RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 CAMK2N1Q7Z7J9 78 aa1.81□□□□□ -2.12
USP25-208ENST00000478932 KRTAP25-1Q3LHN0 102 aa1.81□□□□□ -2.12
USP25-208ENST00000478932 SPRR2GQ9BYE4 73 aa1.8□□□□□ -2.12
USP25-208ENST00000478932 KRTAP4-3Q9BYR4 195 aa1.78□□□□□ -2.12
USP25-208ENST00000478932 PLAC4Q8WY50 150 aa1.76□□□□□ -2.13
USP25-208ENST00000478932 LCE1AQ5T7P2 110 aa1.75□□□□□ -2.13
USP25-208ENST00000478932 MT1BP07438 61 aa1.73□□□□□ -2.13
USP25-208ENST00000478932 KRTAP19-8Q3LI54 63 aa1.73□□□□□ -2.13
USP25-208ENST00000478932 LUZP6Q538Z0 58 aa1.71□□□□□ -2.13
USP25-208ENST00000478932 KMT2DO14686 5537 aa1.71□□□□□ -2.14
USP25-208ENST00000478932 TNP1P09430 55 aa1.71□□□□□ -2.14
USP25-208ENST00000478932 OBSCNQ5VST9 7968 aa1.71□□□□□ -2.14
USP25-208ENST00000478932 KRTAP10-5P60370 271 aa1.7□□□□□ -2.14
USP25-208ENST00000478932 MT1XP80297 61 aa1.69□□□□□ -2.14
USP25-208ENST00000478932 LCE1EQ5T753 118 aa1.68□□□□□ -2.14
USP25-208ENST00000478932 AHNAKQ09666 5890 aaKnown RBP1.67□□□□□ -2.14
USP25-208ENST00000478932 SSPOA2VEC9 5147 aa1.67□□□□□ -2.14
USP25-208ENST00000478932 PP632Q6XCG6 107 aa1.66□□□□□ -2.14
USP25-208ENST00000478932 LCE3AQ5TA76 89 aa1.65□□□□□ -2.15
USP25-208ENST00000478932 PRO2289Q9P1D8 64 aa1.64□□□□□ -2.15
USP25-208ENST00000478932 CRCT1Q9UGL9 99 aa1.64□□□□□ -2.15
USP25-208ENST00000478932 AHNAK2Q8IVF2 5795 aa1.63□□□□□ -2.15
USP25-208ENST00000478932 KRTAP2-2Q9BYT5 123 aa1.63□□□□□ -2.15
USP25-208ENST00000478932 KRTAP10-12P60413 245 aa1.61□□□□□ -2.15
USP25-208ENST00000478932 KRTAP8-1Q8IUC2 63 aa1.59□□□□□ -2.16
USP25-208ENST00000478932 FCGBPQ9Y6R7 5405 aaPredicted RBP1.59□□□□□ -2.16
USP25-208ENST00000478932 MACF1Q9UPN3 7388 aaKnown RBP1.58□□□□□ -2.16
USP25-208ENST00000478932 KRTAP12-3P60328 96 aa1.58□□□□□ -2.16
USP25-208ENST00000478932 SYNE2Q8WXH0 6885 aaKnown RBP1.57□□□□□ -2.16
USP25-208ENST00000478932 DSTQ03001 7570 aaKnown RBP1.57□□□□□ -2.16
USP25-208ENST00000478932 NDUFAF8A1L188 74 aa1.56□□□□□ -2.16
USP25-208ENST00000478932 MUC12Q9UKN1 5478 aa1.56□□□□□ -2.16
USP25-208ENST00000478932 KRTAP19-5Q3LI72 72 aa1.55□□□□□ -2.16
USP25-208ENST00000478932 KRTAP19-6Q3LI70 58 aa1.54□□□□□ -2.16
USP25-208ENST00000478932 KRTAP19-7Q3SYF9 63 aa1.52□□□□□ -2.17
USP25-208ENST00000478932 SPRR5A0A1B0GTR4 108 aa1.51□□□□□ -2.17
USP25-208ENST00000478932 INE1O15225 51 aa1.5□□□□□ -2.17
USP25-208ENST00000478932 MT3P25713 68 aa1.5□□□□□ -2.17
USP25-208ENST00000478932 LCE1FQ5T754 118 aa1.49□□□□□ -2.17
USP25-208ENST00000478932 MDN1Q9NU22 5596 aa1.47□□□□□ -2.17
USP25-208ENST00000478932 LCE3CQ5T5A8 94 aa1.47□□□□□ -2.17
USP25-208ENST00000478932 MT1EP04732 61 aa1.46□□□□□ -2.18
USP25-208ENST00000478932 MT1LQ93083 61 aa1.45□□□□□ -2.18
USP25-208ENST00000478932 KRTAP9-6A8MVA2 160 aa1.43□□□□□ -2.18
USP25-208ENST00000478932 KRTAP6-3Q3LI67 103 aa1.43□□□□□ -2.18
USP25-208ENST00000478932 SPRR2FQ96RM1 72 aa1.43□□□□□ -2.18
USP25-208ENST00000478932 MUC5ACP98088 5654 aa1.41□□□□□ -2.18
USP25-208ENST00000478932 SYNE1Q8NF91 8797 aaKnown RBP1.4□□□□□ -2.19
USP25-208ENST00000478932 KRTAP19-3Q7Z4W3 81 aa1.39□□□□□ -2.19
USP25-208ENST00000478932 MT1GP13640 62 aa1.38□□□□□ -2.19
USP25-208ENST00000478932 MT1MQ8N339 61 aa1.38□□□□□ -2.19
USP25-208ENST00000478932 KRTAP20-1Q3LI63 56 aa1.34□□□□□ -2.19
USP25-208ENST00000478932 LCE3EQ5T5B0 92 aa1.33□□□□□ -2.2
USP25-208ENST00000478932 NEBP20929 6669 aa1.32□□□□□ -2.2
USP25-208ENST00000478932 SPRR2EP22531 72 aa1.32□□□□□ -2.2
USP25-208ENST00000478932 SPRR2BP35325 72 aa1.32□□□□□ -2.2
USP25-208ENST00000478932 SPRR2AP35326 72 aa1.32□□□□□ -2.2
USP25-208ENST00000478932 KRTAP2-3P0C7H8 128 aa1.3□□□□□ -2.2
USP25-208ENST00000478932 KRTAP2-4Q9BYR9 128 aa1.3□□□□□ -2.2
USP25-208ENST00000478932 KRTAP2-1Q9BYU5 128 aa1.3□□□□□ -2.2
USP25-208ENST00000478932 SPRR2DP22532 72 aa1.26□□□□□ -2.21
USP25-208ENST00000478932 KRTAP6-1Q3LI64 71 aa1.24□□□□□ -2.21
USP25-208ENST00000478932 MT1AP04731 61 aa1.2□□□□□ -2.22
USP25-208ENST00000478932 KRTAP12-4P60329 112 aa1.16□□□□□ -2.22
USP25-208ENST00000478932 KRTAP6-2Q3LI66 62 aa1.14□□□□□ -2.23
USP25-208ENST00000478932 MT4P47944 62 aa1.14□□□□□ -2.23
USP25-208ENST00000478932 LCE3DQ9BYE3 92 aa1.13□□□□□ -2.23
USP25-208ENST00000478932 KRTAP20-2Q3LI61 65 aa1.07□□□□□ -2.24
USP25-208ENST00000478932 LCE1CQ5T751 118 aa1.04□□□□□ -2.24
USP25-208ENST00000478932 LCE1BQ5T7P3 118 aa1.04□□□□□ -2.24
USP25-208ENST00000478932 KRTAP5-10Q6L8G5 202 aa1.03□□□□□ -2.24
USP25-208ENST00000478932 KRTAP5-7Q6L8G8 165 aa1.02□□□□□ -2.25
USP25-208ENST00000478932 PRM1P04553 51 aa0.99□□□□□ -2.25
USP25-208ENST00000478932 MUC19Q7Z5P9 8384 aa0.87□□□□□ -2.27
USP25-208ENST00000478932 KRTAP21-2Q3LI59 83 aa0.8□□□□□ -2.28
USP25-208ENST00000478932 PHGR1C9JFL3 82 aa0.67□□□□□ -2.3
USP25-208ENST00000478932 KRTAP21-1Q3LI58 79 aa0.59□□□□□ -2.31
USP25-208ENST00000478932 MUC16Q8WXI7 14507 aa0.58□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 64.9 ms