RNA–Protein interactions for RNA: ENST00000477741.5

NELFCD-205, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-205ENST00000477741 KRTAP5-9P26371 169 aa5.21□□□□□ -1.58
NELFCD-205ENST00000477741 KRTAP6-3Q3LI67 103 aa5.17□□□□□ -1.58
NELFCD-205ENST00000477741 KRTAP9-7A8MTY7 169 aa5.15□□□□□ -1.59
NELFCD-205ENST00000477741 MT1LQ93083 61 aa5.11□□□□□ -1.59
NELFCD-205ENST00000477741 LUZP6Q538Z0 58 aa5.09□□□□□ -1.59
NELFCD-205ENST00000477741 LCE1AQ5T7P2 110 aa5.05□□□□□ -1.6
NELFCD-205ENST00000477741 KRTAP19-3Q7Z4W3 81 aa5.04□□□□□ -1.6
NELFCD-205ENST00000477741 KRTAP4-7Q9BYR0 210 aa5.03□□□□□ -1.6
NELFCD-205ENST00000477741 SPRR2EP22531 72 aa5.02□□□□□ -1.61
NELFCD-205ENST00000477741 SPRR2BP35325 72 aa5.02□□□□□ -1.61
NELFCD-205ENST00000477741 SPRR2AP35326 72 aa5.02□□□□□ -1.61
NELFCD-205ENST00000477741 LCE5AQ5TCM9 118 aa4.99□□□□□ -1.61
NELFCD-205ENST00000477741 NDUFAF8A1L188 74 aa4.97□□□□□ -1.61
NELFCD-205ENST00000477741 MT1GP13640 62 aa4.95□□□□□ -1.62
NELFCD-205ENST00000477741 NEBP20929 6669 aa4.94□□□□□ -1.62
NELFCD-205ENST00000477741 MT1MQ8N339 61 aa4.94□□□□□ -1.62
NELFCD-205ENST00000477741 DSTQ03001 7570 aaKnown RBP4.94□□□□□ -1.62
NELFCD-205ENST00000477741 SPRR5A0A1B0GTR4 108 aa4.93□□□□□ -1.62
NELFCD-205ENST00000477741 KRTAP4-3Q9BYR4 195 aa4.93□□□□□ -1.62
NELFCD-205ENST00000477741 LCE3CQ5T5A8 94 aa4.93□□□□□ -1.62
NELFCD-205ENST00000477741 SPRR2DP22532 72 aa4.82□□□□□ -1.64
NELFCD-205ENST00000477741 KRTAP19-4Q3LI73 84 aa4.78□□□□□ -1.64
NELFCD-205ENST00000477741 KRTAP9-6A8MVA2 160 aa4.75□□□□□ -1.65
NELFCD-205ENST00000477741 LOC100996750A0A140TA64 210 aa4.73□□□□□ -1.65
NELFCD-205ENST00000477741 LCE3BQ5TA77 95 aa4.65□□□□□ -1.66
NELFCD-205ENST00000477741 KRTAP2-3P0C7H8 128 aa4.54□□□□□ -1.68
NELFCD-205ENST00000477741 KRTAP2-4Q9BYR9 128 aa4.54□□□□□ -1.68
NELFCD-205ENST00000477741 KRTAP20-1Q3LI63 56 aa4.53□□□□□ -1.68
NELFCD-205ENST00000477741 KRTAP5-5Q701N2 237 aaPredicted RBP4.47□□□□□ -1.69
NELFCD-205ENST00000477741 KRTAP2-2Q9BYT5 123 aa4.44□□□□□ -1.7
NELFCD-205ENST00000477741 KRTAP2-1Q9BYU5 128 aa4.44□□□□□ -1.7
NELFCD-205ENST00000477741 SYNE1Q8NF91 8797 aaKnown RBP4.38□□□□□ -1.71
NELFCD-205ENST00000477741 KRTAP6-1Q3LI64 71 aa4.34□□□□□ -1.71
NELFCD-205ENST00000477741 KRTAP5-4Q6L8H1 288 aa4.31□□□□□ -1.72
NELFCD-205ENST00000477741 MT1AP04731 61 aa4.31□□□□□ -1.72
NELFCD-205ENST00000477741 KRTAP4-9Q9BYQ8 210 aa4.28□□□□□ -1.72
NELFCD-205ENST00000477741 MT4P47944 62 aa4.25□□□□□ -1.73
NELFCD-205ENST00000477741 LCE4AQ5TA78 99 aa4.22□□□□□ -1.73
NELFCD-205ENST00000477741 KRTAP4-6Q9BYQ5 205 aa4.22□□□□□ -1.73
NELFCD-205ENST00000477741 LCE1DQ5T752 114 aa4.18□□□□□ -1.74
NELFCD-205ENST00000477741 HMCN1Q96RW7 5635 aa4.18□□□□□ -1.74
NELFCD-205ENST00000477741 KRTAP12-4P60329 112 aa4.13□□□□□ -1.75
NELFCD-205ENST00000477741 INE1O15225 51 aa4.12□□□□□ -1.75
NELFCD-205ENST00000477741 KRTAP9-4Q9BYQ2 154 aa4.11□□□□□ -1.75
NELFCD-205ENST00000477741 KRTAP20-2Q3LI61 65 aa4.07□□□□□ -1.76
NELFCD-205ENST00000477741 KRTAP6-2Q3LI66 62 aa4.02□□□□□ -1.77
NELFCD-205ENST00000477741 KRTAP5-3Q6L8H2 238 aa3.93□□□□□ -1.78
NELFCD-205ENST00000477741 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.78
NELFCD-205ENST00000477741 MT3P25713 68 aa3.89□□□□□ -1.79
NELFCD-205ENST00000477741 KRTAP5-2Q701N4 177 aa3.88□□□□□ -1.79
NELFCD-205ENST00000477741 AHNAK2Q8IVF2 5795 aa3.73□□□□□ -1.81
NELFCD-205ENST00000477741 LCE3DQ9BYE3 92 aa3.66□□□□□ -1.82
NELFCD-205ENST00000477741 KRTAP4-12Q9BQ66 201 aa3.61□□□□□ -1.83
NELFCD-205ENST00000477741 KRTAP4-11Q9BYQ6 195 aa3.56□□□□□ -1.84
NELFCD-205ENST00000477741 KRTAP5-10Q6L8G5 202 aa3.55□□□□□ -1.84
NELFCD-205ENST00000477741 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
NELFCD-205ENST00000477741 GPR98Q8WXG9 6306 aa3.48□□□□□ -1.85
NELFCD-205ENST00000477741 KRTAP5-8O75690 187 aa3.45□□□□□ -1.86
NELFCD-205ENST00000477741 KRTAP5-1Q6L8H4 278 aa3.42□□□□□ -1.86
NELFCD-205ENST00000477741 LCE1EQ5T753 118 aa3.39□□□□□ -1.87
NELFCD-205ENST00000477741 KRTAP9-9Q9BYP9 154 aa3.39□□□□□ -1.87
NELFCD-205ENST00000477741 MUC5ACP98088 5654 aa3.33□□□□□ -1.88
NELFCD-205ENST00000477741 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
NELFCD-205ENST00000477741 KRTAP5-7Q6L8G8 165 aa3.26□□□□□ -1.89
NELFCD-205ENST00000477741 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
NELFCD-205ENST00000477741 PRM1P04553 51 aa3.18□□□□□ -1.9
NELFCD-205ENST00000477741 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
NELFCD-205ENST00000477741 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
NELFCD-205ENST00000477741 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
NELFCD-205ENST00000477741 KRTAP21-2Q3LI59 83 aa2.83□□□□□ -1.96
NELFCD-205ENST00000477741 AHNAKQ09666 5890 aaKnown RBP2.83□□□□□ -1.96
NELFCD-205ENST00000477741 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
NELFCD-205ENST00000477741 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
NELFCD-205ENST00000477741 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
NELFCD-205ENST00000477741 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
NELFCD-205ENST00000477741 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
NELFCD-205ENST00000477741 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
NELFCD-205ENST00000477741 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 17 ms