RNA–Protein interactions for RNA: ENST00000476931.1

RPN1-202, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 526 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-202ENST00000476931 KRTAP2-4Q9BYR9 128 aa6.16□□□□□ -1.42
RPN1-202ENST00000476931 KRTAP19-3Q7Z4W3 81 aa6.15□□□□□ -1.42
RPN1-202ENST00000476931 LCE5AQ5TCM9 118 aa6.12□□□□□ -1.43
RPN1-202ENST00000476931 MT1GP13640 62 aa6.09□□□□□ -1.43
RPN1-202ENST00000476931 KRTAP12-3P60328 96 aa6.09□□□□□ -1.43
RPN1-202ENST00000476931 BRK1Q8WUW1 75 aa6.07□□□□□ -1.44
RPN1-202ENST00000476931 PP632Q6XCG6 107 aa6.06□□□□□ -1.44
RPN1-202ENST00000476931 MT1LQ93083 61 aa6.03□□□□□ -1.44
RPN1-202ENST00000476931 KRTAP2-2Q9BYT5 123 aa5.99□□□□□ -1.45
RPN1-202ENST00000476931 KRTAP2-1Q9BYU5 128 aa5.99□□□□□ -1.45
RPN1-202ENST00000476931 LCE3BQ5TA77 95 aa5.97□□□□□ -1.45
RPN1-202ENST00000476931 KRTAP19-4Q3LI73 84 aa5.94□□□□□ -1.46
RPN1-202ENST00000476931 MT1MQ8N339 61 aa5.92□□□□□ -1.46
RPN1-202ENST00000476931 KRTAP15-1Q3LI76 137 aa5.84□□□□□ -1.47
RPN1-202ENST00000476931 DSTQ03001 7570 aaKnown RBP5.78□□□□□ -1.48
RPN1-202ENST00000476931 PMAIP1Q13794 54 aa5.77□□□□□ -1.49
RPN1-202ENST00000476931 KRTAP4-7Q9BYR0 210 aa5.69□□□□□ -1.5
RPN1-202ENST00000476931 KRTAP4-3Q9BYR4 195 aa5.69□□□□□ -1.5
RPN1-202ENST00000476931 PRO0628Q9UI54 55 aa5.66□□□□□ -1.5
RPN1-202ENST00000476931 LCE3CQ5T5A8 94 aa5.65□□□□□ -1.5
RPN1-202ENST00000476931 LCE4AQ5TA78 99 aa5.53□□□□□ -1.52
RPN1-202ENST00000476931 KRTAP5-4Q6L8H1 288 aa5.46□□□□□ -1.54
RPN1-202ENST00000476931 GPR98Q8WXG9 6306 aa5.41□□□□□ -1.54
RPN1-202ENST00000476931 KRTAP4-9Q9BYQ8 210 aa5.4□□□□□ -1.54
RPN1-202ENST00000476931 KRTAP5-5Q701N2 237 aaPredicted RBP5.39□□□□□ -1.55
RPN1-202ENST00000476931 LOC100996750A0A140TA64 210 aa5.37□□□□□ -1.55
RPN1-202ENST00000476931 LCE1DQ5T752 114 aa5.36□□□□□ -1.55
RPN1-202ENST00000476931 PRAC1Q96KF2 57 aa5.36□□□□□ -1.55
RPN1-202ENST00000476931 MT4P47944 62 aa5.33□□□□□ -1.56
RPN1-202ENST00000476931 KTN1-AS1Q86SY8 53 aa5.31□□□□□ -1.56
RPN1-202ENST00000476931 KRTAP12-4P60329 112 aa5.24□□□□□ -1.57
RPN1-202ENST00000476931 KRTAP9-6A8MVA2 160 aa5.23□□□□□ -1.57
RPN1-202ENST00000476931 HMCN1Q96RW7 5635 aa5.23□□□□□ -1.57
RPN1-202ENST00000476931 KRTAP4-6Q9BYQ5 205 aa5.22□□□□□ -1.57
RPN1-202ENST00000476931 SPRR5A0A1B0GTR4 108 aa5.19□□□□□ -1.58
RPN1-202ENST00000476931 MT1AP04731 61 aa5.16□□□□□ -1.58
RPN1-202ENST00000476931 KRTAP20-2Q3LI61 65 aa5.11□□□□□ -1.59
RPN1-202ENST00000476931 SYNE1Q8NF91 8797 aaKnown RBP5.08□□□□□ -1.6
RPN1-202ENST00000476931 KRTAP6-1Q3LI64 71 aa5.06□□□□□ -1.6
RPN1-202ENST00000476931 SVIPQ8NHG7 77 aa5.01□□□□□ -1.61
RPN1-202ENST00000476931 KRTAP9-4Q9BYQ2 154 aa4.97□□□□□ -1.61
RPN1-202ENST00000476931 KRTAP5-3Q6L8H2 238 aa4.95□□□□□ -1.62
RPN1-202ENST00000476931 AHNAK2Q8IVF2 5795 aa4.87□□□□□ -1.63
RPN1-202ENST00000476931 KRTAP5-2Q701N4 177 aa4.84□□□□□ -1.63
RPN1-202ENST00000476931 KRTAP5-10Q6L8G5 202 aa4.79□□□□□ -1.64
RPN1-202ENST00000476931 KRTAP6-2Q3LI66 62 aa4.78□□□□□ -1.64
RPN1-202ENST00000476931 MT3P25713 68 aa4.75□□□□□ -1.65
RPN1-202ENST00000476931 LUZP6Q538Z0 58 aa4.63□□□□□ -1.67
RPN1-202ENST00000476931 KRTAP5-7Q6L8G8 165 aa4.63□□□□□ -1.67
RPN1-202ENST00000476931 KRTAP4-11Q9BYQ6 195 aa4.59□□□□□ -1.67
RPN1-202ENST00000476931 KRTAP5-8O75690 187 aa4.41□□□□□ -1.7
RPN1-202ENST00000476931 OBSCNQ5VST9 7968 aa4.38□□□□□ -1.71
RPN1-202ENST00000476931 LCE1EQ5T753 118 aa4.29□□□□□ -1.72
RPN1-202ENST00000476931 KRTAP5-1Q6L8H4 278 aa4.26□□□□□ -1.73
RPN1-202ENST00000476931 LCE3DQ9BYE3 92 aa4.17□□□□□ -1.74
RPN1-202ENST00000476931 KRTAP9-9Q9BYP9 154 aa4.16□□□□□ -1.74
RPN1-202ENST00000476931 H3BS24 57 aa4.15□□□□□ -1.75
RPN1-202ENST00000476931 AHNAKQ09666 5890 aaKnown RBP4.15□□□□□ -1.75
RPN1-202ENST00000476931 MUC5ACP98088 5654 aa4.07□□□□□ -1.76
RPN1-202ENST00000476931 LCE3EQ5T5B0 92 aa3.99□□□□□ -1.77
RPN1-202ENST00000476931 MUC5BQ9HC84 5762 aaPredicted RBP3.98□□□□□ -1.77
RPN1-202ENST00000476931 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
RPN1-202ENST00000476931 LCE1CQ5T751 118 aa3.97□□□□□ -1.77
RPN1-202ENST00000476931 LCE1BQ5T7P3 118 aa3.97□□□□□ -1.77
RPN1-202ENST00000476931 KRTAP4-2Q9BYR5 136 aa3.93□□□□□ -1.78
RPN1-202ENST00000476931 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.66□□□□□ -1.82
RPN1-202ENST00000476931 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
RPN1-202ENST00000476931 A0A0A0MQY5 61 aa3.42□□□□□ -1.86
RPN1-202ENST00000476931 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
RPN1-202ENST00000476931 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.87
RPN1-202ENST00000476931 INE1O15225 51 aa3.35□□□□□ -1.87
RPN1-202ENST00000476931 KRTAP21-2Q3LI59 83 aa3.34□□□□□ -1.87
RPN1-202ENST00000476931 PRM1P04553 51 aa3.14□□□□□ -1.91
RPN1-202ENST00000476931 PHGR1C9JFL3 82 aa3.04□□□□□ -1.92
RPN1-202ENST00000476931 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
RPN1-202ENST00000476931 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
RPN1-202ENST00000476931 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
RPN1-202ENST00000476931 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 171.8 ms