RNA–Protein interactions for RNA: ENST00000478209.1

PDZRN3-207, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 4

Gene PDZRN3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-207ENST00000478209 KRTAP19-3Q7Z4W3 81 aa6.01□□□□□ -1.45
PDZRN3-207ENST00000478209 KRTAP2-2Q9BYT5 123 aa5.99□□□□□ -1.45
PDZRN3-207ENST00000478209 KRTAP2-1Q9BYU5 128 aa5.99□□□□□ -1.45
PDZRN3-207ENST00000478209 LCE5AQ5TCM9 118 aa5.98□□□□□ -1.45
PDZRN3-207ENST00000478209 LCE3BQ5TA77 95 aa5.97□□□□□ -1.45
PDZRN3-207ENST00000478209 KRTAP25-1Q3LHN0 102 aa5.95□□□□□ -1.46
PDZRN3-207ENST00000478209 MT1GP13640 62 aa5.9□□□□□ -1.46
PDZRN3-207ENST00000478209 PP632Q6XCG6 107 aa5.88□□□□□ -1.47
PDZRN3-207ENST00000478209 MT1LQ93083 61 aa5.87□□□□□ -1.47
PDZRN3-207ENST00000478209 KRTAP12-3P60328 96 aa5.84□□□□□ -1.47
PDZRN3-207ENST00000478209 KRTAP19-4Q3LI73 84 aa5.83□□□□□ -1.48
PDZRN3-207ENST00000478209 CDC42SE1Q9NRR8 79 aa5.83□□□□□ -1.48
PDZRN3-207ENST00000478209 A0A0A0MQY5 61 aa5.8□□□□□ -1.48
PDZRN3-207ENST00000478209 MT1MQ8N339 61 aa5.79□□□□□ -1.48
PDZRN3-207ENST00000478209 ROMO1P60602 79 aa5.73□□□□□ -1.49
PDZRN3-207ENST00000478209 DSTQ03001 7570 aaKnown RBP5.66□□□□□ -1.5
PDZRN3-207ENST00000478209 KRTAP4-3Q9BYR4 195 aa5.62□□□□□ -1.51
PDZRN3-207ENST00000478209 KRTAP4-7Q9BYR0 210 aa5.57□□□□□ -1.52
PDZRN3-207ENST00000478209 PRO0628Q9UI54 55 aa5.55□□□□□ -1.52
PDZRN3-207ENST00000478209 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
PDZRN3-207ENST00000478209 BRK1Q8WUW1 75 aa5.5□□□□□ -1.53
PDZRN3-207ENST00000478209 LCE4AQ5TA78 99 aa5.47□□□□□ -1.53
PDZRN3-207ENST00000478209 KRTAP4-9Q9BYQ8 210 aa5.47□□□□□ -1.53
PDZRN3-207ENST00000478209 LCE3CQ5T5A8 94 aa5.38□□□□□ -1.55
PDZRN3-207ENST00000478209 LCE1DQ5T752 114 aa5.38□□□□□ -1.55
PDZRN3-207ENST00000478209 LOC100996750A0A140TA64 210 aa5.37□□□□□ -1.55
PDZRN3-207ENST00000478209 KRTAP5-4Q6L8H1 288 aa5.37□□□□□ -1.55
PDZRN3-207ENST00000478209 KRTAP4-6Q9BYQ5 205 aa5.37□□□□□ -1.55
PDZRN3-207ENST00000478209 MT4P47944 62 aa5.36□□□□□ -1.55
PDZRN3-207ENST00000478209 KRTAP5-5Q701N2 237 aaPredicted RBP5.27□□□□□ -1.57
PDZRN3-207ENST00000478209 KRTAP4-12Q9BQ66 201 aa5.25□□□□□ -1.57
PDZRN3-207ENST00000478209 HMCN1Q96RW7 5635 aa5.21□□□□□ -1.58
PDZRN3-207ENST00000478209 PMAIP1Q13794 54 aa5.21□□□□□ -1.58
PDZRN3-207ENST00000478209 KRTAP12-4P60329 112 aa5.12□□□□□ -1.59
PDZRN3-207ENST00000478209 KTN1-AS1Q86SY8 53 aa5.11□□□□□ -1.59
PDZRN3-207ENST00000478209 KRTAP9-4Q9BYQ2 154 aa5.1□□□□□ -1.59
PDZRN3-207ENST00000478209 SPRR5A0A1B0GTR4 108 aa5.08□□□□□ -1.6
PDZRN3-207ENST00000478209 KRTAP9-9Q9BYP9 154 aa5.08□□□□□ -1.6
PDZRN3-207ENST00000478209 KRTAP20-2Q3LI61 65 aa5.07□□□□□ -1.6
PDZRN3-207ENST00000478209 GPR98Q8WXG9 6306 aa5.06□□□□□ -1.6
PDZRN3-207ENST00000478209 KRTAP9-6A8MVA2 160 aa5.03□□□□□ -1.6
PDZRN3-207ENST00000478209 SYNE1Q8NF91 8797 aaKnown RBP5.02□□□□□ -1.61
PDZRN3-207ENST00000478209 MT1AP04731 61 aa5.01□□□□□ -1.61
PDZRN3-207ENST00000478209 AHNAK2Q8IVF2 5795 aa4.97□□□□□ -1.61
PDZRN3-207ENST00000478209 KRTAP6-1Q3LI64 71 aa4.94□□□□□ -1.62
PDZRN3-207ENST00000478209 KRTAP5-3Q6L8H2 238 aa4.9□□□□□ -1.63
PDZRN3-207ENST00000478209 PRAC1Q96KF2 57 aa4.89□□□□□ -1.63
PDZRN3-207ENST00000478209 KRTAP5-10Q6L8G5 202 aa4.87□□□□□ -1.63
PDZRN3-207ENST00000478209 KRTAP5-2Q701N4 177 aa4.75□□□□□ -1.65
PDZRN3-207ENST00000478209 KRTAP6-2Q3LI66 62 aa4.68□□□□□ -1.66
PDZRN3-207ENST00000478209 KRTAP5-7Q6L8G8 165 aa4.66□□□□□ -1.66
PDZRN3-207ENST00000478209 MT3P25713 68 aa4.58□□□□□ -1.68
PDZRN3-207ENST00000478209 KRTAP4-11Q9BYQ6 195 aa4.57□□□□□ -1.68
PDZRN3-207ENST00000478209 KRTAP5-8O75690 187 aa4.4□□□□□ -1.71
PDZRN3-207ENST00000478209 NDUFAF8A1L188 74 aa4.35□□□□□ -1.71
PDZRN3-207ENST00000478209 OBSCNQ5VST9 7968 aa4.31□□□□□ -1.72
PDZRN3-207ENST00000478209 KRTAP5-1Q6L8H4 278 aa4.21□□□□□ -1.74
PDZRN3-207ENST00000478209 KRTAP4-2Q9BYR5 136 aa4.21□□□□□ -1.74
PDZRN3-207ENST00000478209 LUZP6Q538Z0 58 aa4.15□□□□□ -1.75
PDZRN3-207ENST00000478209 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
PDZRN3-207ENST00000478209 MUC5ACP98088 5654 aa4.06□□□□□ -1.76
PDZRN3-207ENST00000478209 MUC5BQ9HC84 5762 aaPredicted RBP4.03□□□□□ -1.76
PDZRN3-207ENST00000478209 AHNAKQ09666 5890 aaKnown RBP4.01□□□□□ -1.77
PDZRN3-207ENST00000478209 LCE3DQ9BYE3 92 aa3.93□□□□□ -1.78
PDZRN3-207ENST00000478209 LCE1BQ5T7P3 118 aa3.89□□□□□ -1.79
PDZRN3-207ENST00000478209 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
PDZRN3-207ENST00000478209 LCE1CQ5T751 118 aa3.83□□□□□ -1.8
PDZRN3-207ENST00000478209 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
PDZRN3-207ENST00000478209 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.51□□□□□ -1.85
PDZRN3-207ENST00000478209 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
PDZRN3-207ENST00000478209 INE1O15225 51 aa3.4□□□□□ -1.87
PDZRN3-207ENST00000478209 KRTAP21-2Q3LI59 83 aa3.24□□□□□ -1.89
PDZRN3-207ENST00000478209 PHGR1C9JFL3 82 aa2.97□□□□□ -1.93
PDZRN3-207ENST00000478209 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
PDZRN3-207ENST00000478209 PRM1P04553 51 aa2.93□□□□□ -1.94
PDZRN3-207ENST00000478209 MUC19Q7Z5P9 8384 aa2.65□□□□□ -1.98
PDZRN3-207ENST00000478209 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
PDZRN3-207ENST00000478209 MUC16Q8WXI7 14507 aa1.95□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 41.9 ms