RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-208ENST00000476544 C10orf95Q9H7T3 257 aa5.08□□□□□ -1.6
RAB5A-208ENST00000476544 KRTAP19-5Q3LI72 72 aa5.03□□□□□ -1.6
RAB5A-208ENST00000476544 PRR15LQ9BU68 103 aa5.02□□□□□ -1.61
RAB5A-208ENST00000476544 KRTAP19-3Q7Z4W3 81 aa5□□□□□ -1.61
RAB5A-208ENST00000476544 LCE3AQ5TA76 89 aa4.94□□□□□ -1.62
RAB5A-208ENST00000476544 UQCR11O14957 56 aa4.92□□□□□ -1.62
RAB5A-208ENST00000476544 TNP1P09430 55 aa4.91□□□□□ -1.62
RAB5A-208ENST00000476544 MT1GP13640 62 aa4.9□□□□□ -1.63
RAB5A-208ENST00000476544 DSTQ03001 7570 aaKnown RBP4.89□□□□□ -1.63
RAB5A-208ENST00000476544 MT1LQ93083 61 aa4.88□□□□□ -1.63
RAB5A-208ENST00000476544 MIR22HGQ0VDD5 57 aa4.84□□□□□ -1.63
RAB5A-208ENST00000476544 Q1T7F1 81 aa4.84□□□□□ -1.63
RAB5A-208ENST00000476544 MT1MQ8N339 61 aa4.83□□□□□ -1.64
RAB5A-208ENST00000476544 PSPHP1O15172 72 aa4.82□□□□□ -1.64
RAB5A-208ENST00000476544 KRTAP4-3Q9BYR4 195 aa4.79□□□□□ -1.64
RAB5A-208ENST00000476544 V9GYY9 64 aa4.76□□□□□ -1.65
RAB5A-208ENST00000476544 PP632Q6XCG6 107 aa4.75□□□□□ -1.65
RAB5A-208ENST00000476544 KRTAP12-3P60328 96 aa4.73□□□□□ -1.65
RAB5A-208ENST00000476544 KRTAP25-1Q3LHN0 102 aa4.68□□□□□ -1.66
RAB5A-208ENST00000476544 RPS28P62857 69 aaKnown RBP4.67□□□□□ -1.66
RAB5A-208ENST00000476544 PCP4P48539 62 aa4.65□□□□□ -1.67
RAB5A-208ENST00000476544 K7ERS5 55 aa4.61□□□□□ -1.67
RAB5A-208ENST00000476544 A6NED7 52 aa4.59□□□□□ -1.67
RAB5A-208ENST00000476544 KRTAP5-4Q6L8H1 288 aa4.59□□□□□ -1.67
RAB5A-208ENST00000476544 KRTAP23-1A1A580 65 aa4.54□□□□□ -1.68
RAB5A-208ENST00000476544 MT4P47944 62 aa4.52□□□□□ -1.69
RAB5A-208ENST00000476544 HMCN1Q96RW7 5635 aa4.52□□□□□ -1.69
RAB5A-208ENST00000476544 GPR98Q8WXG9 6306 aa4.47□□□□□ -1.69
RAB5A-208ENST00000476544 H3BS24 57 aa4.46□□□□□ -1.7
RAB5A-208ENST00000476544 KRTAP15-1Q3LI76 137 aa4.46□□□□□ -1.7
RAB5A-208ENST00000476544 KRTAP5-5Q701N2 237 aaPredicted RBP4.46□□□□□ -1.7
RAB5A-208ENST00000476544 ROMO1P60602 79 aa4.43□□□□□ -1.7
RAB5A-208ENST00000476544 CDC42SE1Q9NRR8 79 aa4.43□□□□□ -1.7
RAB5A-208ENST00000476544 LCE3CQ5T5A8 94 aa4.39□□□□□ -1.71
RAB5A-208ENST00000476544 KRTAP20-2Q3LI61 65 aa4.29□□□□□ -1.72
RAB5A-208ENST00000476544 SYNE1Q8NF91 8797 aaKnown RBP4.29□□□□□ -1.72
RAB5A-208ENST00000476544 AHNAK2Q8IVF2 5795 aa4.29□□□□□ -1.72
RAB5A-208ENST00000476544 SPRR5A0A1B0GTR4 108 aa4.26□□□□□ -1.73
RAB5A-208ENST00000476544 KRTAP9-6A8MVA2 160 aa4.24□□□□□ -1.73
RAB5A-208ENST00000476544 KRTAP5-10Q6L8G5 202 aa4.24□□□□□ -1.73
RAB5A-208ENST00000476544 KRTAP12-4P60329 112 aa4.22□□□□□ -1.73
RAB5A-208ENST00000476544 KRTAP6-1Q3LI64 71 aa4.15□□□□□ -1.75
RAB5A-208ENST00000476544 MT1AP04731 61 aa4.12□□□□□ -1.75
RAB5A-208ENST00000476544 KRTAP5-7Q6L8G8 165 aa4.04□□□□□ -1.76
RAB5A-208ENST00000476544 KRTAP5-2Q701N4 177 aa4.03□□□□□ -1.76
RAB5A-208ENST00000476544 BRK1Q8WUW1 75 aa4.02□□□□□ -1.77
RAB5A-208ENST00000476544 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
RAB5A-208ENST00000476544 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.91□□□□□ -1.78
RAB5A-208ENST00000476544 PMAIP1Q13794 54 aa3.8□□□□□ -1.8
RAB5A-208ENST00000476544 KRTAP5-8O75690 187 aa3.79□□□□□ -1.8
RAB5A-208ENST00000476544 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
RAB5A-208ENST00000476544 MT3P25713 68 aa3.75□□□□□ -1.81
RAB5A-208ENST00000476544 KRTAP5-11Q6L8G4 156 aa3.74□□□□□ -1.81
RAB5A-208ENST00000476544 PRAC1Q96KF2 57 aa3.72□□□□□ -1.81
RAB5A-208ENST00000476544 KRTAP5-1Q6L8H4 278 aa3.62□□□□□ -1.83
RAB5A-208ENST00000476544 PRO0628Q9UI54 55 aa3.55□□□□□ -1.84
RAB5A-208ENST00000476544 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
RAB5A-208ENST00000476544 MUC5ACP98088 5654 aa3.53□□□□□ -1.85
RAB5A-208ENST00000476544 AHNAKQ09666 5890 aaKnown RBP3.51□□□□□ -1.85
RAB5A-208ENST00000476544 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
RAB5A-208ENST00000476544 KTN1-AS1Q86SY8 53 aa3.36□□□□□ -1.87
RAB5A-208ENST00000476544 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
RAB5A-208ENST00000476544 LCE1BQ5T7P3 118 aa3.22□□□□□ -1.89
RAB5A-208ENST00000476544 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
RAB5A-208ENST00000476544 SVIPQ8NHG7 77 aa3.21□□□□□ -1.9
RAB5A-208ENST00000476544 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
RAB5A-208ENST00000476544 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
RAB5A-208ENST00000476544 LUZP6Q538Z0 58 aa2.97□□□□□ -1.93
RAB5A-208ENST00000476544 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
RAB5A-208ENST00000476544 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
RAB5A-208ENST00000476544 A0A0A0MQY5 61 aa2.61□□□□□ -1.99
RAB5A-208ENST00000476544 NDUFAF8A1L188 74 aa2.5□□□□□ -2.01
RAB5A-208ENST00000476544 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
RAB5A-208ENST00000476544 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
RAB5A-208ENST00000476544 PRM1P04553 51 aa2.29□□□□□ -2.04
RAB5A-208ENST00000476544 INE1O15225 51 aa1.95□□□□□ -2.1
RAB5A-208ENST00000476544 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
RAB5A-208ENST00000476544 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 54.2 ms