RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 SPEGQ15772 3267 aa0.26□□□□□ -2.37
VPS50-213ENST00000477572 SRCAPQ6ZRS2 3230 aa0.26□□□□□ -2.37
VPS50-213ENST00000477572 DEFB133Q30KQ1 61 aa0.26□□□□□ -2.37
VPS50-213ENST00000477572 FAT4Q6V0I7 4981 aa0.26□□□□□ -2.37
VPS50-213ENST00000477572 LOC400499M0QZD8 3231 aa0.26□□□□□ -2.37
VPS50-213ENST00000477572 STARD9Q9P2P6 4700 aa0.26□□□□□ -2.37
VPS50-213ENST00000477572 STAB2Q8WWQ8 2551 aa0.25□□□□□ -2.37
VPS50-213ENST00000477572 MT1AP04731 61 aa0.25□□□□□ -2.37
VPS50-213ENST00000477572 SPRR2BP35325 72 aa0.25□□□□□ -2.37
VPS50-213ENST00000477572 UNC80Q8N2C7 3258 aa0.25□□□□□ -2.37
VPS50-213ENST00000477572 LINC01556Q5JQF7 62 aa0.24□□□□□ -2.37
VPS50-213ENST00000477572 EYSQ5T1H1 3165 aa0.24□□□□□ -2.37
VPS50-213ENST00000477572 WDFY3Q8IZQ1 3526 aa0.24□□□□□ -2.37
VPS50-213ENST00000477572 GOLGB1Q14789 3259 aaKnown RBP0.23□□□□□ -2.37
VPS50-213ENST00000477572 MYO9AB2RTY4 2548 aa0.23□□□□□ -2.37
VPS50-213ENST00000477572 HERC1Q15751 4861 aa0.23□□□□□ -2.37
VPS50-213ENST00000477572 SPRR2AP35326 72 aa0.23□□□□□ -2.37
VPS50-213ENST00000477572 EP400Q96L91 3159 aa0.23□□□□□ -2.37
VPS50-213ENST00000477572 MUC5ACP98088 5654 aa0.23□□□□□ -2.37
VPS50-213ENST00000477572 VCANP13611 3396 aa0.23□□□□□ -2.37
VPS50-213ENST00000477572 BRCA2P51587 3418 aa0.22□□□□□ -2.37
VPS50-213ENST00000477572 PCNTO95613 3336 aa0.22□□□□□ -2.37
VPS50-213ENST00000477572 SPRR2EP22531 72 aa0.22□□□□□ -2.37
VPS50-213ENST00000477572 SPRR2FQ96RM1 72 aa0.22□□□□□ -2.37
VPS50-213ENST00000477572 DNHD1Q96M86 4753 aa0.22□□□□□ -2.37
VPS50-213ENST00000477572 LRP2P98164 4655 aa0.22□□□□□ -2.37
VPS50-213ENST00000477572 DNAH14Q0VDD8 3507 aa0.21□□□□□ -2.38
VPS50-213ENST00000477572 HMCN2Q8NDA2 5059 aa0.21□□□□□ -2.38
VPS50-213ENST00000477572 HTN3P15516 51 aa0.21□□□□□ -2.38
VPS50-213ENST00000477572 RPS29P62273 56 aaKnown RBP0.21□□□□□ -2.38
VPS50-213ENST00000477572 CENPFP49454 3210 aa0.2□□□□□ -2.38
VPS50-213ENST00000477572 KMT2DO14686 5537 aa0.19□□□□□ -2.38
VPS50-213ENST00000477572 Q9Y3F1 56 aa0.19□□□□□ -2.38
VPS50-213ENST00000477572 DEFB4AO15263 64 aa0.18□□□□□ -2.38
VPS50-213ENST00000477572 CD52P31358 61 aa0.18□□□□□ -2.38
VPS50-213ENST00000477572 MT1EP04732 61 aa0.17□□□□□ -2.38
VPS50-213ENST00000477572 SSPOA2VEC9 5147 aa0.17□□□□□ -2.38
VPS50-213ENST00000477572 GPR98Q8WXG9 6306 aa0.15□□□□□ -2.39
VPS50-213ENST00000477572 MT1HP80294 61 aa0.15□□□□□ -2.39
VPS50-213ENST00000477572 MT1LQ93083 61 aa0.15□□□□□ -2.39
VPS50-213ENST00000477572 KMT2CQ8NEZ4 4911 aaKnown RBP0.14□□□□□ -2.39
VPS50-213ENST00000477572 UBR4Q5T4S7 5183 aa0.13□□□□□ -2.39
VPS50-213ENST00000477572 HERC2O95714 4834 aa0.13□□□□□ -2.39
VPS50-213ENST00000477572 RYR1P21817 5038 aa0.13□□□□□ -2.39
VPS50-213ENST00000477572 PCLOQ9Y6V0 5065 aa0.13□□□□□ -2.39
VPS50-213ENST00000477572 MT1XP80297 61 aa0.13□□□□□ -2.39
VPS50-213ENST00000477572 SPRR2GQ9BYE4 73 aa0.13□□□□□ -2.39
VPS50-213ENST00000477572 CDH23Q9H251 3354 aa0.13□□□□□ -2.39
VPS50-213ENST00000477572 USH2AO75445 5202 aa0.13□□□□□ -2.39
VPS50-213ENST00000477572 BIRC6Q9NR09 4857 aa0.13□□□□□ -2.39
VPS50-213ENST00000477572 MT1GP13640 62 aa0.12□□□□□ -2.39
VPS50-213ENST00000477572 KRTAP6-1Q3LI64 71 aa0.11□□□□□ -2.39
VPS50-213ENST00000477572 KRTAP19-7Q3SYF9 63 aa0.11□□□□□ -2.39
VPS50-213ENST00000477572 FSIP2Q5CZC0 6907 aa0.11□□□□□ -2.39
VPS50-213ENST00000477572 HYDINQ4G0P3 5121 aa0.1□□□□□ -2.39
VPS50-213ENST00000477572 RYR3Q15413 4870 aa0.1□□□□□ -2.39
VPS50-213ENST00000477572 MUC2Q02817 5179 aa0.1□□□□□ -2.39
VPS50-213ENST00000477572 SYNE2Q8WXH0 6885 aaKnown RBP0.09□□□□□ -2.39
VPS50-213ENST00000477572 KRTAP19-8Q3LI54 63 aa0.09□□□□□ -2.4
VPS50-213ENST00000477572 MUC12Q9UKN1 5478 aa0.08□□□□□ -2.4
VPS50-213ENST00000477572 RNF213Q63HN8 5207 aa0.07□□□□□ -2.4
VPS50-213ENST00000477572 MT1BP07438 61 aa0.07□□□□□ -2.4
VPS50-213ENST00000477572 KRTAP19-2Q3LHN2 52 aa0.07□□□□□ -2.4
VPS50-213ENST00000477572 MT1MQ8N339 61 aa0.07□□□□□ -2.4
VPS50-213ENST00000477572 MACF1Q9UPN3 7388 aaKnown RBP0.06□□□□□ -2.4
VPS50-213ENST00000477572 MT2AP02795 61 aa0.06□□□□□ -2.4
VPS50-213ENST00000477572 EPPK1P58107 5090 aaKnown RBP0.04□□□□□ -2.4
VPS50-213ENST00000477572 KIAA1109Q2LD37 5005 aa0.02□□□□□ -2.41
VPS50-213ENST00000477572 MT1HL1P0DM35 61 aa0.02□□□□□ -2.41
VPS50-213ENST00000477572 RYR2Q92736 4967 aa0.02□□□□□ -2.41
VPS50-213ENST00000477572 KRTAP20-2Q3LI61 65 aa0.01□□□□□ -2.41
VPS50-213ENST00000477572 ABCA13Q86UQ4 5058 aa0.01□□□□□ -2.41
VPS50-213ENST00000477572 MT1FP04733 61 aa0□□□□□ -2.41
VPS50-213ENST00000477572 MT4P47944 62 aa-0.01□□□□□ -2.41
VPS50-213ENST00000477572 DSTQ03001 7570 aaKnown RBP-0.01□□□□□ -2.41
VPS50-213ENST00000477572 NEBP20929 6669 aa-0.14□□□□□ -2.43
VPS50-213ENST00000477572 KRTAP19-6Q3LI70 58 aa-0.15□□□□□ -2.43
VPS50-213ENST00000477572 KRTAP20-1Q3LI63 56 aa-0.16□□□□□ -2.44
Retrieved 78 of 20,778 RNA–protein pairs in 228.9 ms