RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 SYNE2Q8WXH0 6885 aaKnown RBP3.68□□□□□ -1.82
PGK1-204ENST00000477335 ROMO1P60602 79 aa3.6□□□□□ -1.83
PGK1-204ENST00000477335 TNP1P09430 55 aa3.59□□□□□ -1.83
PGK1-204ENST00000477335 LCE3AQ5TA76 89 aa3.56□□□□□ -1.84
PGK1-204ENST00000477335 KRTAP25-1Q3LHN0 102 aa3.55□□□□□ -1.84
PGK1-204ENST00000477335 PRO0628Q9UI54 55 aa3.55□□□□□ -1.84
PGK1-204ENST00000477335 KRTAP8-1Q8IUC2 63 aa3.53□□□□□ -1.84
PGK1-204ENST00000477335 PMAIP1Q13794 54 aa3.51□□□□□ -1.85
PGK1-204ENST00000477335 KRTAP6-3Q3LI67 103 aa3.5□□□□□ -1.85
PGK1-204ENST00000477335 KRTAP5-9P26371 169 aa3.49□□□□□ -1.85
PGK1-204ENST00000477335 KRTAP19-7Q3SYF9 63 aa3.49□□□□□ -1.85
PGK1-204ENST00000477335 KRTAP19-5Q3LI72 72 aa3.48□□□□□ -1.85
PGK1-204ENST00000477335 MUC12Q9UKN1 5478 aa3.46□□□□□ -1.86
PGK1-204ENST00000477335 SPRR2FQ96RM1 72 aa3.45□□□□□ -1.86
PGK1-204ENST00000477335 NEBP20929 6669 aa3.45□□□□□ -1.86
PGK1-204ENST00000477335 MT1EP04732 61 aa3.43□□□□□ -1.86
PGK1-204ENST00000477335 MDN1Q9NU22 5596 aa3.42□□□□□ -1.86
PGK1-204ENST00000477335 MT3P25713 68 aa3.4□□□□□ -1.87
PGK1-204ENST00000477335 PRAC1Q96KF2 57 aa3.4□□□□□ -1.87
PGK1-204ENST00000477335 KRTAP12-3P60328 96 aa3.38□□□□□ -1.87
PGK1-204ENST00000477335 PP632Q6XCG6 107 aa3.35□□□□□ -1.87
PGK1-204ENST00000477335 SPRR2EP22531 72 aa3.33□□□□□ -1.88
PGK1-204ENST00000477335 SPRR2BP35325 72 aa3.33□□□□□ -1.88
PGK1-204ENST00000477335 SPRR2AP35326 72 aa3.33□□□□□ -1.88
PGK1-204ENST00000477335 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
PGK1-204ENST00000477335 MT1LQ93083 61 aa3.33□□□□□ -1.88
PGK1-204ENST00000477335 KTN1-AS1Q86SY8 53 aa3.32□□□□□ -1.88
PGK1-204ENST00000477335 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
PGK1-204ENST00000477335 KRTAP19-3Q7Z4W3 81 aa3.31□□□□□ -1.88
PGK1-204ENST00000477335 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
PGK1-204ENST00000477335 MT1MQ8N339 61 aa3.24□□□□□ -1.89
PGK1-204ENST00000477335 MT1GP13640 62 aa3.23□□□□□ -1.89
PGK1-204ENST00000477335 KRTAP4-3Q9BYR4 195 aa3.21□□□□□ -1.9
PGK1-204ENST00000477335 SPRR2DP22532 72 aa3.2□□□□□ -1.9
PGK1-204ENST00000477335 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.16□□□□□ -1.9
PGK1-204ENST00000477335 LCE3CQ5T5A8 94 aa3.15□□□□□ -1.91
PGK1-204ENST00000477335 KRTAP20-1Q3LI63 56 aa3.09□□□□□ -1.91
PGK1-204ENST00000477335 DSTQ03001 7570 aaKnown RBP3.08□□□□□ -1.92
PGK1-204ENST00000477335 KRTAP2-3P0C7H8 128 aa3.08□□□□□ -1.92
PGK1-204ENST00000477335 KRTAP2-4Q9BYR9 128 aa3.08□□□□□ -1.92
PGK1-204ENST00000477335 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
PGK1-204ENST00000477335 KRTAP9-6A8MVA2 160 aa3.05□□□□□ -1.92
PGK1-204ENST00000477335 KRTAP2-1Q9BYU5 128 aa3□□□□□ -1.93
PGK1-204ENST00000477335 SPRR5A0A1B0GTR4 108 aa2.98□□□□□ -1.93
PGK1-204ENST00000477335 KRTAP5-5Q701N2 237 aaPredicted RBP2.96□□□□□ -1.94
PGK1-204ENST00000477335 KRTAP5-4Q6L8H1 288 aa2.9□□□□□ -1.95
PGK1-204ENST00000477335 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
PGK1-204ENST00000477335 MT1AP04731 61 aa2.82□□□□□ -1.96
PGK1-204ENST00000477335 KRTAP6-1Q3LI64 71 aa2.82□□□□□ -1.96
PGK1-204ENST00000477335 SYNE1Q8NF91 8797 aaKnown RBP2.8□□□□□ -1.96
PGK1-204ENST00000477335 MT4P47944 62 aa2.8□□□□□ -1.96
PGK1-204ENST00000477335 KRTAP5-1Q6L8H4 278 aa2.8□□□□□ -1.96
PGK1-204ENST00000477335 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
PGK1-204ENST00000477335 KRTAP20-2Q3LI61 65 aa2.71□□□□□ -1.98
PGK1-204ENST00000477335 KRTAP12-4P60329 112 aa2.7□□□□□ -1.98
PGK1-204ENST00000477335 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
PGK1-204ENST00000477335 LUZP6Q538Z0 58 aa2.65□□□□□ -1.99
PGK1-204ENST00000477335 KRTAP6-2Q3LI66 62 aa2.61□□□□□ -1.99
PGK1-204ENST00000477335 AHNAK2Q8IVF2 5795 aa2.61□□□□□ -1.99
PGK1-204ENST00000477335 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
PGK1-204ENST00000477335 GPR98Q8WXG9 6306 aa2.5□□□□□ -2.01
PGK1-204ENST00000477335 OBSCNQ5VST9 7968 aa2.46□□□□□ -2.02
PGK1-204ENST00000477335 KRTAP5-10Q6L8G5 202 aa2.43□□□□□ -2.02
PGK1-204ENST00000477335 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.03
PGK1-204ENST00000477335 KRTAP5-8O75690 187 aa2.31□□□□□ -2.04
PGK1-204ENST00000477335 KRTAP5-7Q6L8G8 165 aa2.27□□□□□ -2.05
PGK1-204ENST00000477335 MUC5ACP98088 5654 aa2.26□□□□□ -2.05
PGK1-204ENST00000477335 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
PGK1-204ENST00000477335 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.07
PGK1-204ENST00000477335 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
PGK1-204ENST00000477335 AHNAKQ09666 5890 aaKnown RBP2.05□□□□□ -2.08
PGK1-204ENST00000477335 INE1O15225 51 aa2.04□□□□□ -2.08
PGK1-204ENST00000477335 PRM1P04553 51 aa1.89□□□□□ -2.11
PGK1-204ENST00000477335 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
PGK1-204ENST00000477335 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
PGK1-204ENST00000477335 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
PGK1-204ENST00000477335 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
PGK1-204ENST00000477335 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 98.9 ms