RNA–Protein interactions for RNA: ENST00000478678.5

PBX2-202, Transcript of PBX homeobox 2, humanhuman

TSL 1 (best)

Gene PBX2, Length 1,320 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX2-202ENST00000478678 KRTAP4-9Q9BYQ8 210 aa8.03□□□□□ -1.12
PBX2-202ENST00000478678 CDC42SE1Q9NRR8 79 aa8.03□□□□□ -1.12
PBX2-202ENST00000478678 PRO0628Q9UI54 55 aa8□□□□□ -1.13
PBX2-202ENST00000478678 MIR22HGQ0VDD5 57 aa7.98□□□□□ -1.13
PBX2-202ENST00000478678 MT1GP13640 62 aa7.96□□□□□ -1.14
PBX2-202ENST00000478678 C10orf95Q9H7T3 257 aa7.96□□□□□ -1.14
PBX2-202ENST00000478678 LCE3AQ5TA76 89 aa7.94□□□□□ -1.14
PBX2-202ENST00000478678 MT1LQ93083 61 aa7.93□□□□□ -1.14
PBX2-202ENST00000478678 MT1MQ8N339 61 aa7.92□□□□□ -1.14
PBX2-202ENST00000478678 PP632Q6XCG6 107 aa7.86□□□□□ -1.15
PBX2-202ENST00000478678 KRTAP4-3Q9BYR4 195 aa7.84□□□□□ -1.15
PBX2-202ENST00000478678 TNP1P09430 55 aa7.83□□□□□ -1.16
PBX2-202ENST00000478678 LCE1DQ5T752 114 aa7.8□□□□□ -1.16
PBX2-202ENST00000478678 MT4P47944 62 aa7.71□□□□□ -1.18
PBX2-202ENST00000478678 PMAIP1Q13794 54 aa7.69□□□□□ -1.18
PBX2-202ENST00000478678 K7ERS5 55 aa7.68□□□□□ -1.18
PBX2-202ENST00000478678 HMCN1Q96RW7 5635 aa7.67□□□□□ -1.18
PBX2-202ENST00000478678 LCE4AQ5TA78 99 aa7.66□□□□□ -1.18
PBX2-202ENST00000478678 KRTAP4-7Q9BYR0 210 aa7.63□□□□□ -1.19
PBX2-202ENST00000478678 KRTAP12-3P60328 96 aa7.57□□□□□ -1.2
PBX2-202ENST00000478678 KRTAP5-4Q6L8H1 288 aa7.54□□□□□ -1.2
PBX2-202ENST00000478678 SVIPQ8NHG7 77 aa7.51□□□□□ -1.21
PBX2-202ENST00000478678 AHNAK2Q8IVF2 5795 aa7.49□□□□□ -1.21
PBX2-202ENST00000478678 KRTAP4-6Q9BYQ5 205 aa7.49□□□□□ -1.21
PBX2-202ENST00000478678 KRTAP5-10Q6L8G5 202 aa7.44□□□□□ -1.22
PBX2-202ENST00000478678 KTN1-AS1Q86SY8 53 aa7.4□□□□□ -1.22
PBX2-202ENST00000478678 KRTAP25-1Q3LHN0 102 aa7.32□□□□□ -1.24
PBX2-202ENST00000478678 ROMO1P60602 79 aa7.31□□□□□ -1.24
PBX2-202ENST00000478678 KRTAP5-5Q701N2 237 aaPredicted RBP7.25□□□□□ -1.25
PBX2-202ENST00000478678 LOC100996750A0A140TA64 210 aa7.23□□□□□ -1.25
PBX2-202ENST00000478678 KRTAP5-7Q6L8G8 165 aa7.19□□□□□ -1.26
PBX2-202ENST00000478678 KRTAP5-3Q6L8H2 238 aa7.17□□□□□ -1.26
PBX2-202ENST00000478678 KRTAP20-2Q3LI61 65 aa7.16□□□□□ -1.26
PBX2-202ENST00000478678 PRAC1Q96KF2 57 aa7.11□□□□□ -1.27
PBX2-202ENST00000478678 SYNE1Q8NF91 8797 aaKnown RBP7.05□□□□□ -1.28
PBX2-202ENST00000478678 SPRR5A0A1B0GTR4 108 aa7.03□□□□□ -1.28
PBX2-202ENST00000478678 KRTAP15-1Q3LI76 137 aa7.02□□□□□ -1.28
PBX2-202ENST00000478678 KRTAP12-4P60329 112 aa7□□□□□ -1.29
PBX2-202ENST00000478678 KRTAP23-1A1A580 65 aa6.98□□□□□ -1.29
PBX2-202ENST00000478678 LCE3CQ5T5A8 94 aa6.96□□□□□ -1.3
PBX2-202ENST00000478678 KRTAP19-4Q3LI73 84 aa6.92□□□□□ -1.3
PBX2-202ENST00000478678 KRTAP6-1Q3LI64 71 aa6.74□□□□□ -1.33
PBX2-202ENST00000478678 MT1AP04731 61 aa6.71□□□□□ -1.34
PBX2-202ENST00000478678 KRTAP9-6A8MVA2 160 aa6.68□□□□□ -1.34
PBX2-202ENST00000478678 KRTAP5-2Q701N4 177 aa6.61□□□□□ -1.35
PBX2-202ENST00000478678 KRTAP4-11Q9BYQ6 195 aa6.56□□□□□ -1.36
PBX2-202ENST00000478678 KRTAP9-4Q9BYQ2 154 aa6.48□□□□□ -1.37
PBX2-202ENST00000478678 KRTAP6-2Q3LI66 62 aa6.44□□□□□ -1.38
PBX2-202ENST00000478678 KRTAP5-8O75690 187 aa6.37□□□□□ -1.39
PBX2-202ENST00000478678 OBSCNQ5VST9 7968 aa6.26□□□□□ -1.41
PBX2-202ENST00000478678 MUC5ACP98088 5654 aa6.24□□□□□ -1.41
PBX2-202ENST00000478678 AHNAKQ09666 5890 aaKnown RBP6.22□□□□□ -1.41
PBX2-202ENST00000478678 MUC5BQ9HC84 5762 aaPredicted RBP6.18□□□□□ -1.42
PBX2-202ENST00000478678 MT3P25713 68 aa6.1□□□□□ -1.43
PBX2-202ENST00000478678 KRTAP9-9Q9BYP9 154 aa6.04□□□□□ -1.44
PBX2-202ENST00000478678 KRTAP5-1Q6L8H4 278 aa5.96□□□□□ -1.46
PBX2-202ENST00000478678 LUZP6Q538Z0 58 aa5.91□□□□□ -1.46
PBX2-202ENST00000478678 NDUFAF8A1L188 74 aa5.74□□□□□ -1.49
PBX2-202ENST00000478678 LCE1EQ5T753 118 aa5.58□□□□□ -1.52
PBX2-202ENST00000478678 LCE1BQ5T7P3 118 aa5.39□□□□□ -1.55
PBX2-202ENST00000478678 KRTAP4-2Q9BYR5 136 aa5.39□□□□□ -1.55
PBX2-202ENST00000478678 LCE1CQ5T751 118 aa5.21□□□□□ -1.58
PBX2-202ENST00000478678 H3BS24 57 aa5.17□□□□□ -1.58
PBX2-202ENST00000478678 A0A0A0MQY5 61 aa5.16□□□□□ -1.58
PBX2-202ENST00000478678 KRTAP4-12Q9BQ66 201 aa5.03□□□□□ -1.6
PBX2-202ENST00000478678 LCE3DQ9BYE3 92 aa4.97□□□□□ -1.61
PBX2-202ENST00000478678 INE1O15225 51 aa4.83□□□□□ -1.64
PBX2-202ENST00000478678 KRTAP5-11Q6L8G4 156 aa4.73□□□□□ -1.65
PBX2-202ENST00000478678 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.72□□□□□ -1.65
PBX2-202ENST00000478678 LCE3EQ5T5B0 92 aa4.67□□□□□ -1.66
PBX2-202ENST00000478678 LCE1FQ5T754 118 aa4.59□□□□□ -1.67
PBX2-202ENST00000478678 KRTAP21-2Q3LI59 83 aa4.43□□□□□ -1.7
PBX2-202ENST00000478678 PHGR1C9JFL3 82 aa4.31□□□□□ -1.72
PBX2-202ENST00000478678 KRTAP4-4Q9BYR3 166 aa4.15□□□□□ -1.75
PBX2-202ENST00000478678 MUC19Q7Z5P9 8384 aa3.87□□□□□ -1.79
PBX2-202ENST00000478678 PRM1P04553 51 aa3.79□□□□□ -1.8
PBX2-202ENST00000478678 KRTAP21-1Q3LI58 79 aa3.26□□□□□ -1.89
PBX2-202ENST00000478678 MUC16Q8WXI7 14507 aa2.74□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms