5890 aaKnown RBP4.19□□□□□ -1.74
COL16A1-211ENST00000479100 MUC5ACP98088 5654 aa4.16□□□□□ -1.74
COL16A1-211ENST00000479100 LUZP6Q538Z0 58 aa4.09□□□□□ -1.75
COL16A1-211ENST00000479100 KRTAP9-9Q9BYP9 154 aa4.01□□□□□ -1.77
COL16A1-211ENST00000479100 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
COL16A1-211ENST00000479100 LCE1EQ5T753 118 aa3.76□□□□□ -1.81
COL16A1-211ENST00000479100 LCE3DQ9BYE3 92 aa3.72□□□□□ -1.81
COL16A1-211ENST00000479100 NDUFAF8A1L188 74 aa3.71□□□□□ -1.82
COL16A1-211ENST00000479100 LCE1BQ5T7P3 118 aa3.6□□□□□ -1.83
COL16A1-211ENST00000479100 KRTAP4-2Q9BYR5 136 aa3.56□□□□□ -1.84
COL16A1-211ENST00000479100 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
COL16A1-211ENST00000479100 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
COL16A1-211ENST00000479100 KRTAP4-12Q9BQ66 201 aa3.25□□□□□ -1.89
COL16A1-211ENST00000479100 A0A0A0MQY5 61 aa3.22□□□□□ -1.89
COL16A1-211ENST00000479100 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.2□□□□□ -1.9
COL16A1-211ENST00000479100 KRTAP5-11Q6L8G4 156 aa3.16□□□□□ -1.9
COL16A1-211ENST00000479100 INE1O15225 51 aa3.1□□□□□ -1.91
COL16A1-211ENST00000479100 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
COL16A1-211ENST00000479100 H3BS24 57 aa3.02□□□□□ -1.93
COL16A1-211ENST00000479100 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
COL16A1-211ENST00000479100 PRM1P04553 51 aa2.86□□□□□ -1.95
COL16A1-211ENST00000479100 PHGR1C9JFL3 82 aa2.84□□□□□ -1.95
COL16A1-211ENST00000479100 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
COL16A1-211ENST00000479100 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
COL16A1-211ENST00000479100 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
COL16A1-211ENST00000479100 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 25.5 ms