RNA–Protein interactions for RNA: ENST00000477240.1

ARPC1A-205, Transcript of actin related protein 2/3 complex subunit 1A, humanhuman

TSL 2

Gene ARPC1A, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1A-205ENST00000477240 KRTAP20-1Q3LI63 56 aa3.75□□□□□ -1.81
ARPC1A-205ENST00000477240 KRTAP6-3Q3LI67 103 aa3.74□□□□□ -1.81
ARPC1A-205ENST00000477240 KRTAP25-1Q3LHN0 102 aa3.73□□□□□ -1.81
ARPC1A-205ENST00000477240 LINC01554Q52M75 96 aa3.73□□□□□ -1.81
ARPC1A-205ENST00000477240 MUC12Q9UKN1 5478 aa3.72□□□□□ -1.81
ARPC1A-205ENST00000477240 NDUFAF8A1L188 74 aa3.69□□□□□ -1.82
ARPC1A-205ENST00000477240 KRTAP10-5P60370 271 aa3.69□□□□□ -1.82
ARPC1A-205ENST00000477240 MT3P25713 68 aa3.64□□□□□ -1.83
ARPC1A-205ENST00000477240 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
ARPC1A-205ENST00000477240 CAMK2N1Q7Z7J9 78 aa3.63□□□□□ -1.83
ARPC1A-205ENST00000477240 C10orf95Q9H7T3 257 aa3.61□□□□□ -1.83
ARPC1A-205ENST00000477240 PLAC4Q8WY50 150 aa3.6□□□□□ -1.83
ARPC1A-205ENST00000477240 GPR98Q8WXG9 6306 aa3.59□□□□□ -1.84
ARPC1A-205ENST00000477240 KRTAP5-9P26371 169 aa3.57□□□□□ -1.84
ARPC1A-205ENST00000477240 PRO2289Q9P1D8 64 aa3.57□□□□□ -1.84
ARPC1A-205ENST00000477240 PP632Q6XCG6 107 aa3.56□□□□□ -1.84
ARPC1A-205ENST00000477240 KMT2DO14686 5537 aa3.55□□□□□ -1.84
ARPC1A-205ENST00000477240 MT1XP80297 61 aa3.54□□□□□ -1.84
ARPC1A-205ENST00000477240 TNP1P09430 55 aa3.52□□□□□ -1.85
ARPC1A-205ENST00000477240 MDN1Q9NU22 5596 aa3.49□□□□□ -1.85
ARPC1A-205ENST00000477240 KRTAP2-3P0C7H8 128 aa3.45□□□□□ -1.86
ARPC1A-205ENST00000477240 SPRR2FQ96RM1 72 aa3.45□□□□□ -1.86
ARPC1A-205ENST00000477240 KRTAP2-4Q9BYR9 128 aa3.45□□□□□ -1.86
ARPC1A-205ENST00000477240 KRTAP8-1Q8IUC2 63 aa3.44□□□□□ -1.86
ARPC1A-205ENST00000477240 SPRR2EP22531 72 aa3.41□□□□□ -1.86
ARPC1A-205ENST00000477240 SPRR2BP35325 72 aa3.41□□□□□ -1.86
ARPC1A-205ENST00000477240 SPRR2AP35326 72 aa3.41□□□□□ -1.86
ARPC1A-205ENST00000477240 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
ARPC1A-205ENST00000477240 KRTAP10-12P60413 245 aa3.37□□□□□ -1.87
ARPC1A-205ENST00000477240 KRTAP2-1Q9BYU5 128 aa3.31□□□□□ -1.88
ARPC1A-205ENST00000477240 SPRR2DP22532 72 aa3.3□□□□□ -1.88
ARPC1A-205ENST00000477240 LCE3AQ5TA76 89 aa3.29□□□□□ -1.88
ARPC1A-205ENST00000477240 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
ARPC1A-205ENST00000477240 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
ARPC1A-205ENST00000477240 KRTAP5-4Q6L8H1 288 aa3.23□□□□□ -1.89
ARPC1A-205ENST00000477240 SPRR5A0A1B0GTR4 108 aa3.19□□□□□ -1.9
ARPC1A-205ENST00000477240 KRTAP12-3P60328 96 aa3.18□□□□□ -1.9
ARPC1A-205ENST00000477240 KRTAP9-6A8MVA2 160 aa3.16□□□□□ -1.9
ARPC1A-205ENST00000477240 KRTAP19-7Q3SYF9 63 aa3.16□□□□□ -1.9
ARPC1A-205ENST00000477240 MT1EP04732 61 aa3.14□□□□□ -1.91
ARPC1A-205ENST00000477240 LUZP6Q538Z0 58 aa3.13□□□□□ -1.91
ARPC1A-205ENST00000477240 KRTAP19-3Q7Z4W3 81 aa3.12□□□□□ -1.91
ARPC1A-205ENST00000477240 KRTAP19-5Q3LI72 72 aa3.08□□□□□ -1.92
ARPC1A-205ENST00000477240 DSTQ03001 7570 aaKnown RBP3.08□□□□□ -1.92
ARPC1A-205ENST00000477240 AHNAK2Q8IVF2 5795 aa3.07□□□□□ -1.92
ARPC1A-205ENST00000477240 MT1GP13640 62 aa3.05□□□□□ -1.92
ARPC1A-205ENST00000477240 LCE3CQ5T5A8 94 aa3.02□□□□□ -1.93
ARPC1A-205ENST00000477240 HMCN1Q96RW7 5635 aa3.01□□□□□ -1.93
ARPC1A-205ENST00000477240 MT1LQ93083 61 aa3□□□□□ -1.93
ARPC1A-205ENST00000477240 OBSCNQ5VST9 7968 aa3□□□□□ -1.93
ARPC1A-205ENST00000477240 MT1MQ8N339 61 aa2.98□□□□□ -1.93
ARPC1A-205ENST00000477240 KRTAP5-10Q6L8G5 202 aa2.95□□□□□ -1.94
ARPC1A-205ENST00000477240 KRTAP4-3Q9BYR4 195 aa2.91□□□□□ -1.94
ARPC1A-205ENST00000477240 KRTAP5-7Q6L8G8 165 aa2.89□□□□□ -1.95
ARPC1A-205ENST00000477240 MT4P47944 62 aa2.88□□□□□ -1.95
ARPC1A-205ENST00000477240 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
ARPC1A-205ENST00000477240 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
ARPC1A-205ENST00000477240 AHNAKQ09666 5890 aaKnown RBP2.72□□□□□ -1.97
ARPC1A-205ENST00000477240 KRTAP20-2Q3LI61 65 aa2.69□□□□□ -1.98
ARPC1A-205ENST00000477240 KRTAP5-2Q701N4 177 aa2.69□□□□□ -1.98
ARPC1A-205ENST00000477240 KRTAP12-4P60329 112 aa2.68□□□□□ -1.98
ARPC1A-205ENST00000477240 INE1O15225 51 aa2.66□□□□□ -1.98
ARPC1A-205ENST00000477240 SYNE1Q8NF91 8797 aaKnown RBP2.62□□□□□ -1.99
ARPC1A-205ENST00000477240 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
ARPC1A-205ENST00000477240 MUC5ACP98088 5654 aa2.6□□□□□ -1.99
ARPC1A-205ENST00000477240 MT1AP04731 61 aa2.55□□□□□ -2
ARPC1A-205ENST00000477240 KRTAP6-1Q3LI64 71 aa2.53□□□□□ -2
ARPC1A-205ENST00000477240 KRTAP6-2Q3LI66 62 aa2.42□□□□□ -2.02
ARPC1A-205ENST00000477240 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
ARPC1A-205ENST00000477240 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
ARPC1A-205ENST00000477240 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
ARPC1A-205ENST00000477240 LCE3DQ9BYE3 92 aa2.35□□□□□ -2.03
ARPC1A-205ENST00000477240 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
ARPC1A-205ENST00000477240 PRM1P04553 51 aa1.97□□□□□ -2.09
ARPC1A-205ENST00000477240 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
ARPC1A-205ENST00000477240 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
ARPC1A-205ENST00000477240 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
ARPC1A-205ENST00000477240 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 70.7 ms