RNA–Protein interactions for RNA: ENST00000476806.5

RBM39-230, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-230ENST00000476806 CAMK2N1Q7Z7J9 78 aa3.51□□□□□ -1.85
RBM39-230ENST00000476806 PLAC4Q8WY50 150 aa3.51□□□□□ -1.85
RBM39-230ENST00000476806 A0A0A0MQY5 61 aa3.5□□□□□ -1.85
RBM39-230ENST00000476806 MACF1Q9UPN3 7388 aaKnown RBP3.5□□□□□ -1.85
RBM39-230ENST00000476806 KRTAP12-2P59991 146 aa3.47□□□□□ -1.85
RBM39-230ENST00000476806 MT2AP02795 61 aa3.46□□□□□ -1.86
RBM39-230ENST00000476806 KRTAP4-3Q9BYR4 195 aa3.46□□□□□ -1.86
RBM39-230ENST00000476806 MT1FP04733 61 aa3.42□□□□□ -1.86
RBM39-230ENST00000476806 KRTAP25-1Q3LHN0 102 aa3.42□□□□□ -1.86
RBM39-230ENST00000476806 PRO2289Q9P1D8 64 aa3.41□□□□□ -1.86
RBM39-230ENST00000476806 KRTAP19-8Q3LI54 63 aa3.4□□□□□ -1.87
RBM39-230ENST00000476806 KRTAP5-2Q701N4 177 aa3.4□□□□□ -1.87
RBM39-230ENST00000476806 PP632Q6XCG6 107 aa3.39□□□□□ -1.87
RBM39-230ENST00000476806 TNP1P09430 55 aa3.37□□□□□ -1.87
RBM39-230ENST00000476806 NEBP20929 6669 aa3.37□□□□□ -1.87
RBM39-230ENST00000476806 MUC12Q9UKN1 5478 aa3.37□□□□□ -1.87
RBM39-230ENST00000476806 KRTAP10-12P60413 245 aa3.35□□□□□ -1.87
RBM39-230ENST00000476806 KRTAP6-3Q3LI67 103 aa3.34□□□□□ -1.87
RBM39-230ENST00000476806 KRTAP20-1Q3LI63 56 aa3.28□□□□□ -1.88
RBM39-230ENST00000476806 PRAC1Q96KF2 57 aa3.28□□□□□ -1.88
RBM39-230ENST00000476806 C10orf95Q9H7T3 257 aa3.28□□□□□ -1.88
RBM39-230ENST00000476806 MT1BP07438 61 aa3.26□□□□□ -1.89
RBM39-230ENST00000476806 MDN1Q9NU22 5596 aa3.22□□□□□ -1.89
RBM39-230ENST00000476806 KRTAP19-6Q3LI70 58 aa3.22□□□□□ -1.89
RBM39-230ENST00000476806 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
RBM39-230ENST00000476806 KMT2DO14686 5537 aa3.2□□□□□ -1.9
RBM39-230ENST00000476806 MT1XP80297 61 aa3.17□□□□□ -1.9
RBM39-230ENST00000476806 KRTAP2-3P0C7H8 128 aa3.09□□□□□ -1.91
RBM39-230ENST00000476806 KRTAP2-4Q9BYR9 128 aa3.09□□□□□ -1.91
RBM39-230ENST00000476806 KRTAP8-1Q8IUC2 63 aa3.07□□□□□ -1.92
RBM39-230ENST00000476806 LCE3AQ5TA76 89 aa3.04□□□□□ -1.92
RBM39-230ENST00000476806 GPR98Q8WXG9 6306 aa3.03□□□□□ -1.92
RBM39-230ENST00000476806 LCE3CQ5T5A8 94 aa3.02□□□□□ -1.93
RBM39-230ENST00000476806 KRTAP12-3P60328 96 aa3□□□□□ -1.93
RBM39-230ENST00000476806 LUZP6Q538Z0 58 aa2.97□□□□□ -1.93
RBM39-230ENST00000476806 KRTAP2-1Q9BYU5 128 aa2.96□□□□□ -1.94
RBM39-230ENST00000476806 NDUFAF8A1L188 74 aa2.93□□□□□ -1.94
RBM39-230ENST00000476806 SPRR2EP22531 72 aa2.87□□□□□ -1.95
RBM39-230ENST00000476806 SPRR2BP35325 72 aa2.87□□□□□ -1.95
RBM39-230ENST00000476806 SPRR2AP35326 72 aa2.87□□□□□ -1.95
RBM39-230ENST00000476806 KRTAP19-5Q3LI72 72 aa2.87□□□□□ -1.95
RBM39-230ENST00000476806 SPRR5A0A1B0GTR4 108 aa2.85□□□□□ -1.95
RBM39-230ENST00000476806 KRTAP5-8O75690 187 aa2.85□□□□□ -1.95
RBM39-230ENST00000476806 KRTAP19-7Q3SYF9 63 aa2.82□□□□□ -1.96
RBM39-230ENST00000476806 KRTAP5-5Q701N2 237 aaPredicted RBP2.82□□□□□ -1.96
RBM39-230ENST00000476806 MT1EP04732 61 aa2.81□□□□□ -1.96
RBM39-230ENST00000476806 SPRR2FQ96RM1 72 aa2.81□□□□□ -1.96
RBM39-230ENST00000476806 SPRR2DP22532 72 aa2.77□□□□□ -1.97
RBM39-230ENST00000476806 DSTQ03001 7570 aaKnown RBP2.76□□□□□ -1.97
RBM39-230ENST00000476806 MT1GP13640 62 aa2.76□□□□□ -1.97
RBM39-230ENST00000476806 MT1LQ93083 61 aa2.76□□□□□ -1.97
RBM39-230ENST00000476806 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
RBM39-230ENST00000476806 KRTAP19-3Q7Z4W3 81 aa2.74□□□□□ -1.97
RBM39-230ENST00000476806 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
RBM39-230ENST00000476806 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
RBM39-230ENST00000476806 HMCN1Q96RW7 5635 aa2.68□□□□□ -1.98
RBM39-230ENST00000476806 AHNAK2Q8IVF2 5795 aa2.67□□□□□ -1.98
RBM39-230ENST00000476806 MT1MQ8N339 61 aa2.64□□□□□ -1.99
RBM39-230ENST00000476806 KRTAP5-10Q6L8G5 202 aa2.63□□□□□ -1.99
RBM39-230ENST00000476806 KRTAP5-7Q6L8G8 165 aa2.56□□□□□ -2
RBM39-230ENST00000476806 MT4P47944 62 aa2.49□□□□□ -2.01
RBM39-230ENST00000476806 INE1O15225 51 aa2.43□□□□□ -2.02
RBM39-230ENST00000476806 MT1AP04731 61 aa2.4□□□□□ -2.03
RBM39-230ENST00000476806 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
RBM39-230ENST00000476806 KRTAP12-4P60329 112 aa2.33□□□□□ -2.04
RBM39-230ENST00000476806 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
RBM39-230ENST00000476806 MUC5BQ9HC84 5762 aaPredicted RBP2.28□□□□□ -2.05
RBM39-230ENST00000476806 MUC5ACP98088 5654 aa2.27□□□□□ -2.05
RBM39-230ENST00000476806 KRTAP6-1Q3LI64 71 aa2.26□□□□□ -2.05
RBM39-230ENST00000476806 KRTAP20-2Q3LI61 65 aa2.23□□□□□ -2.05
RBM39-230ENST00000476806 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
RBM39-230ENST00000476806 SYNE1Q8NF91 8797 aaKnown RBP2.12□□□□□ -2.07
RBM39-230ENST00000476806 KRTAP6-2Q3LI66 62 aa2.1□□□□□ -2.07
RBM39-230ENST00000476806 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
RBM39-230ENST00000476806 PRM1P04553 51 aa1.77□□□□□ -2.13
RBM39-230ENST00000476806 PHGR1C9JFL3 82 aa1.53□□□□□ -2.16
RBM39-230ENST00000476806 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
RBM39-230ENST00000476806 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 12.9 ms