RNA–Protein interactions for RNA: ENST00000479008.1

SMARCAL1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-211ENST00000479008 PRAC1Q96KF2 57 aa4.9□□□□□ -1.63
SMARCAL1-211ENST00000479008 NEBP20929 6669 aa4.89□□□□□ -1.63
SMARCAL1-211ENST00000479008 KRTAP19-3Q7Z4W3 81 aa4.89□□□□□ -1.63
SMARCAL1-211ENST00000479008 MDN1Q9NU22 5596 aa4.89□□□□□ -1.63
SMARCAL1-211ENST00000479008 MT1LQ93083 61 aa4.87□□□□□ -1.63
SMARCAL1-211ENST00000479008 KTN1-AS1Q86SY8 53 aa4.86□□□□□ -1.63
SMARCAL1-211ENST00000479008 LCE5AQ5TCM9 118 aa4.82□□□□□ -1.64
SMARCAL1-211ENST00000479008 MT1GP13640 62 aa4.81□□□□□ -1.64
SMARCAL1-211ENST00000479008 KRTAP15-1Q3LI76 137 aa4.81□□□□□ -1.64
SMARCAL1-211ENST00000479008 SPRR2DP22532 72 aa4.8□□□□□ -1.64
SMARCAL1-211ENST00000479008 MT1MQ8N339 61 aa4.76□□□□□ -1.65
SMARCAL1-211ENST00000479008 KRTAP19-4Q3LI73 84 aa4.68□□□□□ -1.66
SMARCAL1-211ENST00000479008 KRTAP4-7Q9BYR0 210 aa4.68□□□□□ -1.66
SMARCAL1-211ENST00000479008 KRTAP20-1Q3LI63 56 aa4.65□□□□□ -1.67
SMARCAL1-211ENST00000479008 KRTAP4-3Q9BYR4 195 aa4.65□□□□□ -1.67
SMARCAL1-211ENST00000479008 KRTAP2-3P0C7H8 128 aa4.63□□□□□ -1.67
SMARCAL1-211ENST00000479008 LCE3CQ5T5A8 94 aa4.63□□□□□ -1.67
SMARCAL1-211ENST00000479008 KRTAP2-4Q9BYR9 128 aa4.63□□□□□ -1.67
SMARCAL1-211ENST00000479008 LCE3BQ5TA77 95 aa4.62□□□□□ -1.67
SMARCAL1-211ENST00000479008 SVIPQ8NHG7 77 aa4.62□□□□□ -1.67
SMARCAL1-211ENST00000479008 LOC100996750A0A140TA64 210 aa4.61□□□□□ -1.67
SMARCAL1-211ENST00000479008 KRTAP4-6Q9BYQ5 205 aa4.61□□□□□ -1.67
SMARCAL1-211ENST00000479008 KRTAP2-2Q9BYT5 123 aa4.51□□□□□ -1.69
SMARCAL1-211ENST00000479008 KRTAP2-1Q9BYU5 128 aa4.51□□□□□ -1.69
SMARCAL1-211ENST00000479008 DSTQ03001 7570 aaKnown RBP4.48□□□□□ -1.69
SMARCAL1-211ENST00000479008 KRTAP9-6A8MVA2 160 aa4.37□□□□□ -1.71
SMARCAL1-211ENST00000479008 SPRR5A0A1B0GTR4 108 aa4.31□□□□□ -1.72
SMARCAL1-211ENST00000479008 KRTAP5-5Q701N2 237 aaPredicted RBP4.3□□□□□ -1.72
SMARCAL1-211ENST00000479008 LCE4AQ5TA78 99 aa4.25□□□□□ -1.73
SMARCAL1-211ENST00000479008 KRTAP5-4Q6L8H1 288 aa4.24□□□□□ -1.73
SMARCAL1-211ENST00000479008 H3BS24 57 aa4.2□□□□□ -1.74
SMARCAL1-211ENST00000479008 KRTAP4-9Q9BYQ8 210 aa4.19□□□□□ -1.74
SMARCAL1-211ENST00000479008 MT4P47944 62 aa4.17□□□□□ -1.74
SMARCAL1-211ENST00000479008 MT1AP04731 61 aa4.16□□□□□ -1.74
SMARCAL1-211ENST00000479008 LCE1DQ5T752 114 aa4.14□□□□□ -1.75
SMARCAL1-211ENST00000479008 KRTAP6-1Q3LI64 71 aa4.11□□□□□ -1.75
SMARCAL1-211ENST00000479008 KRTAP12-4P60329 112 aa4.08□□□□□ -1.76
SMARCAL1-211ENST00000479008 SYNE1Q8NF91 8797 aaKnown RBP4.06□□□□□ -1.76
SMARCAL1-211ENST00000479008 LUZP6Q538Z0 58 aa4.03□□□□□ -1.76
SMARCAL1-211ENST00000479008 HMCN1Q96RW7 5635 aa4□□□□□ -1.77
SMARCAL1-211ENST00000479008 KRTAP20-2Q3LI61 65 aa3.99□□□□□ -1.77
SMARCAL1-211ENST00000479008 KRTAP4-12Q9BQ66 201 aa3.97□□□□□ -1.77
SMARCAL1-211ENST00000479008 KRTAP9-4Q9BYQ2 154 aa3.97□□□□□ -1.77
SMARCAL1-211ENST00000479008 KRTAP9-9Q9BYP9 154 aa3.92□□□□□ -1.78
SMARCAL1-211ENST00000479008 KRTAP5-3Q6L8H2 238 aa3.85□□□□□ -1.79
SMARCAL1-211ENST00000479008 KRTAP6-2Q3LI66 62 aa3.84□□□□□ -1.79
SMARCAL1-211ENST00000479008 KRTAP5-2Q701N4 177 aa3.8□□□□□ -1.8
SMARCAL1-211ENST00000479008 MT3P25713 68 aa3.77□□□□□ -1.81
SMARCAL1-211ENST00000479008 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
SMARCAL1-211ENST00000479008 NDUFAF8A1L188 74 aa3.71□□□□□ -1.82
SMARCAL1-211ENST00000479008 GPR98Q8WXG9 6306 aa3.6□□□□□ -1.83
SMARCAL1-211ENST00000479008 KRTAP5-10Q6L8G5 202 aa3.6□□□□□ -1.83
SMARCAL1-211ENST00000479008 KRTAP4-2Q9BYR5 136 aa3.58□□□□□ -1.84
SMARCAL1-211ENST00000479008 KRTAP4-11Q9BYQ6 195 aa3.52□□□□□ -1.85
SMARCAL1-211ENST00000479008 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
SMARCAL1-211ENST00000479008 LCE3DQ9BYE3 92 aa3.43□□□□□ -1.86
SMARCAL1-211ENST00000479008 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
SMARCAL1-211ENST00000479008 KRTAP5-7Q6L8G8 165 aa3.39□□□□□ -1.87
SMARCAL1-211ENST00000479008 A0A0A0MQY5 61 aa3.35□□□□□ -1.87
SMARCAL1-211ENST00000479008 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
SMARCAL1-211ENST00000479008 KRTAP5-1Q6L8H4 278 aa3.33□□□□□ -1.88
SMARCAL1-211ENST00000479008 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
SMARCAL1-211ENST00000479008 MUC5ACP98088 5654 aa3.18□□□□□ -1.9
SMARCAL1-211ENST00000479008 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.91
SMARCAL1-211ENST00000479008 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
SMARCAL1-211ENST00000479008 INE1O15225 51 aa3.05□□□□□ -1.92
SMARCAL1-211ENST00000479008 MUC5BQ9HC84 5762 aaPredicted RBP2.94□□□□□ -1.94
SMARCAL1-211ENST00000479008 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
SMARCAL1-211ENST00000479008 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
SMARCAL1-211ENST00000479008 KRTAP5-11Q6L8G4 156 aa2.77□□□□□ -1.97
SMARCAL1-211ENST00000479008 PRM1P04553 51 aa2.76□□□□□ -1.97
SMARCAL1-211ENST00000479008 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
SMARCAL1-211ENST00000479008 LCE1FQ5T754 118 aa2.57□□□□□ -2
SMARCAL1-211ENST00000479008 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
SMARCAL1-211ENST00000479008 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
SMARCAL1-211ENST00000479008 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
SMARCAL1-211ENST00000479008 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
SMARCAL1-211ENST00000479008 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 203.1 ms