RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 SPRR2DP22532 72 aa4.64□□□□□ -1.67
CLCNKA-205ENST00000477360 KRTAP19-7Q3SYF9 63 aa4.64□□□□□ -1.67
CLCNKA-205ENST00000477360 A0A0A0MQY5 61 aa4.63□□□□□ -1.67
CLCNKA-205ENST00000477360 KRTAP25-1Q3LHN0 102 aa4.61□□□□□ -1.67
CLCNKA-205ENST00000477360 MT1EP04732 61 aa4.59□□□□□ -1.67
CLCNKA-205ENST00000477360 KRTAP2-2Q9BYT5 123 aa4.59□□□□□ -1.67
CLCNKA-205ENST00000477360 KRTAP2-1Q9BYU5 128 aa4.59□□□□□ -1.67
CLCNKA-205ENST00000477360 LCE5AQ5TCM9 118 aa4.56□□□□□ -1.68
CLCNKA-205ENST00000477360 ROMO1P60602 79 aa4.55□□□□□ -1.68
CLCNKA-205ENST00000477360 KRTAP19-3Q7Z4W3 81 aa4.55□□□□□ -1.68
CLCNKA-205ENST00000477360 KRTAP19-5Q3LI72 72 aa4.52□□□□□ -1.69
CLCNKA-205ENST00000477360 LCE3BQ5TA77 95 aa4.52□□□□□ -1.69
CLCNKA-205ENST00000477360 LCE3AQ5TA76 89 aa4.51□□□□□ -1.69
CLCNKA-205ENST00000477360 MT1GP13640 62 aa4.49□□□□□ -1.69
CLCNKA-205ENST00000477360 PP632Q6XCG6 107 aa4.47□□□□□ -1.69
CLCNKA-205ENST00000477360 PRAC1Q96KF2 57 aa4.47□□□□□ -1.69
CLCNKA-205ENST00000477360 KRTAP19-4Q3LI73 84 aa4.4□□□□□ -1.71
CLCNKA-205ENST00000477360 MT1LQ93083 61 aa4.4□□□□□ -1.71
CLCNKA-205ENST00000477360 KRTAP12-3P60328 96 aa4.37□□□□□ -1.71
CLCNKA-205ENST00000477360 MT1MQ8N339 61 aa4.36□□□□□ -1.71
CLCNKA-205ENST00000477360 DSTQ03001 7570 aaKnown RBP4.34□□□□□ -1.71
CLCNKA-205ENST00000477360 KRTAP15-1Q3LI76 137 aa4.2□□□□□ -1.74
CLCNKA-205ENST00000477360 LCE4AQ5TA78 99 aa4.19□□□□□ -1.74
CLCNKA-205ENST00000477360 KRTAP5-4Q6L8H1 288 aa4.14□□□□□ -1.75
CLCNKA-205ENST00000477360 KRTAP4-3Q9BYR4 195 aa4.14□□□□□ -1.75
CLCNKA-205ENST00000477360 GPR98Q8WXG9 6306 aa4.12□□□□□ -1.75
CLCNKA-205ENST00000477360 KRTAP4-7Q9BYR0 210 aa4.1□□□□□ -1.75
CLCNKA-205ENST00000477360 KRTAP4-9Q9BYQ8 210 aa4.09□□□□□ -1.75
CLCNKA-205ENST00000477360 LCE1DQ5T752 114 aa4.08□□□□□ -1.76
CLCNKA-205ENST00000477360 LCE3CQ5T5A8 94 aa4.05□□□□□ -1.76
CLCNKA-205ENST00000477360 HMCN1Q96RW7 5635 aa4.03□□□□□ -1.76
CLCNKA-205ENST00000477360 KRTAP5-5Q701N2 237 aaPredicted RBP4.03□□□□□ -1.76
CLCNKA-205ENST00000477360 MT4P47944 62 aa4□□□□□ -1.77
CLCNKA-205ENST00000477360 LOC100996750A0A140TA64 210 aa3.99□□□□□ -1.77
CLCNKA-205ENST00000477360 KRTAP4-6Q9BYQ5 205 aa3.99□□□□□ -1.77
CLCNKA-205ENST00000477360 SPRR5A0A1B0GTR4 108 aa3.93□□□□□ -1.78
CLCNKA-205ENST00000477360 KRTAP4-12Q9BQ66 201 aa3.92□□□□□ -1.78
CLCNKA-205ENST00000477360 KRTAP12-4P60329 112 aa3.91□□□□□ -1.78
CLCNKA-205ENST00000477360 KRTAP9-4Q9BYQ2 154 aa3.87□□□□□ -1.79
CLCNKA-205ENST00000477360 KRTAP20-2Q3LI61 65 aa3.85□□□□□ -1.79
CLCNKA-205ENST00000477360 KRTAP9-9Q9BYP9 154 aa3.82□□□□□ -1.8
CLCNKA-205ENST00000477360 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
CLCNKA-205ENST00000477360 AHNAK2Q8IVF2 5795 aa3.8□□□□□ -1.8
CLCNKA-205ENST00000477360 MT1AP04731 61 aa3.78□□□□□ -1.8
CLCNKA-205ENST00000477360 KRTAP5-10Q6L8G5 202 aa3.76□□□□□ -1.81
CLCNKA-205ENST00000477360 KRTAP5-3Q6L8H2 238 aa3.75□□□□□ -1.81
CLCNKA-205ENST00000477360 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
CLCNKA-205ENST00000477360 KRTAP6-1Q3LI64 71 aa3.69□□□□□ -1.82
CLCNKA-205ENST00000477360 NDUFAF8A1L188 74 aa3.67□□□□□ -1.82
CLCNKA-205ENST00000477360 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.83
CLCNKA-205ENST00000477360 KRTAP5-7Q6L8G8 165 aa3.63□□□□□ -1.83
CLCNKA-205ENST00000477360 LUZP6Q538Z0 58 aa3.57□□□□□ -1.84
CLCNKA-205ENST00000477360 KRTAP6-2Q3LI66 62 aa3.5□□□□□ -1.85
CLCNKA-205ENST00000477360 KRTAP4-11Q9BYQ6 195 aa3.5□□□□□ -1.85
CLCNKA-205ENST00000477360 MT3P25713 68 aa3.47□□□□□ -1.85
CLCNKA-205ENST00000477360 KRTAP5-8O75690 187 aa3.37□□□□□ -1.87
CLCNKA-205ENST00000477360 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
CLCNKA-205ENST00000477360 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
CLCNKA-205ENST00000477360 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
CLCNKA-205ENST00000477360 AHNAKQ09666 5890 aaKnown RBP3.18□□□□□ -1.9
CLCNKA-205ENST00000477360 MUC5ACP98088 5654 aa3.17□□□□□ -1.9
CLCNKA-205ENST00000477360 MUC5BQ9HC84 5762 aaPredicted RBP3.16□□□□□ -1.9
CLCNKA-205ENST00000477360 KRTAP4-2Q9BYR5 136 aa3.14□□□□□ -1.91
CLCNKA-205ENST00000477360 INE1O15225 51 aa3.11□□□□□ -1.91
CLCNKA-205ENST00000477360 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
CLCNKA-205ENST00000477360 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
CLCNKA-205ENST00000477360 LCE1CQ5T751 118 aa2.96□□□□□ -1.94
CLCNKA-205ENST00000477360 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
CLCNKA-205ENST00000477360 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
CLCNKA-205ENST00000477360 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
CLCNKA-205ENST00000477360 KRTAP5-11Q6L8G4 156 aa2.66□□□□□ -1.98
CLCNKA-205ENST00000477360 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
CLCNKA-205ENST00000477360 PRM1P04553 51 aa2.32□□□□□ -2.04
CLCNKA-205ENST00000477360 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
CLCNKA-205ENST00000477360 KRTAP4-4Q9BYR3 166 aa2.12□□□□□ -2.07
CLCNKA-205ENST00000477360 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
CLCNKA-205ENST00000477360 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
CLCNKA-205ENST00000477360 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 73.8 ms