RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 KRTAP4-3Q9BYR4 195 aa4.49□□□□□ -1.69
TDP2-204ENST00000478507 KRTAP5-7Q6L8G8 165 aa4.48□□□□□ -1.69
TDP2-204ENST00000478507 KRTAP5-3Q6L8H2 238 aa4.43□□□□□ -1.7
TDP2-204ENST00000478507 KRTAP12-1P59990 96 aa4.37□□□□□ -1.71
TDP2-204ENST00000478507 SPATA8Q6RVD6 105 aa4.36□□□□□ -1.71
TDP2-204ENST00000478507 C10orf95Q9H7T3 257 aa4.36□□□□□ -1.71
TDP2-204ENST00000478507 COX7CP15954 63 aa4.35□□□□□ -1.71
TDP2-204ENST00000478507 SPINT4Q6UDR6 99 aa4.35□□□□□ -1.71
TDP2-204ENST00000478507 COA5Q86WW8 74 aa4.35□□□□□ -1.71
TDP2-204ENST00000478507 LCE3AQ5TA76 89 aa4.33□□□□□ -1.72
TDP2-204ENST00000478507 KRTAP20-2Q3LI61 65 aa4.32□□□□□ -1.72
TDP2-204ENST00000478507 SEC61GP60059 68 aa4.3□□□□□ -1.72
TDP2-204ENST00000478507 H7BZZ5 65 aa4.28□□□□□ -1.72
TDP2-204ENST00000478507 KRTAP5-5Q701N2 237 aaPredicted RBP4.28□□□□□ -1.72
TDP2-204ENST00000478507 SERP1Q9Y6X1 66 aa4.28□□□□□ -1.72
TDP2-204ENST00000478507 SPRR5A0A1B0GTR4 108 aa4.27□□□□□ -1.73
TDP2-204ENST00000478507 A0A1B0GU33 70 aa4.27□□□□□ -1.73
TDP2-204ENST00000478507 A0A0A0MQY5 61 aa4.21□□□□□ -1.74
TDP2-204ENST00000478507 ANAPC13Q9BS18 74 aa4.21□□□□□ -1.74
TDP2-204ENST00000478507 TNP1P09430 55 aa4.2□□□□□ -1.74
TDP2-204ENST00000478507 KRTAP12-3P60328 96 aa4.15□□□□□ -1.75
TDP2-204ENST00000478507 KRTAP12-4P60329 112 aa4.15□□□□□ -1.75
TDP2-204ENST00000478507 A0A1B0GU69 56 aa4.14□□□□□ -1.75
TDP2-204ENST00000478507 A8MU10 97 aa4.14□□□□□ -1.75
TDP2-204ENST00000478507 SMIM26A0A096LP01 95 aa4.13□□□□□ -1.75
TDP2-204ENST00000478507 SYNE1Q8NF91 8797 aaKnown RBP4.12□□□□□ -1.75
TDP2-204ENST00000478507 ATP5EP56381 51 aaPredicted RBP4.11□□□□□ -1.75
TDP2-204ENST00000478507 CCDC179H3BU77 68 aa4.1□□□□□ -1.75
TDP2-204ENST00000478507 PRR15LQ9BU68 103 aa4.05□□□□□ -1.76
TDP2-204ENST00000478507 TMEM258P61165 79 aa3.99□□□□□ -1.77
TDP2-204ENST00000478507 LINC01558Q9Y6Z2 57 aa3.99□□□□□ -1.77
TDP2-204ENST00000478507 KRTAP5-2Q701N4 177 aa3.97□□□□□ -1.77
TDP2-204ENST00000478507 AHNAKQ09666 5890 aaKnown RBP3.96□□□□□ -1.78
TDP2-204ENST00000478507 MUC5ACP98088 5654 aa3.95□□□□□ -1.78
TDP2-204ENST00000478507 MUC5BQ9HC84 5762 aaPredicted RBP3.93□□□□□ -1.78
TDP2-204ENST00000478507 KRTAP5-8O75690 187 aa3.91□□□□□ -1.78
TDP2-204ENST00000478507 UQCR11O14957 56 aa3.9□□□□□ -1.79
TDP2-204ENST00000478507 MT1AP04731 61 aa3.84□□□□□ -1.79
TDP2-204ENST00000478507 MT3P25713 68 aa3.84□□□□□ -1.79
TDP2-204ENST00000478507 KRTAP6-1Q3LI64 71 aa3.84□□□□□ -1.79
TDP2-204ENST00000478507 KRTAP25-1Q3LHN0 102 aa3.82□□□□□ -1.8
TDP2-204ENST00000478507 OBSCNQ5VST9 7968 aa3.81□□□□□ -1.8
TDP2-204ENST00000478507 MIR22HGQ0VDD5 57 aa3.8□□□□□ -1.8
TDP2-204ENST00000478507 LCE3CQ5T5A8 94 aa3.8□□□□□ -1.8
TDP2-204ENST00000478507 V9GYY9 64 aa3.79□□□□□ -1.8
TDP2-204ENST00000478507 K7ERS5 55 aa3.76□□□□□ -1.81
TDP2-204ENST00000478507 Q1T7F1 81 aa3.74□□□□□ -1.81
TDP2-204ENST00000478507 PSPHP1O15172 72 aa3.73□□□□□ -1.81
TDP2-204ENST00000478507 KRTAP6-2Q3LI66 62 aa3.72□□□□□ -1.81
TDP2-204ENST00000478507 KRTAP9-6A8MVA2 160 aa3.65□□□□□ -1.83
TDP2-204ENST00000478507 A6NED7 52 aa3.62□□□□□ -1.83
TDP2-204ENST00000478507 KRTAP5-1Q6L8H4 278 aa3.61□□□□□ -1.83
TDP2-204ENST00000478507 RPS28P62857 69 aaKnown RBP3.55□□□□□ -1.84
TDP2-204ENST00000478507 CDC42SE1Q9NRR8 79 aa3.55□□□□□ -1.84
TDP2-204ENST00000478507 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
TDP2-204ENST00000478507 PRAC1Q96KF2 57 aa3.49□□□□□ -1.85
TDP2-204ENST00000478507 ROMO1P60602 79 aa3.48□□□□□ -1.85
TDP2-204ENST00000478507 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
TDP2-204ENST00000478507 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
TDP2-204ENST00000478507 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
TDP2-204ENST00000478507 BRK1Q8WUW1 75 aa3.11□□□□□ -1.91
TDP2-204ENST00000478507 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
TDP2-204ENST00000478507 LCE1CQ5T751 118 aa3.09□□□□□ -1.91
TDP2-204ENST00000478507 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
TDP2-204ENST00000478507 PMAIP1Q13794 54 aa2.93□□□□□ -1.94
TDP2-204ENST00000478507 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
TDP2-204ENST00000478507 PRO0628Q9UI54 55 aa2.71□□□□□ -1.98
TDP2-204ENST00000478507 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
TDP2-204ENST00000478507 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
TDP2-204ENST00000478507 KTN1-AS1Q86SY8 53 aa2.6□□□□□ -1.99
TDP2-204ENST00000478507 KRTAP21-2Q3LI59 83 aa2.56□□□□□ -2
TDP2-204ENST00000478507 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
TDP2-204ENST00000478507 LUZP6Q538Z0 58 aa2.42□□□□□ -2.02
TDP2-204ENST00000478507 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.03
TDP2-204ENST00000478507 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
TDP2-204ENST00000478507 PRM1P04553 51 aa1.77□□□□□ -2.13
TDP2-204ENST00000478507 INE1O15225 51 aa1.75□□□□□ -2.13
TDP2-204ENST00000478507 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 95.3 ms