RNA–Protein interactions for RNA: ENST00000476743.5

MSL3-213, Transcript of MSL complex subunit 3, humanhuman

TSL 4

Gene MSL3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-213ENST00000476743 KRTAP19-3Q7Z4W3 81 aa5.06□□□□□ -1.6
MSL3-213ENST00000476743 KRTAP19-5Q3LI72 72 aa5.03□□□□□ -1.6
MSL3-213ENST00000476743 C10orf95Q9H7T3 257 aa5.02□□□□□ -1.61
MSL3-213ENST00000476743 TNP1P09430 55 aa4.97□□□□□ -1.61
MSL3-213ENST00000476743 DSTQ03001 7570 aaKnown RBP4.97□□□□□ -1.61
MSL3-213ENST00000476743 UQCR11O14957 56 aa4.96□□□□□ -1.62
MSL3-213ENST00000476743 MT1GP13640 62 aa4.95□□□□□ -1.62
MSL3-213ENST00000476743 LCE3AQ5TA76 89 aa4.94□□□□□ -1.62
MSL3-213ENST00000476743 MT1LQ93083 61 aa4.9□□□□□ -1.63
MSL3-213ENST00000476743 PP632Q6XCG6 107 aa4.89□□□□□ -1.63
MSL3-213ENST00000476743 MT1MQ8N339 61 aa4.87□□□□□ -1.63
MSL3-213ENST00000476743 MIR22HGQ0VDD5 57 aa4.84□□□□□ -1.63
MSL3-213ENST00000476743 V9GYY9 64 aa4.82□□□□□ -1.64
MSL3-213ENST00000476743 Q1T7F1 81 aa4.8□□□□□ -1.64
MSL3-213ENST00000476743 PSPHP1O15172 72 aa4.76□□□□□ -1.65
MSL3-213ENST00000476743 KRTAP12-3P60328 96 aa4.76□□□□□ -1.65
MSL3-213ENST00000476743 KRTAP25-1Q3LHN0 102 aa4.74□□□□□ -1.65
MSL3-213ENST00000476743 K7ERS5 55 aa4.72□□□□□ -1.65
MSL3-213ENST00000476743 KRTAP4-3Q9BYR4 195 aa4.72□□□□□ -1.65
MSL3-213ENST00000476743 HMCN1Q96RW7 5635 aa4.69□□□□□ -1.66
MSL3-213ENST00000476743 GPR98Q8WXG9 6306 aa4.67□□□□□ -1.66
MSL3-213ENST00000476743 KRTAP19-4Q3LI73 84 aa4.65□□□□□ -1.67
MSL3-213ENST00000476743 KRTAP5-4Q6L8H1 288 aa4.64□□□□□ -1.67
MSL3-213ENST00000476743 KRTAP23-1A1A580 65 aa4.61□□□□□ -1.67
MSL3-213ENST00000476743 RPS28P62857 69 aaKnown RBP4.6□□□□□ -1.67
MSL3-213ENST00000476743 A6NED7 52 aa4.59□□□□□ -1.67
MSL3-213ENST00000476743 MT4P47944 62 aa4.57□□□□□ -1.68
MSL3-213ENST00000476743 AHNAK2Q8IVF2 5795 aa4.52□□□□□ -1.69
MSL3-213ENST00000476743 PCP4P48539 62 aa4.51□□□□□ -1.69
MSL3-213ENST00000476743 KRTAP5-5Q701N2 237 aaPredicted RBP4.49□□□□□ -1.69
MSL3-213ENST00000476743 CDC42SE1Q9NRR8 79 aa4.49□□□□□ -1.69
MSL3-213ENST00000476743 KRTAP15-1Q3LI76 137 aa4.47□□□□□ -1.69
MSL3-213ENST00000476743 ROMO1P60602 79 aa4.43□□□□□ -1.7
MSL3-213ENST00000476743 LCE3CQ5T5A8 94 aa4.39□□□□□ -1.71
MSL3-213ENST00000476743 SPRR5A0A1B0GTR4 108 aa4.36□□□□□ -1.71
MSL3-213ENST00000476743 KRTAP20-2Q3LI61 65 aa4.35□□□□□ -1.71
MSL3-213ENST00000476743 SYNE1Q8NF91 8797 aaKnown RBP4.34□□□□□ -1.71
MSL3-213ENST00000476743 H3BS24 57 aa4.33□□□□□ -1.72
MSL3-213ENST00000476743 KRTAP5-10Q6L8G5 202 aa4.32□□□□□ -1.72
MSL3-213ENST00000476743 KRTAP12-4P60329 112 aa4.31□□□□□ -1.72
MSL3-213ENST00000476743 MT1AP04731 61 aa4.17□□□□□ -1.74
MSL3-213ENST00000476743 KRTAP9-6A8MVA2 160 aa4.16□□□□□ -1.74
MSL3-213ENST00000476743 KRTAP5-7Q6L8G8 165 aa4.15□□□□□ -1.75
MSL3-213ENST00000476743 KRTAP6-1Q3LI64 71 aa4.14□□□□□ -1.75
MSL3-213ENST00000476743 KRTAP5-2Q701N4 177 aa4.08□□□□□ -1.76
MSL3-213ENST00000476743 BRK1Q8WUW1 75 aa3.97□□□□□ -1.77
MSL3-213ENST00000476743 KRTAP6-2Q3LI66 62 aa3.93□□□□□ -1.78
MSL3-213ENST00000476743 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.91□□□□□ -1.78
MSL3-213ENST00000476743 KRTAP5-8O75690 187 aa3.83□□□□□ -1.8
MSL3-213ENST00000476743 MT3P25713 68 aa3.8□□□□□ -1.8
MSL3-213ENST00000476743 OBSCNQ5VST9 7968 aa3.78□□□□□ -1.8
MSL3-213ENST00000476743 PMAIP1Q13794 54 aa3.74□□□□□ -1.81
MSL3-213ENST00000476743 AHNAKQ09666 5890 aaKnown RBP3.73□□□□□ -1.81
MSL3-213ENST00000476743 MUC5BQ9HC84 5762 aaPredicted RBP3.72□□□□□ -1.81
MSL3-213ENST00000476743 MUC5ACP98088 5654 aa3.69□□□□□ -1.82
MSL3-213ENST00000476743 KRTAP5-11Q6L8G4 156 aa3.66□□□□□ -1.82
MSL3-213ENST00000476743 KRTAP5-1Q6L8H4 278 aa3.64□□□□□ -1.83
MSL3-213ENST00000476743 PRAC1Q96KF2 57 aa3.6□□□□□ -1.83
MSL3-213ENST00000476743 LCE1EQ5T753 118 aa3.52□□□□□ -1.85
MSL3-213ENST00000476743 PRO0628Q9UI54 55 aa3.5□□□□□ -1.85
MSL3-213ENST00000476743 SVIPQ8NHG7 77 aa3.43□□□□□ -1.86
MSL3-213ENST00000476743 KTN1-AS1Q86SY8 53 aa3.35□□□□□ -1.87
MSL3-213ENST00000476743 KRTAP4-4Q9BYR3 166 aa3.31□□□□□ -1.88
MSL3-213ENST00000476743 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
MSL3-213ENST00000476743 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
MSL3-213ENST00000476743 LCE3DQ9BYE3 92 aa3.17□□□□□ -1.9
MSL3-213ENST00000476743 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
MSL3-213ENST00000476743 A0A0A0MQY5 61 aa3.01□□□□□ -1.93
MSL3-213ENST00000476743 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
MSL3-213ENST00000476743 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
MSL3-213ENST00000476743 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
MSL3-213ENST00000476743 PHGR1C9JFL3 82 aa2.54□□□□□ -2
MSL3-213ENST00000476743 NDUFAF8A1L188 74 aa2.42□□□□□ -2.02
MSL3-213ENST00000476743 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
MSL3-213ENST00000476743 PRM1P04553 51 aa2.26□□□□□ -2.05
MSL3-213ENST00000476743 INE1O15225 51 aa1.97□□□□□ -2.09
MSL3-213ENST00000476743 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
MSL3-213ENST00000476743 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 116.7 ms