RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 KRTAP9-7A8MTY7 169 aa3.69□□□□□ -1.82
COL13A1-207ENST00000478219 MT2AP02795 61 aa3.69□□□□□ -1.82
COL13A1-207ENST00000478219 MT1BP07438 61 aa3.68□□□□□ -1.82
COL13A1-207ENST00000478219 KMT2DO14686 5537 aa3.67□□□□□ -1.82
COL13A1-207ENST00000478219 KRTAP9-6A8MVA2 160 aa3.63□□□□□ -1.83
COL13A1-207ENST00000478219 LCE3CQ5T5A8 94 aa3.61□□□□□ -1.83
COL13A1-207ENST00000478219 KRTAP19-5Q3LI72 72 aa3.58□□□□□ -1.84
COL13A1-207ENST00000478219 USH2AO75445 5202 aa3.52□□□□□ -1.85
COL13A1-207ENST00000478219 KRTAP2-3P0C7H8 128 aa3.52□□□□□ -1.85
COL13A1-207ENST00000478219 KRTAP2-4Q9BYR9 128 aa3.52□□□□□ -1.85
COL13A1-207ENST00000478219 KRTAP2-1Q9BYU5 128 aa3.52□□□□□ -1.85
COL13A1-207ENST00000478219 LCE5AQ5TCM9 118 aa3.51□□□□□ -1.85
COL13A1-207ENST00000478219 KRTAP9-3Q9BYQ3 159 aa3.48□□□□□ -1.85
COL13A1-207ENST00000478219 KRTAP2-2Q9BYT5 123 aa3.43□□□□□ -1.86
COL13A1-207ENST00000478219 KRTAP19-7Q3SYF9 63 aa3.34□□□□□ -1.88
COL13A1-207ENST00000478219 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
COL13A1-207ENST00000478219 FSIP2Q5CZC0 6907 aa3.25□□□□□ -1.89
COL13A1-207ENST00000478219 MT1LQ93083 61 aa3.24□□□□□ -1.89
COL13A1-207ENST00000478219 KRTAP12-4P60329 112 aa3.23□□□□□ -1.89
COL13A1-207ENST00000478219 KRTAP4-3Q9BYR4 195 aa3.18□□□□□ -1.9
COL13A1-207ENST00000478219 MT1EP04732 61 aa3.18□□□□□ -1.9
COL13A1-207ENST00000478219 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
COL13A1-207ENST00000478219 KRTAP19-6Q3LI70 58 aa3.15□□□□□ -1.91
COL13A1-207ENST00000478219 LCE1AQ5T7P2 110 aa3.15□□□□□ -1.91
COL13A1-207ENST00000478219 CRCT1Q9UGL9 99 aa3.13□□□□□ -1.91
COL13A1-207ENST00000478219 MT1GP13640 62 aa3.12□□□□□ -1.91
COL13A1-207ENST00000478219 FCGBPQ9Y6R7 5405 aaPredicted RBP3.1□□□□□ -1.91
COL13A1-207ENST00000478219 DSTQ03001 7570 aaKnown RBP3.09□□□□□ -1.91
COL13A1-207ENST00000478219 MUC12Q9UKN1 5478 aa3.07□□□□□ -1.92
COL13A1-207ENST00000478219 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.06□□□□□ -1.92
COL13A1-207ENST00000478219 SYNE1Q8NF91 8797 aaKnown RBP3.05□□□□□ -1.92
COL13A1-207ENST00000478219 SSPOA2VEC9 5147 aa3.02□□□□□ -1.93
COL13A1-207ENST00000478219 KRTAP6-3Q3LI67 103 aa3.01□□□□□ -1.93
COL13A1-207ENST00000478219 MT1MQ8N339 61 aa2.95□□□□□ -1.94
COL13A1-207ENST00000478219 PRM1P04553 51 aa2.92□□□□□ -1.94
COL13A1-207ENST00000478219 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
COL13A1-207ENST00000478219 KRTAP5-5Q701N2 237 aaPredicted RBP2.91□□□□□ -1.94
COL13A1-207ENST00000478219 KRTAP19-3Q7Z4W3 81 aa2.89□□□□□ -1.95
COL13A1-207ENST00000478219 MACF1Q9UPN3 7388 aaKnown RBP2.84□□□□□ -1.96
COL13A1-207ENST00000478219 SYNE2Q8WXH0 6885 aaKnown RBP2.83□□□□□ -1.96
COL13A1-207ENST00000478219 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
COL13A1-207ENST00000478219 MT1AP04731 61 aa2.82□□□□□ -1.96
COL13A1-207ENST00000478219 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
COL13A1-207ENST00000478219 KRTAP6-1Q3LI64 71 aa2.8□□□□□ -1.96
COL13A1-207ENST00000478219 MT3P25713 68 aa2.79□□□□□ -1.96
COL13A1-207ENST00000478219 KRTAP5-9P26371 169 aa2.79□□□□□ -1.96
COL13A1-207ENST00000478219 SPRR2FQ96RM1 72 aa2.78□□□□□ -1.96
COL13A1-207ENST00000478219 HMCN1Q96RW7 5635 aa2.73□□□□□ -1.97
COL13A1-207ENST00000478219 KRTAP6-2Q3LI66 62 aa2.72□□□□□ -1.97
COL13A1-207ENST00000478219 NEBP20929 6669 aa2.63□□□□□ -1.99
COL13A1-207ENST00000478219 MDN1Q9NU22 5596 aa2.61□□□□□ -1.99
COL13A1-207ENST00000478219 SPRR2EP22531 72 aa2.61□□□□□ -1.99
COL13A1-207ENST00000478219 SPRR2BP35325 72 aa2.61□□□□□ -1.99
COL13A1-207ENST00000478219 SPRR2AP35326 72 aa2.61□□□□□ -1.99
COL13A1-207ENST00000478219 KRTAP5-4Q6L8H1 288 aa2.6□□□□□ -1.99
COL13A1-207ENST00000478219 SPRR2DP22532 72 aa2.52□□□□□ -2.01
COL13A1-207ENST00000478219 KRTAP20-1Q3LI63 56 aa2.51□□□□□ -2.01
COL13A1-207ENST00000478219 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
COL13A1-207ENST00000478219 KRTAP5-1Q6L8H4 278 aa2.43□□□□□ -2.02
COL13A1-207ENST00000478219 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
COL13A1-207ENST00000478219 GPR98Q8WXG9 6306 aa2.34□□□□□ -2.04
COL13A1-207ENST00000478219 KRTAP5-2Q701N4 177 aa2.28□□□□□ -2.04
COL13A1-207ENST00000478219 MUC5BQ9HC84 5762 aaPredicted RBP2.22□□□□□ -2.05
COL13A1-207ENST00000478219 MUC5ACP98088 5654 aa2.2□□□□□ -2.06
COL13A1-207ENST00000478219 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
COL13A1-207ENST00000478219 KRTAP20-2Q3LI61 65 aa2.14□□□□□ -2.07
COL13A1-207ENST00000478219 MT4P47944 62 aa2.14□□□□□ -2.07
COL13A1-207ENST00000478219 KRTAP5-8O75690 187 aa2.11□□□□□ -2.07
COL13A1-207ENST00000478219 KRTAP5-10Q6L8G5 202 aa2.05□□□□□ -2.08
COL13A1-207ENST00000478219 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
COL13A1-207ENST00000478219 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
COL13A1-207ENST00000478219 AHNAK2Q8IVF2 5795 aa2.01□□□□□ -2.09
COL13A1-207ENST00000478219 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
COL13A1-207ENST00000478219 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
COL13A1-207ENST00000478219 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.12
COL13A1-207ENST00000478219 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
COL13A1-207ENST00000478219 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
COL13A1-207ENST00000478219 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 65.5 ms